KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:30:57 2014 Check: 00 .. Name: ENSTTRP00000014235/1-577 Len: 604 Check: 656 Weight: 1.00 Name: ENSBTAP00000006986/1-599 Len: 604 Check: 8956 Weight: 1.00 Name: bmy_21878T0/1-572 Len: 604 Check: 9404 Weight: 1.00 Name: BACU010307/1-580 Len: 604 Check: 774 Weight: 1.00 // 1 50 ENSTTRP00000014235/1-577 MTAAPPSPQQ IRDRLLQAID PQSNIRNMVA VQEVISSLEK YPITKEALEE ENSBTAP00000006986/1-599 MTAAPPSPQQ IRDRLLQAID PQSNIRNMVA VQEVISSLEK YPITKEALEE bmy_21878T0/1-572 ---------- ---------- -------MVA VQEVISSLEK YPITKEALEE BACU010307/1-580 ---------- ---------- ----IRNMVA VQEVISSLEK YPITKEALEE 51 100 ENSTTRP00000014235/1-577 TRLGKLINDV RKKTKNEELA KRAKKLLRSW QKLIEPVHQN EAALRGLAGA ENSBTAP00000006986/1-599 TRLGKLINDV RKKTKNEELA KRAKKLLRSW QKLIEPVHQN EAALRGLAGA bmy_21878T0/1-572 TRLGKLINDV RKKTKNEELA KRAKKLLRSW QKLIEPVHQN EAALRGLAGA BACU010307/1-580 TRLGKLINDV RKKTKNEELA KRAKKLLRSW QKLIEPVHQN EAALRGLAGA 101 150 ENSTTRP00000014235/1-577 PGSANGGAHN CRPEAGAGGP PKSIHDLKNR NDIQRLPGQR LDRLGSRKRR ENSBTAP00000006986/1-599 PGSANGGAHN CRPEAGAAGP PKSVHDLKYR NDMPRLCGQR LDRLGSRKRR bmy_21878T0/1-572 PGSANGGAHN CRPEAGVAGP PKSIHDLKNR NDIQRLPGQR LDRLGSRKRR BACU010307/1-580 PGSANGGAHN CRPEAGVAGP PKSIHDLKNR NDIQRLPGQR LDRLGSRKRR 151 200 ENSTTRP00000014235/1-577 GDQRDLGHPG PPPRVSKVSH DSLVANSSPL PTNGISGSPE SFPGPLDSSG ENSBTAP00000006986/1-599 GDQRDLGHPG PPPKVSKASH DSLVPNSSPL PTNGISGSPE SFPSPLDSSG bmy_21878T0/1-572 GDQRDLGHPG PPPKVSKVSH DSLVANSSPL PTNGISGSPE SFPGPLDGSG BACU010307/1-580 GDQRDLGHPG PPPKVSKVSH DSLVANSSPL PTNGISGSPE SFPGPLDGSG 201 250 ENSTTRP00000014235/1-577 HVGPEGSRLE HSENDKHSGK IPVNAVRPHT SSPGLGKPPR PCLQTKAVVL ENSBTAP00000006986/1-599 HVGPEGNRLE HGENDKHSGK IPVNAVRPHT SSPGLGKPPG PCLQTKAVVL bmy_21878T0/1-572 HVGPEGSRLE HSENDKHSGK IPVNAVRPHT SSPGLGKPPG PCLQTKAAVL BACU010307/1-580 HVGPEGSRLE HSENDKHSGK IPVNAVRPHT SSPGLGKPPG PCLQTKAAVL 251 300 ENSTTRP00000014235/1-577 QXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXS- ENSBTAP00000006986/1-599 QQLDKVDETP GPPHPKGPPR CSLGSRNSRH EGSFARQRSP YTYKGSLPSP bmy_21878T0/1-572 QQLDRVDETP GPPHPKGPPR