KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:30:56 2014 Check: 00 .. Name: ENSP00000366157/1-440 Len: 440 Check: 8493 Weight: 1.00 Name: ENSBTAP00000006985/1-440 Len: 440 Check: 5411 Weight: 1.00 Name: ENSTTRP00000003699/1-440 Len: 440 Check: 5550 Weight: 1.00 Name: bmy_19002T0/1-326 Len: 440 Check: 3548 Weight: 1.00 Name: BACU017470/1-439 Len: 440 Check: 3681 Weight: 1.00 // 1 50 ENSP00000366157/1-440 MGGLRLLAVA LTCCWWPQGS QGKTLRGSFS STAAQDAQGQ RIGHFEFHGD ENSBTAP00000006985/1-440 MRGLRLLAVA LTCCWWPPGS QGKTLRGSFS SAAARDAQGQ SIGHFEFHGD ENSTTRP00000003699/1-440 MGGLRLLAVA FTCCWWPPGS QGKTLRGSFS SAAARDAQGQ SIGHFEFHGD bmy_19002T0/1-326 MGGLRLLAVA LTCCWWPPGS QGKTLRGSFS SAAARDAHGQ SIGHFEFHGD BACU017470/1-439 MGGLRLLAVA LTCCWWPPGS QGKTLRGSFS SAAARDAHGQ SIGHFEFHGD 51 100 ENSP00000366157/1-440 HALLCVRINN IAVAVGKEAK LYLFQAQEWL KLQQSSHGYS CSEKLSKAQL ENSBTAP00000006985/1-440 HALLCVRINN IAVAVGKEAK LYLFQAQEWL KLQEGGPEYS CSEKLSKAQL ENSTTRP00000003699/1-440 HALLCVRIND IAVAIGKEAK LYLFQAQEWL KLQESGHGYS CSKKLSKAQL bmy_19002T0/1-326 HALLCVRIND IAVAIGKEAK LYLFQAQEWL KLQESGHGYS CSEKLSKAQL BACU017470/1-439 HALLCVRIND IAVAIGKEAK LYLFQAQEWL KLQESGHGYS CSEKLSKAQL 101 150 ENSP00000366157/1-440 TMTMNQTEHN LTVSQIPSPQ TWHVFYADKY TCQDDKENSQ VEDIPFEMVL ENSBTAP00000006985/1-440 TMAVNQTEHN LTVSQIPYPQ KWHVFYADKY TCREGGEESQ MEDVPFEMML ENSTTRP00000003699/1-440 TIAMNQTEHN LTVSQIPYPQ MWHVFYADKY TCKEDNENSQ VEDIPFEMML bmy_19002T0/1-326 T--------- ---------- ---------- ---------- ---------- BACU017470/1-439 T-TMNQTEHS LTVSQIPYPQ TWHVFYADKY TCKEDNENSQ VEDIPFEMML 151 200 ENSP00000366157/1-440 LNPDAEGNPF DHFSAGESGL HEFFFLLVLV YFVIACIYAQ SLWQAIKKGG ENSBTAP00000006985/1-440 LNPDAEGNPF DHFSAGESGL HEFFFLLVLV YFVIACIYAQ SLWQAIKKGG ENSTTRP00000003699/1-440 LNPDAEGNPF DHFSAGESGL HEFFFLLVLV YFVIACIYAQ SLWQAIKKGG bmy_19002T0/1-326 ---------- --------RL HEFFFLLVLV YFVIACIYAQ SLWQAIKKGG BACU017470/1-439 LNPDAEGNPF DHFSAGESGL HEFFFLLVLV YFVIACIYAQ SLWQAIKKGG 201 250 ENSP00000366157/1-440 PMHMILKVLT TALLLQAGSA LANYIHFSSY SKDGIGVPFM GSLAEFFDIA ENSBTAP00000006985/1-440 PMHMVLKVLT TALLLQAGSA FANYIHFSSY SKDGIGVPFM GSLAEFFDIA ENSTTRP00000003699/1-440 PMHVVLKVLT TALLLQAGSA FANYIHFSSY SKDGIGVPFM GSLAEFFDIA bmy_19002T0/1-326 PMHVVLKVLT TALLLQAGSA FANYIHFSSY SKDGIGVPFM GSLAE----- BACU017470/1-439 PMHVVLKVLT TALLLQAGSA FANYIHFSSY SKDGIGVPFM GSLAEFFDIA 251 300 ENSP00000366157/1-440 SQIQMLYLLL SLCMGWTIVR MKKSQSRPLQ WDSTPASTGI AVFIVMTQSV ENSBTAP00000006985/1-440 SQIQMLYLLL SLCMGWTIVR MKKSQSRPLQ WDSTPASTGI AVFMVITQSI ENSTTRP00000003699/1-440 SQIQMLYLLL SLCMGWTIVR MKKSQSRPLQ WDSTPASTGI AVFIVITQSI bmy_19002T0/1-326 ---------- ---------- ---------- -SSFPCS--- --------SI BACU017470/1-439 SQIQMLYLLL SLCMGWTIVR MKKSQSRPLQ WDSTPASTGI AVFIVITQSI 301 350 ENSP00000366157/1-440 LLLWEQFEDI SHHSYHSHHN LAGILLIVLR ICLALSLGCG LYQIITVERS ENSBTAP00000006985/1-440 LLLWEQFEET SSHSHHSHHS LAGILLIVLR ICLALSLGCG LYQIITVERS ENSTTRP00000003699/1-440 LLLWEQFEDT SPHSHHSHHN LAGILLIVLR ICLALSLGCG LYQIITVERS bmy_19002T0/1-326 LLLWEQFEDT SPHSHHSHHN LAGILLIVLR ICLALSLGCG LYQIITVERS BACU017470/1-439 LLLWEQLEDT SPHSHHSHHN LAGILLIVLR ICLALSLGCG LYQIITVERS 351 400 ENSP00000366157/1-440 TLKREFYITF AKGCILWFLC HPVLACISVI FSDYQRDKVI TIGVILCQSV ENSBTAP00000006985/1-440 TLKREFYITF AKGCILWFLC HPGLACISVI FDDYQRDKVI TIGVILCQSV ENSTTRP00000003699/1-440 TLKREFYITF AKGCILWFLC HPGLACISII FNDYQRDKVI TVGVILCQSV bmy_19002T0/1-326 TLKREFYITF AKGCILWFLC HPGLACISII FNDYQRDKVI TVGVILCQSV BACU017470/1-439 TLKREFYITF AKGCILWFLC HPGLACISII FNDYQRDKVI TVGVILCQSV 401 450 ENSP00000366157/1-440 SMVILYRLFL SHSLYWEVSS LSSVTLPLTI SSGHKSRPHF ENSBTAP00000006985/1-440 AMVILYRLFL SHSLYWEVSS LSSVTLPLTI SSGHKTRPHF ENSTTRP00000003699/1-440 SMVILYRLFL SHSLYWEVSS LSSVTLPLTI SSGHKSRPHF bmy_19002T0/1-326 SMVILYRLFL SHSLYWEVSS LSSVTLPLTI SSGHKSRPHF BACU017470/1-439 SMVILYRLFL SHSLYWEVSS LSSVTLPLTI SSGHKSRPHF