KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:15 2014 Check: 00 .. Name: ENSTTRP00000008937/1-849 Len: 943 Check: 1545 Weight: 1.00 Name: ENSP00000360065/1-848 Len: 943 Check: 712 Weight: 1.00 Name: ENSBTAP00000007160/1-854 Len: 943 Check: 1336 Weight: 1.00 Name: bmy_22219T0/1-427 Len: 943 Check: 9838 Weight: 1.00 Name: BACU000183/1-901 Len: 943 Check: 8705 Weight: 1.00 // 1 50 ENSTTRP00000008937/1-849 MTPGKHSRAL AGAADAG-GG YRGSRSSQGR RWSTTPHPVA TMPISPVDSR ENSP00000360065/1-848 MTPGKHSGAS ARAANGGAWG YRDFRGGQKK GWCTTPQLVA TMPVSPAGSH ENSBTAP00000007160/1-854 MTPGKHSRAL ARAANAG-FG YRGFRSSEEK GRLTIPQPVA TMPISPVNGR bmy_22219T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU000183/1-901 ---------- ---------- ---------- ---------- -MPISPVNSR 51 100 ENSTTRP00000008937/1-849 KQPNVG-VNT GAQSKRSIIF TGPAKGAQMK GGYISANQSR MPGSKNMVIL ENSP00000360065/1-848 KQQNFG-LNN ATQPKKSISF FATMKATSVK -GYTGANQSR MAVSKTVLIP ENSBTAP00000007160/1-854 RQPNVGVLNN AAGPRKSISF VGPGKGALMK GGYAGANQSR MAMSKNMMIL bmy_22219T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU000183/1-901 KQPNVG-VNT GAQPKRSISS TGPAKGAQMK GGYISANQSR MAVSKTMVIL 101 150 ENSTTRP00000008937/1-849 PDPKTVEKMN ISSTKTAMRV TDIHGVDVTP RPLYHPDPYT GTAKPNKLLT ENSP00000360065/1-848 PELKTVEKPN --PNIKTTQV FDINGTDVTP RPLYHPDPLT GTAKPSKLLT ENSBTAP00000007160/1-854 PEAKQMEKMT ISSAKTVTQV TDIHGVDVTP KPLYRPDPYS GTGKPNKLLT bmy_22219T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU000183/1-901 PDPKTVEKMN ISSTKTVMRV TDIHGVDVTP RPLYHPDPYT GTAKPNKLLT 151 200 ENSTTRP00000008937/1-849 SQEGSRTSDF IASYSLYQNT INPSTLGQFT RSILGSSTVS KSSTSTTESI ENSP00000360065/1-848 SQEGSLGSEF ISSYSLYQNT INPSTLGQFT RSVLGSSTVS KSSVSASESI ENSBTAP00000007160/1-854 SQDGSHTSDF IASYSLYQNT INPSMLGQFT RSVLGSSTVS KSSVSTSESM bmy_22219T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU000183/1-901 SQEGSRTSDF IASYSLYQNT INPSMLGQFT RSVLGSSTVS KSSTSTTESM 201 250 ENSTTRP00000008937/1-849 VEDLEEPSFK RERLASFTDL QVIRATPGKI VTKEDLEKTI EIILTETETM ENSP00000360065/1-848 AEDLEEPSYK RERLTSFTDL QVIRAAPEKI VTKEDLEKNI EIILTETETL ENSBTAP00000007160/1-854 AEDLEEPSFK RERLSSFTDL RVMRTAPGKI ITKEDLEKTV EIILTETETM bmy_22219T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU000183/1-901 VEDLEEPSFK RERLASFTDL RVIRATPGKI VTKEDLEKTI EIILTETETM 251 300 ENSTTRP00000008937/1-849 NFFNLPTVMV SVESEEAEKI SRRNKNYETL CRNRLGNDLY VERMMQTVNG ENSP00000360065/1-848 RFFDLPTVMV SVESEEAEKV TQRNKNYEVL CRNRLGNDLY VERMMQTFNG ENSBTAP00000007160/1-854 NFLNLPTVMF SVESEEAEKV SQRNKNYETL CRNRLGNDLY VERMMQTING bmy_22219T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU000183/1-901 NFLNLPTVMV SVESEEAEKV SRRNKNYETL CRNRLGNDLY VERMMQTING 301 350 ENSTTRP00000008937/1-849 TPKNKHVQCD KIMKEDKGIM STAWDLYDSY NAMELSSLPV KRSTVDSSSK ENSP00000360065/1-848 APKNKDVQCD KIIMEDKGIM STAWDLYDSY NAMELVSLSV KQSVVESSSK ENSBTAP00000007160/1-854 APKNKDVQCD KILKEDKGIM STAWDLYDSY NAMELSSLPP KRSMIDSSSK