KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:31:12 2014 Check: 00 .. Name: ENSBTAP00000007147/1-1136 Len: 1178 Check: 4600 Weight: 1.00 Name: ENSP00000346335/1-1164 Len: 1178 Check: 852 Weight: 1.00 Name: bmy_19392T0/1-1067 Len: 1178 Check: 2326 Weight: 1.00 Name: ENSTTRP00000012890/1-1165 Len: 1178 Check: 9631 Weight: 1.00 // 1 50 ENSBTAP00000007147/1-1136 ---------- ---------- -ELDWLSNPS FHVGAITSLS RHTQETTAAP ENSP00000346335/1-1164 MALFPAFAGL SEAPDGGSSR KELDWLSNPS FCVGSITSLS QQTEAAPAH- bmy_19392T0/1-1067 --MLRSFLG- --------RE LELDWLSNPS FCVGTVTSLG QQTEEATAF- ENSTTRP00000012890/1-1165 MALFPAFAGV SEEPESGSPR KELDWLSNPS FCVETITSLS QQTEEVTAF- 51 100 ENSBTAP00000007147/1-1136 VSEGSPLTRS PLKSEPSGES DANRKPKETS RKKKKEKKKK RKLQRHEKTK ENSP00000346335/1-1164 VSEGLPLTRS HLKSESSDES DTNKKLKQTS RKKKKEKKKK RKHQHHKKTK bmy_19392T0/1-1067 VSEESLLTRS PLNSEPSDES DTNRKPKQTS RKKKKEKKKK RKHQHHKKTK ENSTTRP00000012890/1-1165 VSEESLLTRS PLNSEPSDES DTNKKPKQTS RKKKKEKKKK RKHQHHKKTK 101 150 ENSBTAP00000007147/1-1136 RKHGPSGSSG SESDTDSAKD SPSRSLRDSK RESEKPNQGD DAAADAGRHC ENSP00000346335/1-1164 RKHGPSSSSR SETDTDSEKD KPSRGVGGSK KESEEPNQGN NAAADTGHRF bmy_19392T0/1-1067 RKRGQSSSSG SESYTDSEKD RSSRSIRDSK KESEKPNQEN NATADIGRHF ENSTTRP00000012890/1-1165 RKRGQSSSSG SESYTDSEKD ISSRSIRSSK KESEKPNQEN NATADIGRHF 151 200 ENSBTAP00000007147/1-1136 VWLEDIQALS GETFRMDKKP DPANWEYKSL YRGDIARYKR KGDSCLGLNP ENSP00000346335/1-1164 VWLEDIQAVT GETFRTDKKP DPANWEYKSL YRGDIARYKR KGDSCLGINP bmy_19392T0/1-1067 VWLEDIQALT GETFRTDKKP DPANWEYKSL YRGDVARYKR KGDSCLGINP ENSTTRP00000012890/1-1165 VWLEDIQALT GETFRTDKKP DPANWEYKSL YRGDVARYKR KGDSCLGINP 201 250 ENSBTAP00000007147/1-1136 KKQCISWEGN STEKKRSHKH IERYFTKKSV GLMNVDGLAV SSQPEALALE ENSP00000346335/1-1164 KKQCISWEGT STEKKHSRKQ VERYFTKKSV GLMNIDGVAI SSKTEPPSSE bmy_19392T0/1-1067 KKQCVSWEGT STEKKRSHKH VERYFTKKSV GLMNIDGVAI SSKTEPPSSE ENSTTRP00000012890/1-1165 RKQCISWEGT STEKKRSHKH VERYFTKKSV GLMNIDGIAI SSKTEPLSSE 251 300 ENSBTAP00000007147/1-1136 PLSFIPVKGV