KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:14 2014 Check: 00 .. Name: ENSBTAP00000007157/1-334 Len: 373 Check: 5810 Weight: 1.00 Name: ENSP00000359052/1-360 Len: 373 Check: 8926 Weight: 1.00 Name: bmy_15566T0/1-192 Len: 373 Check: 1404 Weight: 1.00 Name: BACU002755/1-199 Len: 373 Check: 8851 Weight: 1.00 Name: ENSTTRP00000000269/1-358 Len: 373 Check: 4828 Weight: 1.00 // 1 50 ENSBTAP00000007157/1-334 ---------- ---------- ---LTGSFFS PL-------- -----REVVQ ENSP00000359052/1-360 MMKKKKFKFK VDFELEELSS VPFVNGVLFC KMRLLDGGSF TAESSREVVQ bmy_15566T0/1-192 ---------- ---------- ---------- ---------- ---------- BACU002755/1-199 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000269/1-358 MMKKKKFKFK VDFELEELSS VPFVNGVLFC KMRLLDGGSF TAESPREVVQ 51 100 ENSBTAP00000007157/1-334 ANCVHWRKKF SFMCKMSASA TTGVLDPCIY RVSVRKELKG GKAYAKLGFA ENSP00000359052/1-360 ANCVRWRKKF SFMCKMSASA ATGILDPCIY RVSVRKELKG GKAYAKLGFA bmy_15566T0/1-192 ---------- ---------- ------MFIY R--------- ---------- BACU002755/1-199 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000269/1-358 ANCVHWRKKF SFMCKMSASA TTGILDPCIY RVSVRKELKG GKAYAKLGFA 101 150 ENSBTAP00000007157/1-334 DLNLAEFAGS GNTTRRCLLE GYDTKNTRQD NSILKVWISM QLMSGDPCFK ENSP00000359052/1-360 DLNLAEFAGS GNTTRRCLLE GYDTKNTRQD NSILKVLISM QLMSGDPCFK bmy_15566T0/1-192 ---------- ---------- ---------- ---------- ---------- BACU002755/1-199 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000269/1-358 DLNLAEFAGS GNTTRRCLLE GYDTKNTRQD NSILKVLISM QLMSGDPCFK 151 200 ENSBTAP00000007157/1-334 TPPSTSMCIP IAGESESLEE DRKGGETLKI HLGIADLSAK SASVPDELGA ENSP00000359052/1-360 TPPSTSMSIP IAGESESLQE DRKGGETLKV HLGIADLSAK SASVPDELGA bmy_15566T0/1-192 -PPSTSMSIP IAGESESLEE DRKGGETLKI HLGIADLSAK SASVPDELGA BACU002755/1-199 ------MSIP IAGESESLEE DRKGGETLKI HLGIADLSAK SASVPDELGA ENSTTRP00000000269/1-358 -TPLYSTSIP IAGESESLEE DRKGGETLKI HLGIADLSAK SASVPDELGA 201 250 ENSBTAP00000007157/1-334 CGHSRTSSYA SQQSKVSGYS SCHSRSSSLS ELCHRRNTSV GSTSTGIESI ENSP00000359052/1-360 CGHSRTSSYA SQQSKVSGYS TCHSRSSSFS ELCHRRNTSV GSTSTGVESI bmy_15566T0/1-192 CGHSRTSSYA SQQSKV---- ---------- --------SV GSTSTGIESI BACU002755/1-199 CGHSRTSSYA SQQSKVSGYS SCHSRSSSFS ELCHRRNTSV GSTSTGIESI ENSTTRP00000000269/1-358 CGHSRTSSYA SQQSKVSGYS SCHSRSSSFS E-CHRRNTSV GSTSTGIESI 251 300 ENSBTAP00000007157/1-334 LEPCDEVEQK TAEPSLDVAD KEDTALEILN REEFFLNYFQ RCPVKQDSVE ENSP00000359052/1-360 LEPCDEIEQK IAEPNLDTAD KEDTASEKLS R--------- -CPVKQDSVE bmy_15566T0/1-192 LEPCDEIEQK IAGPNLDTAD KEDTASETLN R--------- -CPVKQDSVE BACU002755/1-199 LEPCDEIEQK IAGPNLDTAD KEDAASETLN R--------- -CPVKQDSVE ENSTTRP00000000269/1-358 LEPCDEIEQK IAGPSLDTAD KEDTASETLN R--------- -CPVKQDSVE 301 350 ENSBTAP00000007157/1-334 SQLKRVDDTR VDADDIVEKI LQSQDFSLDS SAEEQQLHNL FANGIKFGFG ENSP00000359052/1-360 SQLKRVDDTR VDADDIVEKI LQSQDFSLDS SAEEEGLRLF VGPGGSTTFG bmy_15566T0/1-192 SQLKRVDDTR VDADDIVEKI LQSQDFSLDS SAEEEGLRLF VGPGGSTTFG BACU002755/1-199 SQLKRVDDTR VDADDIVEKI LQSQDFSLDS SAEEEGLRLF VGPGGSTTFG ENSTTRP00000000269/1-358 SQLKRVDDTR VDADDIVEKI LQSQDFSLDS SAEEEGLRLF VGPGGSTTFG 351 400 ENSBTAP00000007157/1-334 SRHLPNRVGS GAYEQVVIKR --- ENSP00000359052/1-360 SHHLPNRVGS GAYEQVVIKR --- bmy_15566T0/1-192 SHHLPNRVGS GAYEQVVIKR --- BACU002755/1-199 SHHLPNR--- -----YVVQR VSY ENSTTRP00000000269/1-358 SHHLPNRVGS GAYEQVVIKR ---