KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:31:11 2014 Check: 00 .. Name: ENSP00000418614/1-751 Len: 757 Check: 5138 Weight: 1.00 Name: ENSBTAP00000007133/1-755 Len: 757 Check: 5398 Weight: 1.00 Name: bmy_12895T0/1-755 Len: 757 Check: 118 Weight: 1.00 Name: ENSTTRP00000000776/1-747 Len: 757 Check: 4636 Weight: 1.00 // 1 50 ENSP00000418614/1-751 ----MPALGW AVAAILMLQT -AMAEPSPGT LPRKAGVFSD LSNQELKAVH ENSBTAP00000007133/1-755 MGREALALGW ASAAILVLQT LAAAEGAPQT PGDKGRVFAD LSAQELKAVH bmy_12895T0/1-755 MGRKTLALGW AGAAVLVLQT LAAAEGSPRT PGNKGRVFAD LSAQELKAVH ENSTTRP00000000776/1-747 ----TLALGW AGAAILVLQT LAAAEGSPRT PGNKGRVFAD LSAQELKAVQ 51 100 ENSP00000418614/1-751 SFLWSKKELR LQPSSTTTMA KNTVFLIEML LPKKYHVLRF LDKGERHPVR ENSBTAP00000007133/1-755 SFLWSQKELR LEPSNTLTVA KNSVFLIEML LPKKQHVLKF LDKGHRPPVR bmy_12895T0/1-755 SFLWSQKELR LQPPSTLTMA KNSVFLIEML LPKKQHVLKF LDKGHRPPVR ENSTTRP00000000776/1-747 GFLWSQKELS LQPTSTLTMA KNSVFLIEML LXXXXXXXXX XXXXXXXXXX 101 150 ENSP00000418614/1-751 EARAVIFFGD QEHPNVTEFA VGPLPGPCYM RALSPRPGYQ SSWASRPIST ENSBTAP00000007133/1-755 EARAIIFFGA QEQPNITEFA VGPLPRPRYL RHLPPRPRHQ ASWASRPISK bmy_12895T0/1-755 EARAVIFFGA QERPNITEFA VGPLPRPHYM RHLPHKPGHQ ASWASRPISK ENSTTRP00000000776/1-747 XXXXXXXXXX XXXXXXTEFA VGH-PRPHYM R-LPHKPGHQ A-WASRPMSK 151 200 ENSP00000418614/1-751 AEYALLYHTL QEATKPLHQF FLNTTGFSFQ DCHDRCLAFT DVAPRGVASG ENSBTAP00000007133/1-755 AEYALLSHTL EEATKPLRAF FWRTAGAVFG NCSQRCLTFT DVAPRGVASG bmy_12895T0/1-755 AEYTLLSHTL EEASKPLHQF FRRTTGFMFG HCHERCLTFT DVAPRGLASG ENSTTRP00000000776/1-747 AEYSLMSHTL EEASKPVHQF FHHTTGFTL- ECHERCLTFT DVAPRGLASG 201 250 ENSP00000418614/1-751 QRRSWLIIQR YVEGYFLHPT GLELLVDHGS TDAGHWAVEQ VWYNGKFYGS ENSBTAP00000007133/1-755 QRRSWFILQL QIEGYFLHPT GMELLLDHGS PNPRDWTVER VWYNGRFYRS bmy_12895T0/1-755 QRRSWFILQR HMEGYFLHPT GLELLVDHAS TNPQDWTVEQ VWYNGKFYRS ENSTTRP00000000776/1-747 QRRSWFILQR HMEGYFLHPT GLELLVDHAS TNPQDWTVEQ VWYNGKFYRS 251 300 ENSP00000418614/1-751 PEELARKYAD GEVDVVVLED PLPGGKGHDS TEEPPLFSSH KPRGDFPSPI ENSBTAP00000007133/1-755 PEELAQKYDD GEVDAVVLED PLAKGKDGAN LPEAALFSSY QLRGDL--GV bmy_12895T0/1-755 PAELAQKYDD GEVDAVVLED PLAKDKDGES LPEAALFSFY QPRGDF--AI ENSTTRP00000000776/1-747 PAELAQKYDD GEVDAVVLAD PLAKDKDGEN LPEAALFSFY QPRGDF--AI 301 350 ENSP00000418614/1-751 HVSGPRLVQP HGPRFRLEGN AVLYGGWSFA FRLRSSSGLQ VLNVHFGGER ENSBTAP00000007133/1-755 SKSGPRLVQP QGARYSLDGH TVRYAGWSFS FRLRSSSGLQ VLDVRFGGER bmy_12895T0/1-755 TMNGPRLVQP EGPRYSLEGN TVLYGGWSFT FRLRSSSGLQ VLDVHFGGER ENSTTRP00000000776/1-747 TKNGPRLVQP EGPRYSLEDN TVLYGGWSFA FRLRSSSGLQ VLDVHFGGER 351 400 ENSP00000418614/1-751 IAYEVSVQEA VALYGGHTPA GMQTKYLDVG