KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:09 2014 Check: 00 .. Name: ENSTTRP00000001585/1-623 Len: 641 Check: 4846 Weight: 1.00 Name: ENSP00000416707/1-641 Len: 641 Check: 4463 Weight: 1.00 Name: ENSBTAP00000007096/1-387 Len: 641 Check: 7634 Weight: 1.00 Name: bmy_09207T0/1-461 Len: 641 Check: 295 Weight: 1.00 Name: BACU015253/1-395 Len: 641 Check: 6903 Weight: 1.00 // 1 50 ENSTTRP00000001585/1-623 MAAKSDGGGV GVGFAQLHN- DEAVGSGGKK NGXXXXXXXX XXXXXXXXXX ENSP00000416707/1-641 MAAKSDGGGV GVGFAQLHNL DEAVGSGGEE DGEPGGGGCG GGGDGSEPGE ENSBTAP00000007096/1-387 ---------- ---------- ---------- ---------- ---------- bmy_09207T0/1-461 ---------- ---------- ---------- ---------- ---------- BACU015253/1-395 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001585/1-623 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XNQPLQPPGA ENSP00000416707/1-641 SSSMHICHCC NTSSCYWGCR SACLRSLLGR KPRRSAAADG GDQPLQPPAA ENSBTAP00000007096/1-387 ---------- ---------- ---------- ---------- ---------- bmy_09207T0/1-461 ---------- ---------- ---------- -------MKG GNTLLRC--- BACU015253/1-395 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000001585/1-623 --AGRHPPTP SAERPQ--PP QVERPWLDCL WIVLALLVFF GDVGTDLWLA ENSP00000416707/1-641 PGAGRQPPTP SAARPEPPPP QVERPWLDCL WIVLALLVFF GDVGTDLWLA ENSBTAP00000007096/1-387 ---------- ---------- ---------- ---------- ---------- bmy_09207T0/1-461 ---------- ---------- ---------- ---------- ------VRFS BACU015253/1-395 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000001585/1-623 LDYYRKGDYV YFGLTLSFVL VPSLLVQSLS FRWFVQDYTG GGLGAVEGLS ENSP00000416707/1-641 LDYYRKGDYV YFGLTLFFVL VPSLLVQSLS FRWFVQDYTG GGLGAVEGLT ENSBTAP00000007096/1-387 ---------- ---------- ---------- ---------- ---------- bmy_09207T0/1-461 VQLYLNLPFQ RAGGSARVAF FPGQLSVDTA VLFLLGEAGT LRLGVTFSAE BACU015253/1-395 ---------- -------LCS VPS------- ----LGR--- ---------- 201 250 ENSTTRP00000001585/1-623 SRGPPMMGAV YGHGAG---- ---VPATPGA QRLCRLSVWI WLSVIHLLQM ENSP00000416707/1-641 SRGPPMMGAG YVHGAARGGP GVRVSPTPGA QRLCRLSVWI WQSVIHLLQM ENSBTAP00000007096/1-387 ---------- ---------- ---------- ---------- ---------- bmy_09207T0/1-461 RLVPCGIEEK ---------- ---------- ---------- ---------- BACU015253/1-395 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000001585/1-623 GQVWRYIRTM YLGIQSQRQK EHQRRFYWAM MYEYADVNML RLLETFLESA ENSP00000416707/1-641 GQVWRYIRTM YLGIQSQRRK EHQRRFYWAM MYEYADVNML RLLETFLESA ENSBTAP00000007096/1-387 ----RYIRTM YLGIQSQRQK EHQRRFYWAM MYEYADVNML RLLETFLESA bmy_09207T0/1-461 ----EYIRTM YLGIQSQRQK EHQRRFYWAM MYEYADVNML RLLETFLESA BACU015253/1-395 -----YIRTM YLGIQSQRQK EHQRRFYWAM MYEYADVNML RLLETFLESA 301 350 