KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:09 2014 Check: 00 .. Name: bmy_11455T0/1-194 Len: 272 Check: 9151 Weight: 1.00 Name: ENSP00000356807/1-272 Len: 272 Check: 1328 Weight: 1.00 Name: BACU004247/1-231 Len: 272 Check: 2117 Weight: 1.00 Name: ENSTTRP00000013479/1-272 Len: 272 Check: 9390 Weight: 1.00 Name: ENSBTAP00000007093/1-242 Len: 272 Check: 3230 Weight: 1.00 // 1 50 bmy_11455T0/1-194 MMIHGFQSSH QDFSFGPWKL TASKTHIMKS ADVEKLADEL HMPSLPEMMF ENSP00000356807/1-272 MMIHGFQSSH RDFCFGPWKL TASKTHIMKS ADVEKLADEL HMPSLPEMMF BACU004247/1-231 ---------- ---------- ---------- ---------- -MPSLPEMMF ENSTTRP00000013479/1-272 MMIHGFQSSH QDFSFGPWKL TASKTHIMKS ADVEKLADEL HMPSLPEMMF ENSBTAP00000007093/1-242 ---------- ------MWKY ---------- ----RLADEL HMPSLPEMMF 51 100 bmy_11455T0/1-194 GDNVLRIQHG SGFGIEFNAT DALRCVNNYQ GMLKVACAEE WQESRTEGEH ENSP00000356807/1-272 GDNVLRIQHG SGFGIEFNAT DALRCVNNYQ GMLKVACAEE WQESRTEGEH BACU004247/1-231 GDNVLRIQHG SGFGIEFNAT DALRCVNNYQ GMLKVACAEE WQESRTEGEH ENSTTRP00000013479/1-272 GDNVLRIQHG SGFGIEFNAT DALRCVNNYQ GMLKVACAEE WQESRTEGEH ENSBTAP00000007093/1-242 GDNVLRIQHG SGFGIEFNAT DALRCVNNYQ GMLKVACAEE WQESRTEGEH 101 150 bmy_11455T0/1-194 SKEVVKPYDW TYTTDYKGTL LGESLKLKVV PTTDHIDTEK LKAREQIKFF ENSP00000356807/1-272 SKEVIKPYDW TYTTDYKGTL LGESLKLKVV PTTDHIDTEK LKAREQIKFF BACU004247/1-231 SKEVVKPYDW TYTTDYKGTL LGESLKLKVV PTTDHIDTEK LKAREQIKFF ENSTTRP00000013479/1-272 SKEVIKPYDW TYTTDYKGTL LGESLKLKVV PTTDHIDTEK LKAREQIKFF ENSBTAP00000007093/1-242 SKEVIKPYDW TYTTDYKGTL LGESLKLKVV PTTDHIDTEK LKAREQIKFF 151 200 bmy_11455T0/1-194 EEVLLFEDEL HDHGVSSLSV KIVSIVNVFK INFFYF---- ---------- ENSP00000356807/1-272 EEVLLFEDEL HDHGVSSLSV KIRVMPSSFF LLLRFFLRID GVLIRMNDTR BACU004247/1-231 EEVLLFEDEL HDHGVSSLSV KIRVMPSSFF LLWWFFLRID GVLIRMNDTR ENSTTRP00000013479/1-272 EEVLLFEDEL HDHGVSSLSV KIRVMPSSFF LLLRFFLRID GVLIRMNDTR ENSBTAP00000007093/1-242 EEVLLFEDEL HDHGVSSLSV KIRVMPSSFF LLLRFFLRID GVLIRMNDTR 201 250 bmy_11455T0/1-194 -YH------- ---------- ---------- ---------- WSEIQD---- ENSP00000356807/1-272 LYHEADKTYM LREYTSRESK ISSLMHVPPS LFTEPNEISQ YLPIKEAVCE BACU004247/1-231 LYHEADKTYM LREYTSRESK IANLMHVSPS LFTEPNEISQ YLPIKEAVCE ENSTTRP00000013479/1-272 LYHEADKTYM LREYTSRESK IANLMHVSPS LFTEPNEISQ YLPIKEAVCE ENSBTAP00000007093/1-242 LYHEADKTYM LREYTSRESK IANLMHVSPS LFTEPNEISQ YLPIKEAVCE 251 300 bmy_11455T0/1-194 ---------- ---------- -- ENSP00000356807/1-272 KLIFPERIDP NPADSQKSTQ VE BACU004247/1-231 KLIFPERIDP NPADSKECTP VE ENSTTRP00000013479/1-272 KLIFPERIDP NPADSKECTP VE ENSBTAP00000007093/1-242 KLIFPERIDP NPADSKECTP VE