DDAAPPATSW LNPLGIYDQA TTQWLQGQGP SEQESRPPDS ENSP00000346335/1-1164 PISFIPVKDL EDAA-PVTTW LNPLGIYDQS TTHWLQGQGP PEQESKQPDA bmy_19392T0/1-1067 SISFIPVKGA EDVVSPVTTW LNPLGIYDEA TTQWLQGRGP SEQESKQPDS ENSTTRP00000012890/1-1165 SISFIPVKGA EDVVSPVTTW LNPLGIYDEA TTQWLQGRGP SEQESKQPDS 301 350 ENSBTAP00000007147/1-1136 QPDRESALLK ARVEEFNRKV RESPRDTELW MAFVAFQDEL MRSPGLYAVE ENSP00000346335/1-1164 QPDSESAALK AKVEEFNRRV RENPRDTQLW MAFVAFQDEV MKSPGLYAIE bmy_19392T0/1-1067 QPNRESVLLK AKVEEFNRRV WENPRDVQLW MAFVAFQDEV MRSPGLYAIE ENSTTRP00000012890/1-1165 EPNRENVLLK AKVEEFNRRI WENPRDIQLW MAFVAFQDEV MRSPGLYAIE 351 400 ENSBTAP00000007147/1-1136 EGEPETRKRS LRLVLEKKLA ILERAIESNP SSVDLKLAKL KLCAEFWEPA ENSP00000346335/1-1164 EGEQEKRKRS LKLILEKKLA ILERAIESNQ SSVDLKLAKL KLCTEFWEPS bmy_19392T0/1-1067 EGEQEKRKRS LRLVLEKKLA ILERAVESNP SSVDLKLAKL QLCTEFWEPS ENSTTRP00000012890/1-1165 EGQQEKRKRS LKLVLEKKLA ILERAVESNP SSVDLKLAKL QLCTEFWEPS 401 450 ENSBTAP00000007147/1-1136 TLLKEWQKLI FLHPNNTALW QKYLLFCQSQ FSTFSVSKIQ SLYGKCLSTL ENSP00000346335/1-1164 TLVKEWQKLI FLHPNNTALW QKYLLFCQSQ FSTFSISKIH SLYGKCLSTL bmy_19392T0/1-1067 TLVKEWQKLI FLHPNNTALW QKYLLFCQSQ FSTFSISKIQ SLYGKCLSTL ENSTTRP00000012890/1-1165 TLVKEWQKLI FLHPNNTALW QKYLLFCQSQ FSTFSISKIQ SLYGKCLSTL 451 500 ENSBTAP00000007147/1-1136 SAVRDGSIVS HPELPGTEEA MF-------- ----ALFLQQ CHFLRQAGHS ENSP00000346335/1-1164 SAVKDGSILS HPALPGTEEA MF-------- ----ALFLQQ CHFLRQAGHS bmy_19392T0/1-1067 SAVKDGSILS HPELPGTEEA MFGMSKSIKL IFKKALFLQQ CHFLRQAGHS ENSTTRP00000012890/1-1165 SAVKDGSILS HPELPGTEEA MF-------- ----ALFLQQ CHFLRQAGHS 501 550 ENSBTAP00000007147/1-1136 EKAVSLFQAM VDFTFFKPDS VKGLPTKGQV EFFEPFWDSG EPRAGEKGAR ENSP00000346335/1-1164 EKAISLFQAM VDFTFFKPDS VKDLPTKGQV EFFEPFWDSG EPRAGEKGAR bmy_19392T0/1-1067 EKAVSLFQAM VDFTFFKPDS VKDLPTKG-- ---------- ---------- ENSTTRP00000012890/1-1165 EKAVSLFQAM VDFTFFKPDS VKDLPTKGQV EFFEPFWDSG EPRAGEKGAR 551 600 ENSBTAP00000007147/1-1136 GWRAWMHQQE WGGWVAVGAD DDDEEPEEED QEIRDKALPR WQIWLAAERS ENSP00000346335/1-1164 