KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:12 2014 Check: 00 .. Name: ENSTTRP00000012889/1-440 Len: 440 Check: 4057 Weight: 1.00 Name: BACU008782/1-332 Len: 440 Check: 7216 Weight: 1.00 Name: bmy_19391T0/1-406 Len: 440 Check: 2572 Weight: 1.00 Name: ENSP00000261303/1-440 Len: 440 Check: 3065 Weight: 1.00 Name: ENSBTAP00000007135/1-440 Len: 440 Check: 3065 Weight: 1.00 // 1 50 ENSTTRP00000012889/1-440 MGQSQSGGHG PGGGKKDDKD KKKKYEPPVP TRVGKKKKKT KGPDAASKLP BACU008782/1-332 ---------- ---------- ---------- ---------- ---------- bmy_19391T0/1-406 MGQSQSGGHG PGGGKKDDKD KKKKYEPPVP TRVGKKKKKT KGPDAASKLP ENSP00000261303/1-440 MGQSQSGGHG PGGGKKDDKD KKKKYEPPVP TRVGKKKKKT KGPDAASKLP ENSBTAP00000007135/1-440 MGQSQSGGHG PGGGKKDDKD KKKKYEPPVP TRVGKKKKKT KGPDAASKLP 51 100 ENSTTRP00000012889/1-440 LVTPHTQCRL KLLKLERIKD YLLMEEEFIR NQEQMKPLEE KQEEERSKVD BACU008782/1-332 ---------- ---------- ---MEEEFIR NQEQMKPLEE KQEEERSKVD bmy_19391T0/1-406 LVTPHTQCRL KLLKLERIKD YLLMEEEFIR NQEQMKPLEE KQEEERSKVD ENSP00000261303/1-440 LVTPHTQCRL KLLKLERIKD YLLMEEEFIR NQEQMKPLEE KQEEERSKVD ENSBTAP00000007135/1-440 LVTPHTQCRL KLLKLERIKD YLLMEEEFIR NQEQMKPLEE KQEEERSKVD 101 150 ENSTTRP00000012889/1-440 DLRGTPMSVG TLEEIIDDNH AIVSTSVGSE HYVSILSFVD KDLLEPGCSV BACU008782/1-332 DLRGTPMSVG TLEEIIDDNH AIVSTSVGSE HYVSILSFVD KDLLEPGCSV bmy_19391T0/1-406 DLRGTPMSVG TLEEIIDDNH AIVSTSVGSE HYVSILSFVD KDLLEPGCSV ENSP00000261303/1-440 DLRGTPMSVG TLEEIIDDNH AIVSTSVGSE HYVSILSFVD KDLLEPGCSV ENSBTAP00000007135/1-440 DLRGTPMSVG TLEEIIDDNH AIVSTSVGSE HYVSILSFVD KDLLEPGCSV 151 200 ENSTTRP00000012889/1-440 LLNHKVHAVI GVLMDDTDPL XXXXXXXXXX XXXXADIGGL DNQIQEIKES BACU008782/1-332 LLNHKVHAVI GVLMDDTDPL VTVMKVEKAP QETYADIGGL DNQIQEIKES bmy_19391T0/1-406 LLNHKVHAVI GVLMDDTDPL VTVMKVEKAP QETYADIGGL DNQIQEIKES ENSP00000261303/1-440 LLNHKVHAVI GVLMDDTDPL VTVMKVEKAP QETYADIGGL DNQIQEIKES ENSBTAP00000007135/1-440 LLNHKVHAVI GVLMDDTDPL VTVMKVEKAP QETYADIGGL DNQIQEIKES 201 250 ENSTTRP00000012889/1-440 VELPLTHPEY YEEMGIKPPK GVILYGPPGT GKTLLAKAVA NQTSATFLRV BACU008782/1-332 VELPLTHPEY YEEMGIKPPK GVILYGPPGT GKTLLAKAVA NQTSATFLRV bmy_19391T0/1-406 VELPLTHPEY YEEMGIKPPK GVILYGPPGT GKTLLAKAVA NQTSATFLRV ENSP00000261303/1-440 VELPLTHPEY YEEMGIKPPK GVILYGPPGT GKTLLAKAVA NQTSATFLRV ENSBTAP00000007135/1-440 VELPLTHPEY YEEMGIKPPK GVILYGPPGT GKTLLAKAVA NQTSATFLRV 251 300 ENSTTRP00000012889/1-440 VGSELIQKYL GDGPKLVREL FRVAEEHAPS IVFIDEIDAI GTKRYDSNSG BACU008782/1-332 VGSELIQKYL GDGPKLVREL FRVAEEHAPS IVFIDEIDAI GTKRYDSNSG bmy_19391T0/1-406 VGSELIQKYL GDGPKLVREL FRVAEEHAPS IVFIDEIDAI GTKRNRS--- ENSP00000261303/1-440 VGSELIQKYL GDGPKLVREL FRVAEEHAPS IVFIDEIDAI GTKRYDSNSG ENSBTAP00000007135/1-440 VGSELIQKYL GDGPKLVREL FRVAEEHAPS IVFIDEIDAI GTKRYDSNSG 301 350 ENSTTRP00000012889/1-440 GEREIQRTML ELLNQLDGFD SRGDVKVIMA TNRIETLDPA LIRPGRIDRK BACU008782/1-332 GEREIQRTML ELLNQLDGFD SRGDVKVIMA TNRIETLDPA LIRPGRIDRK bmy_19391T0/1-406 -----FRLFL XVPEQR-GF- ---------- ---------- ----CRIDRK ENSP00000261303/1-440 GEREIQRTML ELLNQLDGFD SRGDVKVIMA TNRIETLDPA LIRPGRIDRK ENSBTAP00000007135/1-440 GEREIQRTML ELLNQLDGFD SRGDVKVIMA TNRIETLDPA LIRPGRIDRK 351 400 ENSTTRP00000012889/1-440 IEFPLPDEKT KKRIFQIHTS RMTLADDVTL DDLIMAKDDL SGADIKAICT BACU008782/1-332 IEFPLPDEKT KKRIFQIHTS RMTLADDVTL DDLIMAKDDL SGADIKNSSI bmy_19391T0/1-406 IEFPLPDEKT KKRIFQIHTS RMTLADDVTL DDLIMAKDDL SGADIKAICT ENSP00000261303/1-440 IEFPLPDEKT KKRIFQIHTS RMTLADDVTL DDLIMAKDDL SGADIKAICT ENSBTAP00000007135/1-440 IEFPLPDEKT KKRIFQIHTS RMTLADDVTL DDLIMAKDDL SGADIKAICT 401 450 ENSTTRP00000012889/1-440 EAGLMALRER RMKVTNEDFK KSKENVLYKK QEGTPEGLYL BACU008782/1-332 PSQSL----- ---------- ---------- ---------- bmy_19391T0/1-406 EAGLMALRER RMKVTNEDFK KSKENVLYKK QEGTPEGLYL ENSP00000261303/1-440 EAGLMALRER RMKVTNEDFK KSKENVLYKK QEGTPEGLYL ENSBTAP00000007135/1-440 EAGLMALRER RMKVTNEDFK KSKENVLYKK QEGTPEGLYL