WGLGSVTHEL APGIDCPETA ENSBTAP00000007133/1-755 VAYEVSVQEA VALYGGHTPA GMQTKYMDVG WGLGSVTYEL APGIDCPEMA bmy_12895T0/1-755 IAYEVSVQEA VALYGGHTPA GMQTKYMDVG WGLGSVTHEL APGVDCPETA ENSTTRP00000000776/1-747 IAYEVSVQEA VALYGGHTPA GMQTKYIDVG WGLGSVTHEL APGIDCPETA 401 450 ENSP00000418614/1-751 TFLDTFHYYD ADDPVHYPRA LCLFEMPTGV PLRRHFNSNF KGGFNFYAGL ENSBTAP00000007133/1-755 TFVDALHYYD DDGPVLYPRA LCLFEMPTGV PIRRHFNSNF NGGFNFYAGL bmy_12895T0/1-755 TFLDALHYYD ADGPVLYPRA LCLFEMPTGV PIRRHFNSNF SDGFNFYAGL ENSTTRP00000000776/1-747 TFLDALHYYD ADGPVLYPRA LCLFEMPTGV PIRRHFNSNF SDGFNFYAGL 451 500 ENSP00000418614/1-751 KGQVLVLRTT STVYNYDYIW DFIFYPNGVM EAKMHATGYV HATFYTPEGL ENSBTAP00000007133/1-755 KGQALVLRTT STVYNYDYIW DFIFYPNGVM EAKMHATGYI HATFYTPEGL bmy_12895T0/1-755 KGQVLVLRTT STVYNYDYIW DFIFYPNGVM EAKMHATGYV HATFYTPEGL ENSTTRP00000000776/1-747 KGQVLVLRTT STVYNYDYIW DFIFYPNGVM EAKMHATGYV HATFYTPEGL 501 550 ENSP00000418614/1-751 RHGTRLHTHL IGNIHTHLVH YRVDLDVAGT KNSFQTLQMK LENITNPWSP ENSBTAP00000007133/1-755 RHGTRLHTHL IGNMHTHLVH YRVDLDVAGT KNSFQTLQMK LENITNPWSP bmy_12895T0/1-755 RHGTRLHTHL IGNMHTHLVH YRVDLDVAGT KNSFQTLQMK LENTTNPWSP ENSTTRP00000000776/1-747 RHGTRLHTHL LGNLHTHLVH YRVDLDVAGT KNSFQTLHMK LENITNPWSP 551 600 ENSP00000418614/1-751 RHRVVQPTLE QTQYSWERQA AFRFKRKLPK YLLFTSPQEN PWGHKRTYRL ENSBTAP00000007133/1-755 GHRLVHPALQ QMRYSRERQA AFRFGQTLPK YLLFTSPEQN PWGHQRSYRV bmy_12895T0/1-755 RHRLVQPALQ ETRYSRERQA AFSFRQTLPR YLLFTSPQEN PWGHKRSYRL ENSTTRP00000000776/1-747 RHRLVQPTLQ ETKFSRERQA AFLFRQTLPK YLLFTSPKKN PWGHKRSYRL 601 650 ENSP00000418614/1-751 QIHSMADQVL PPGWQEEQAI TWARYPLAVT KYRESELCSS SIYHQNDPWH ENSBTAP00000007133/1-755 QIHSMADQVL PPGWQEERAV TWARYPLAVT KYRESERYSS SIYNQNDPWD bmy_12895T0/1-755 QIHSMADQVL PPGWQEERAV TWARYPLAVT KYRESELRSS SIYNQNDPWD ENSTTRP00000000776/1-747 QIHSMADQVL PPGWQEERAV TWARYPLAVT KYRESELHSS SVYNQNDPWD 651 700 ENSP00000418614/1-751 PPVVFEQFLH NNENIENEDL VAWVTVGFLH IPHSEDIPNT ATPGNSVGFL ENSBTAP00000007133/1-755 PPVVFEEFLR NNENIEDEDL VAWVTVGFLH IPHAEDIPNT TTPGNSVGFL bmy_12895T0/1-755 PPVVFEEFLR NNENIEDEDL VAWVTVGFLH IPHAEDIPNT ATPGNSVGFL ENSTTRP00000000776/1-747 PPVVFEEFLH NNENIEDEDL VAWVTVGFLH IPHSEDIPNT ATPGNSVGFL 701 750 ENSP00000418614/1-751 LRPFNFFPED PSLASRDTVI VWPRDNGPNY VQRWIP-EDR DCSMPPPFSY ENSBTAP00000007133/1-755 LRPFNFFPED PSLASRDLII VRPLENGSTY TQSWMPEEEG DCLKPPSFSY bmy_12895T0/1-755 LRPFNFFPED PSLASRDLVV VWPLENGSTY VQHWIPEEDG GCLMPPPFSY ENSTTRP00000000776/1-747 LRPFNFFPED PSLASRDLVV VRPLENGSTY VQRWIPEEDG GCLMPPPFSY 751 800 ENSP00000418614/1-751 NGTYRPV ENSBTAP00000007133/1-755 NGTYRLV bmy_12895T0/1-755 NGTYRPV ENSTTRP00000000776/1-747 NGTYRPV