GWKAWMHQQE RGGWVVINPD EDDDEPEEDD QEIKDKTLPR WQIWLAAERS bmy_19392T0/1-1067 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012890/1-1165 GWRAWMQQQE RGGWVVVSPD DDDDEPEDDD QEIKDKTLPR WQIWLAAERS 601 650 ENSBTAP00000007147/1-1136 RDHRHWRPWR PDKARKQTEE DCEDPERQVL FDDLGQSLIR LSSPDLQFQM ENSP00000346335/1-1164 RDQRHWRPWR PDKTKKQTEE DCEDPERQVL FDDIGQSLIR LSSHDLQFQL bmy_19392T0/1-1067 ---------- ---------- -------QVL FDDIGQSLIR LSSPDLQFRL ENSTTRP00000012890/1-1165 RDHRHWRPWR PEKTKKQAEE DCEDPERQVL FDDIGQSLIQ LSSPDLQFRL 651 700 ENSBTAP00000007147/1-1136 MAAFLQFLGV PSGFSPPTPC LYLAMDENSI FDSELYDEKP LTFLDLSCSG ENSP00000346335/1-1164 VEAFLQFLGV PSGFTPPASC LYLAMDENSI FDNGLYDEKP LTFFNPLFSG bmy_19392T0/1-1067 IAAFLQFLGV PSGFSPPASC LYLAMDENSI FDNGLYDEKP LTFLNLSFSG ENSTTRP00000012890/1-1165 IAAFLQFLGV PSGFSPPASC LYLAMDENSI FDNGLYDEKP LTFLNLSFSG 701 750 ENSBTAP00000007147/1-1136 VSCVGRMEPL GGRRWPRGPS REGEEFIRNV FHLALPLFAG RERSQLCVSW ENSP00000346335/1-1164 ASCVGRMDRL GYPRWTRGQN REGEEFIRNV FHLVMPLFSG KEKSQLCFSW bmy_19392T0/1-1067 VSCVGRTDQL SCRHWTRGHS REGEEFIRSI FHLVMPLFSG KERSQLCFSW ENSTTRP00000012890/1-1165 VSCIGRTDQL GCRHWTRGHS REGEEFIRNI FHLVMPLFSG KERSQLCFSW 751 800 ENSBTAP00000007147/1-1136 LRYEITKVVW CLHTKNKKRL KSQGKNCKKL AKNLLKEPDN RNSFCLWQQY ENSP00000346335/1-1164 LQYEIAKVIW CLHTKNKKRL KSQGKNCKKL AKNLLKEPEN CNNFCLWKQY bmy_19392T0/1-1067 LQYEIAKVVW CLHTKNKKRL KSQGKNCKKL AKNLLKEPDN RNNFCLWKQY ENSTTRP00000012890/1-1165 LRYEIAKVVW CLRTKNKKRL KSQGKNCKKL AKNLLKEPDN RNNFCLWKQY 801 850 ENSBTAP00000007147/1-1136 AHLEWLLGNT EDARKVFDAA LGTAGSRGLE DPELCELGLL YAALETELSP ENSP00000346335/1-1164 AHLEWLLGNT EDARKVFDTA LGMAGSRELK DSDLCELSLL YAELEVELSP bmy_19392T0/1-1067 AHLEWLLGNT EDARKVFDTA LGIAGSRELK DHELCELGLL YAELEVELLP ENSTTRP00000012890/1-1165 AHLEWLLGNT EDARRVFDTA LGMAGSRELK DHELCELGLL YAELEVELLP 851 900 ENSBTAP00000007147/1-1136 PVGGAAPARA VHVLSGLAER RPYGPCTGQV SAVHVLKARR AYEHALQDWL ENSP00000346335/1-1164 EVRRAATARA VHILTKLTES SPYGPYTGQV LAVHILKARK AYEHALQDCL