KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:13 2014 Check: 00 .. Name: bmy_17073T0/1-483 Len: 497 Check: 2738 Weight: 1.00 Name: ENSTTRP00000004226/1-491 Len: 497 Check: 4242 Weight: 1.00 Name: ENSP00000376246/1-491 Len: 497 Check: 4154 Weight: 1.00 Name: ENSBTAP00000007148/1-428 Len: 497 Check: 140 Weight: 1.00 Name: BACU016506/1-354 Len: 497 Check: 2506 Weight: 1.00 // 1 50 bmy_17073T0/1-483 MIKPRRDIVP LSREGTEFVM SLSPWLSVPE LSFAQKKKVT VVDTAVS--- ENSTTRP00000004226/1-491 ----MKMAAP TASKAASLGC NNKP--AFPE LDFRSGARVE ELNKLIQEFT ENSP00000376246/1-491 ----MKMAAP TANKAASLGC NNKP--AFPE LDFRSGARVE ELNKLIQEFT ENSBTAP00000007148/1-428 ---------- ---------- --MP------ ---------- ---------- BACU016506/1-354 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_17073T0/1-483 -------TNE KDLELSNS-- --FWLCGMVQ KLDQKLPVAN EYLLLSGGVR ENSTTRP00000004226/1-491 KHDQREYDDQ RALEIHTAKD FIFSMLGMVQ KLDQKLPVAN EYLLLSGGVR ENSP00000376246/1-491 KHDQREYDDQ RALEIHTAKD FIFSMLGMVQ KLDQKLPVAN EYLLLSGGVR ENSBTAP00000007148/1-428 ---------- ---------- -VTKFLGMVQ KLDQKLPVAN EYLLLSGGVR BACU016506/1-354 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_17073T0/1-483 EGVVDLDLDE LNVYARGTDY DMDFTLLVPA LKLHDRNQPV TLDMRHSALC ENSTTRP00000004226/1-491 EGVVDLDLDE LNVYARGTDY DMDFTLLVPA LKLHDRNQPV TLDMRHSALC ENSP00000376246/1-491 EGVVDLDLDE LNVYARGTDY DMDFTLLVPA LKLHDRNQPV TLDMRHSALC ENSBTAP00000007148/1-428 EGVVDLDLDE LNVYARGTDY DMDFTLLVPA LKLHDRNQPV TLDMRHSALC BACU016506/1-354 ---------- ---------- ---------- ---------- ---MRHSALC 151 200 bmy_17073T0/1-483 HSWLSLRLFD EGTISKWKDC CTIVDHINGT TNYFFSPTKV ADWFYDSISI ENSTTRP00000004226/1-491 HSWLSLRLFD EGTISKWKDC CTIVDHINGA TNYFFSPTKV ADWFYDSISI ENSP00000376246/1-491 HSWLSLRLFD EGTISKWKDC CTIVDHINGA TNYFFSPTKV ADWFYDSISI ENSBTAP00000007148/1-428 HSWLSLRLFD EGTISKWKDC CTIVDHINGA TNYFFSPTKV ADWFYDSISI BACU016506/1-354 HSWLSLRLFD EGTISKWKDC CTIVDHINGA TNYFFSPTKV ADWFYDSISI 201 250 bmy_17073T0/1-483 VLSEIQKKPQ RGMPKVEKVE KNGTIISIIL GVGSSRMLYD IVPVVSFKGW ENSTTRP00000004226/1-491 VLSEIQKKPQ RGMPKVEKVE KNGTIISIIL GVGSSRMLYD IVPVVSFKGW ENSP00000376246/1-491 VLSEIQKKPQ RGMPKVEKVE