CSFSPRNSRH EGSFARQRSP YTYKGSVPSP BACU010307/1-580 QQLDRVDETP GPPHPKGPPR CSFSPRNSRH EGSFARQRSP YTYKGSVPSP 301 350 ENSTTRP00000014235/1-577 --RP------ ---------- ---PPVRRLE LLPSAESPVR WLEQPEGHQR ENSBTAP00000006986/1-599 SPRPQSLDAT QVPSPLPLAQ PSTPPVRRLE LLPSAESPVR WLEQPEGHQR bmy_21878T0/1-572 SPRPQSLDAT QVPSPLPLAQ PSTPPVRRLE LLPSAESPVR WLEQPEGHQR BACU010307/1-580 SPRPQSLDAT QVPSPLPLAQ PSTPPVRRLE LLPSAESPVR WLEQPEGHQR 351 400 ENSTTRP00000014235/1-577 LAGSGCKA-- ---GLPPAEP LLPRAGFSPD SSKADSDAAS SGGSDSKKKK ENSBTAP00000006986/1-599 LAGLGCKA-- ---GLPPAEP LLPRAGFSPD SSKADSDAAS SGGSDSKKKK bmy_21878T0/1-572 LAGSGCKA-- ---GLPPAEP LLPRAGFSPD SSKADSDAAS SGGSDSKKKK BACU010307/1-580 LAGAGCTGGA PPAGLPPAEP LLPRAGFSPD SSKADSDAAS SGGSDSKKKK 401 450 ENSTTRP00000014235/1-577 RYRPRDYTVN LDGQVAEAGV KPVRLKERKL TFDPMTRQIK PLTQKEPVRA ENSBTAP00000006986/1-599 RYRPRDYTVN LDGQVAEAGV KPVRLKERKL TFDPMTRQIK PLTQKEPVRA bmy_21878T0/1-572 RYRPRDYTVN LDGQVAEAGV KPVRLKERKL TFDPMTRQIK PLTQKEPVRA BACU010307/1-580 RYRPRDYTVN LDGQVAEAGV KPVRLKERKL TFDPMTRQIK PLTQKEPVRA 451 500 ENSTTRP00000014235/1-577 DSPVHTEQPR TELDKPEAKA SLQSPFEQTN WKELSRNEII QSYLSQQSSL ENSBTAP00000006986/1-599 DSPVHTEQPR TELDKPEAKA SLQSPFEQTN WKELSRNEII QSYLSRQSSL bmy_21878T0/1-572 DSPVHTEQXR TELDKPEAKA SLQSPFEQTN WKELSRNEII QSYLSRQSSL BACU010307/1-580 DSPVHTEQPR TELDKPEAKA SLQSPFEQTN WKELSRNEII QSYLSRQSSL 501 550 ENSTTRP00000014235/1-577 LSSSGAQTPG AHHFMSEYLK QEESTRRGAR KRHVLVAHSP PTDLPGLSRE ENSBTAP00000006986/1-599 LSSSGAQTPG AHHFMSEYLK QEESTRRGAR KPHVLVPHGP PTDFPGLSRE bmy_21878T0/1-572 LSSSGAQTPG AHHFMSEYLK QEESTRRGAR KPHVLVPHGP PTDLPGLSRE BACU010307/1-580 LSSSGAQTPG AHHFMSEYLK QEESTRRGAR KPHVLVPHGP PTDLPGLSRE 551 600 ENSTTRP00000014235/1-577 VTQDDLNRIQ AHQWPGVNGC HDTQGNWYDW TQCISLDPHG DDGRLNILPY ENSBTAP00000006986/1-599 VTRDDLDKIQ AHQWPGVNGC QDTQGNWYDW TQCISLDPHG DDGRLNILPY bmy_21878T0/1-572 VTQDDLDRIQ AHQWPGVNGC QDTQGNWYDW TQCISLDPHG DDGRLNILPY BACU010307/1-580 VTQDDLDRIQ AHQWPGVNGC QDTQGNWYDW TQCISLDPHG DDGRLNILPY 601 650 ENSTTRP00000014235/1-577 VCLD ENSBTAP00000006986/1-599 VCLD bmy_21878T0/1-572 VCLD BACU010307/1-580 VCLD