ENSTTRP00000001585/1-623 PQLVLQLCIM IQKSRAETLP -VSSVTSLMS LAWVLASYHK LLRDSRDDKK ENSP00000416707/1-641 PQLVLQLYIM LQKNSAETLP CVSSVTSLMS LAWVLASYHK LLRDSRDDKK ENSBTAP00000007096/1-387 PQLVLQLCIM IQKSRAETLP CVSSVTSLMS LAWVLASYHK LLRDSRDDKK bmy_09207T0/1-461 PQLVLQLCIM IQKSRAETLP CVSSVTSLMS LAWVLASYHK LLRDSRDDKK BACU015253/1-395 PQLVLQLCIM IQKSRAETLP CVSSVTSLMS LAWVLASYHK LLRDSRDDKK 351 400 ENSTTRP00000001585/1-623 SMSYRGALIH LFWRLFTISS RVLSFALFAS IFQLYFGIFV VVHWCAMAFW ENSP00000416707/1-641 SMSYRGAIIQ VFWRLFTISS RVISFALFAS IFQLYFGIFV VVHWCAMAFW ENSBTAP00000007096/1-387 SMSYRGALIH LFWRLFTISS RVISFALFAS IFQLYFGIFV VVHWCAMAFW bmy_09207T0/1-461 SMSYRGAVIH LFWRLFTISS RVLSFALFAS IFQLYFGIFV VVHWCAMAFW BACU015253/1-395 SMSYRGAVIH LFWRLFTISS RVLSFALFAS IFQLYFGIFV VVHWCAMAFW 401 450 ENSTTRP00000001585/1-623 IIHGGTDFCM SKWEEILFNM VVGIVYIFCW FNVKEGRTRY RMFAYYTIVL ENSP00000416707/1-641 IIHGGTDFCM SKWEEILFNM VVGIVYIFCW FNVKEGRTRY RMFAYYTIVL ENSBTAP00000007096/1-387 IIHGGTDFCM SKWEEILFNM VVGIVYIFCW FNVKEGRTRY RMFAYYTIVL bmy_09207T0/1-461 IIHGGTDFCM SKWEEILFNM VVGIVYIFCW FNVKEGRTRY RMFAYYTIVL BACU015253/1-395 IIHGGTDFCM SKWEEILFNM VVGIVYIFCW FNVKEGRTRY RMFAYYTIVL 451 500 ENSTTRP00000001585/1-623 TENAALTFLW YFYRDPETTD SFAVPALCCV FISFVAGIAL MLLYYGVLHP ENSP00000416707/1-641 TENAALTFLW YFYRDPETTD SYAVPALCCV FISFVAGIAM MLLYYGVLHP ENSBTAP00000007096/1-387 TENAALTFLW YFYRNPETTD SYAVPALCCV FISFVAGIAL MLLYYGVLHP bmy_09207T0/1-461 TENAALTFLW YFYRDPETTD SFAVPALCCV FISFVAGIAV MLLYYGVLHP BACU015253/1-395 TENAALTFLW YFYRDPETTD SFAVPALCCV FISFVAGIAV MLLYYGVLHP 501 550 ENSTTRP00000001585/1-623 TGPR-KILAS SCCAELLWGI PL-PDVEPMX XXXXXXXXXX XXXXXXXXXX ENSP00000416707/1-641 TGPRAKILAS SCCAELLWGI PLPPDVEPMA PEIPGYRGTQ VTPTRAVTEQ ENSBTAP00000007096/1-387 TGPRVKILAS SCCAELLWGI PLPPDVEPMA PQTPGYRGTQ VTPTRAVTEQ bmy_09207T0/1-461 TGPRAKVLAS SCCAELLWGI PLPPDVEPMA PQTPGYRGTQ VTPTRAVTEQ BACU015253/1-395 TGPRAKLLVS SCCAELLWGI PLPPDVEPMA PQTPGYRGTQ VTPTRAVTEQ 551 600 ENSTTRP00000001585/1-623 XXXXXXXXXX XXXXXXXXXX XTPLGRPYSP EGPLIRIDMP RKRYPAWDA- ENSP00000416707/1-641 QEDLTADTCL PVFQVRPMGP PTPLGRPYLP EGPLIKIDMP RKRYPAWDAH ENSBTAP00000007096/1-387 QEDLTADTCL PVFQVRPMGP STPTGRPYLP EGPLIKIDMP RKRYPAWDAH bmy_09207T0/1-461 QEDLTADTCL PVFQVRPMGP STPLGRPYHP EGPLIKIDMP RKRYPAWDAH BACU015253/1-395 QEDLTADTCL PVFQVRPMGP STPLGRPYHP EGPLIKIDMP RKRYPAWDAH 601 650 ENSTTRP00000001585/1-623 FVDR--RRRT NILQYVTPAA VGIRYRDGPL LYELLQYESS L ENSP00000416707/1-641 FVDRRLRRTI NILQYVTPTA VGIRYRDGPL LYELLQYESS L ENSBTAP00000007096/1-387 FVDRRLRRTI NILQYVTPTA VGIRYRDGPL LYELLQYESS L bmy_09207T0/1-461 FVDRRLRRTI NVLQYVTPAA VGIRYRDGPL LYELLQYESS L BACU015253/1-395 FVDRRLRRTI NILQYVTPAA VGIRYRDGPL LYELLQYESS L