KNGTIISIIL GVGSSRMLYD IVPVVSFKGW ENSBTAP00000007148/1-428 VLSEIQKKPQ RGMPKVEKVE KNGTIISIIL GVGSSRMLYD IVPVVSFKGW BACU016506/1-354 VLSEIQKKPQ RGMPKVEKVE KNGTIISIIL GVGSSRMLYD IVPVVSFKGW 251 300 bmy_17073T0/1-483 PAVAQSWLME NHFWDGKITE EEVISGFYLV PACSYKGKKD NEWRLSFARS ENSTTRP00000004226/1-491 PAVAQSWLME NHFWDGKITE EEVISGFYLV PACSYKGKKD NEWRLSFARS ENSP00000376246/1-491 PAVAQSWLME NHFWDGKITE EEVISGFYLV PACSYKGKKD NEWRLSFARS ENSBTAP00000007148/1-428 PAVAQSWLME NHFWDGKITE EEVISGFYLV PACSYKGKKD NEWRLSFARS BACU016506/1-354 PAVAQSWLME NHFWDGKITE EEVISGFYLV PACSYKGKKD NEWRLSFARS 301 350 bmy_17073T0/1-483 EVQLKKCISS SLMQAYQACK AIIIKLLSRP KAISPYHLRS MMLWACDRLP ENSTTRP00000004226/1-491 EVQLKKCISS SLMQAYQACK AIIIKLLSRP KAISPYHLRS MMLWACDRLP ENSP00000376246/1-491 EVQLKKCISS SLMQAYQACK AIIIKLLSRP KAISPYHLRS MMLWACDRLP ENSBTAP00000007148/1-428 EVQLKKCISS SLMQAYQACK AIIIKLLSRP KAISPYHLRS MMLWACDRLP BACU016506/1-354 EVQLKKCISS SLMQAYQACK AIIIKLLSRP KAISPYHLRS MMLWACDRLP 351 400 bmy_17073T0/1-483 ANYLAQEDYA AHFLLGLIDD LQHCLVNKMC PNYFIPQCNM LEHLSEETVM ENSTTRP00000004226/1-491 ANYLAQEDYA AHFLLGLIDD LQHCLVNKMC PNYFIPQCNM LEHLSEETVM ENSP00000376246/1-491 ANYLAQEDYA AHFLLGLIDD LQHCLVNKMC PNYFIPQCNM LEHLSEETVM ENSBTAP00000007148/1-428 ANYLAQEDYA AHFLLGLIDD LQHCLVNKMC PNYFIPQCNM LEHLSEETVM BACU016506/1-354 ANYLAQEDYA AHFLLGLIDD LQHCLVNKMC PNYFIPQCNM LEHLSEETVM 401 450 bmy_17073T0/1-483 LHARKLSSVR SDPAEHLRTA IEHVKAANRL TLELQRRGST TSIPSPQSDG ENSTTRP00000004226/1-491 LHARKLSSVR SDPAEHLRTA IEHVKAANRL TLELQRRGST TTIPSPQSDG ENSP00000376246/1-491 LHARKLSSVR SDPAEHLRTA IEHVKAANRL TLELQRRGST TSIPSPQSDG ENSBTAP00000007148/1-428 LHARKLSSVR SDPAEHLRTA IEHVKAANRL TLELQRRGST TSIPSPQSDG BACU016506/1-354 LHARKLSSVR SDPAEHLRTA IEHVKAANRL TLELQRRGST TSIPSPQSDG 451 500 bmy_17073T0/1-483 GDPNQPDDRL AKKLQQLVTE NPGKSISVFI NPDDVTRPHF RIDDKFF ENSTTRP00000004226/1-491 GDPNQPDDRL AKKLQQLVTE NPGKSISVFI NPDDVTRPHF RIDDKFF ENSP00000376246/1-491 GDPNQPDDRL AKKLQQLVTE NPGKSISVFI NPDDVTRPHF RIDDKFF ENSBTAP00000007148/1-428 GDPNQPDDRL AKKLQQLVTE NPGKSISVFI NPDDVTRPHF RIDDKFF BACU016506/1-354 GDPNQPDDRL AKKLQQLVTE NPGKSISVFI NPDDVTRPHF RIDDKFF