bmy_19392T0/1-1067 DVRGAAPARA IHVLTRLTEN GAYGPYTGQV SAVHILKARK AYEHALQDCL ENSTTRP00000012890/1-1165 DVRGAAPARA IHVLTRLTEN GAYGPYTGQV LAVHILKARK AYEHALQDCL 901 950 ENSBTAP00000007147/1-1136 GERRGPDPGP PDRFSRLVSL AKCFMLFQYL TVGVDAAGRV YEQVFAGLRG ENSP00000346335/1-1164 GDSCVSNPAP TDSCSRLISL AKCFMLFQYL TIGIDAAVQI YEQVFAKLNS bmy_19392T0/1-1067 GESCVSDPAP ADSFSRLISL VKCFMLFQYL TIGIDAAVRI YEQVFAKHQV ENSTTRP00000012890/1-1165 GESCVSDPAP ADSFSRLISL VKCFMLFQYL TIGIDAAVRI YEQVFAKHKV 951 1000 ENSBTAP00000007147/1-1136 SVSSEAAGLE GA-------- -LEAVTLMHT SLLRFHGRVA AHPLAPLREA ENSP00000346335/1-1164 SVFPEGSGEG DSASSQSWTS VLEAITLMHT SLLRFHMKVS VYPLAPLREA bmy_19392T0/1-1067 SVSAEGPGLE GSASPQSLSS VLEAVTLTHT SLLRFHMKVA VYPLAPLREA ENSTTRP00000012890/1-1165 SVSAEGPGLG GSASPPSLSS VLEAVTLMHT SLLRFHMKVA VYPLAPLREA 1001 1050 ENSBTAP00000007147/1-1136 LSEALRLYPG NQLLWRAYVQ IQSKSHSASR TRRFFHAITR STKLLEPWLF ENSP00000346335/1-1164 LSQALKLYPG NQVLWRSYVQ IQNKSHSASK TRRFFDTITR SAKPLEPWLF bmy_19392T0/1-1067 LSEALKLYPG NQVLWRSYVQ IQNKSHSASK TRRFFDAITR SAKPLEPWLF ENSTTRP00000012890/1-1165 LSEALKLYPD NQVLWRSYVQ IQNKSHSASK TRRFFDAITR SAKPLEPWLF 1051 1100 ENSBTAP00000007147/1-1136 AIEAERMRKR LVDAVQRVDG REVHATLPET GLTHRIRALF ESAVRSDHGS ENSP00000346335/1-1164 AIEAEKLRKR LVETVQRLDG REIHATIPET GLMHRIQALF ENAMRSDSGS bmy_19392T0/1-1067 AIEAEKMRKR LVETVQRVDG REVHATIPET GLTHRIRALF ENAMRSDYGS ENSTTRP00000012890/1-1165 AIEAEKMRKR LVETVQRVDG REVYATIPET GLTHRIRALF ENAMRSDYGS 1101 1150 ENSBTAP00000007147/1-1136 QCPLLWRMYL NFLVSLGNKE RSKGVFYKAL QNCPWAKALY MDAVEYFPDE ENSP00000346335/1-1164 QCPLLWRMYL NFLVSLGNKE RSKGVFYKAL QNCPWAKVLY LDAVEYFPDE bmy_19392T0/1-1067 QCPLLWRMYL NFLVSLGNKE RSKGVFYKAL QNCPWAKVLY LDAVEYFPDE ENSTTRP00000012890/1-1165 QCPLLWRMYL NFLVSLGNKE RSKGVFYKAL QNCPWAKVLY LDAVEYFPDE 1151 1200 ENSBTAP00000007147/1-1136 MQEVVDLMTE KELRVRLPLE ELELLLED ENSP00000346335/1-1164 MQEILDLMTE KELRVRLPLE ELELLLED bmy_19392T0/1-1067 MQEILDLMTE KELRVRLPLE ELELLLED ENSTTRP00000012890/1-1165 MQEILDLMTE KELRVRLPLE ELELLLED