bmy_22219T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU000183/1-901 APKNKHIQCD NIMKEDKGIM STAWDLYDSY NAMELSSLPV KPSTVDSSSK 351 400 ENSTTRP00000008937/1-849 ASIPSKDWDQ RLPGSNLEKI SEGSSLMDIE NVILAKVHDE EEDNSEAVLK ENSP00000360065/1-848 ANVLPKDQDQ RLPGSTTEKN SETSSLMDIE NVILAKIHED EEDHSDAILK ENSBTAP00000007160/1-854 ANVPTKDWEQ TVAGSNLEKI SEGSSLMDIE NVILAKVRDE EEDNSDAVFK bmy_22219T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU000183/1-901 ASIPSKDWDQ RLPGSNLEKI SEGSSLMDIE NVILAKVHDE EEDNSEAVLK 401 450 ENSTTRP00000008937/1-849 SDKFQQDLFF MERVIMENMF QPKLAAYRQL PVLKEPEPEE PEDFLVGEKL ENSP00000360065/1-848 SDKFHQDLFF MERVLMENIF QPKLAAYRQL PVLKEPEPEE PEDVLESAKH ENSBTAP00000007160/1-854 SDKFQQDLFF MERVIMENIF QPKLAAYRQL PILKEPEPEE PGDFLVDGKL bmy_22219T0/1-427 ---------- ---------- ---------- -VILEPEPEE PEDFLVGEKL BACU000183/1-901 SDKFQQDLFF MERVIMENIF QPKLAAYHQL PVLKEPEPEE PEDFLVGEKL 451 500 ENSTTRP00000008937/1-849 EEVKEEAKKE EEEETEIGSE QSTIPANLER LWSFSCDLTK GLNVSSLAWN ENSP00000360065/1-848 EEVEEESKKE EEE--EIHAE ESTIPANLER LWSFSCDLTK GLNVSSLAWN ENSBTAP00000007160/1-854 EVVEEEAKKE EEEDLEISSE QSTIPANLER LWSFSCDLTK GLNVSSLAWN bmy_22219T0/1-427 EEVEEEAKKE EEEEIEIGSE QSTIPANLER LWSFSCDLTK GLNVSSLAWN BACU000183/1-901 EEVEEEAKKE EEEEIEIGSE QSTIPANLER LWSFSCDLTK GLNVSSLAWN 501 550 ENSTTRP00000008937/1-849 KKNPDLLAVG YGHFGFKEQK RGLACCWSIK NPMWPERTYQ SPYGVTAVDF ENSP00000360065/1-848 KTNPDLLAVG YGHFGFKEQK RGLACCWSIK NPMWPERIYQ SPYGVTAVDF ENSBTAP00000007160/1-854 KANPDLLAVG YGHFGFKEQK RGLACCWSIK NPMWPERTYQ SPYGVTAVDF bmy_22219T0/1-427 KTNPDLLAVG YGHFGFKEQK RGLACCWSIK NPMWPERTYQ SPCGVTAVDF BACU000183/1-901 KTNPDLLAVG YGHFGFKEQK RGLACCWSIK NPMWPERTYQ SPCGVTAVDF 551 600 ENSTTRP00000008937/1-849 SIGAPNLLAV GYHNGTIAIY NVQSNSNIPV LDSSESPQKH LGPVWQLQWI ENSP00000360065/1-848 SIGAPNLLAV GYHNGTIAIY NVRSNSNVPV LDSSESPQKH LGPVWQLQWI ENSBTAP00000007160/1-854 SIGSPNLLAV GYHNGTIAIY NVQNNSNLPV LDSSESPQKH LGPVWQLQWI bmy_22219T0/1-427 SIGAPNLLAV GYHNGTIAIY NVQSNSNVPV LDSSESPQKH LGPVWQLQWI BACU000183/1-901 SIGAPNLLAV GYHNGTIAIY NVQSNSNVPV LDSSESPQKH LGPVWQLQWI 601 650 ENSTTRP00000008937/1-849 EQDRGTAGD- KREILVSISA DGRISKWVIR KGLDCHDLMH LRRTTASSSK ENSP00000360065/1-848 EQDRGTTGDG KREILVSISA DGRISKWVIR KGLDCYDLMR LKRTTAASNK ENSBTAP00000007160/1-854 EQDRGTTGDD KREILVSISA DGRISKWVIR KGLDCHDLMR LRRTTASTSK bmy_22219T0/1-427 EQDRGTAGDD KREILVSISA DGRISKWVIR KGLDCHDLMR LRRTTASSSK BACU000183/1-901 EQDRGTAGDD KREILVSISA DGRISKWVIR KGLDCHDLMR LRRTTASSSK 651 700 ENSTTRP00000008937/1-849 KGGEK-KKGE ALISRQAPGM CFAFHPKDTN IYLAGTEEGH IHKCSCSYNE ENSP00000360065/1-848 KGGEKEKKDE ALISRQAPGM CFAFHPKDTN IYLAGTEEGH IHKCSCSYNE ENSBTAP00000007160/1-854 KGGEKEKKGE ALISRQAPGM CFAFHPKDTN IYLAGTEEGH IHKCSCSYNE bmy_22219T0/1-427 KGGEKEKKGE ALISRQAPGM CFAFHPKDTN IYLAGTEEGH IHKCSCSYNE BACU000183/1-901 KGGEKEKKGE ALISRQAPGM CFAFHPKDTN IYLAGTEEGH IHKCSCSYNE 701 750 ENSTTRP00000008937/1-849 QYLATYRGHK GPVYKIAWNP FCHDVFLSCS ADWGIIIWQH ENLKPFLSFY ENSP00000360065/1-848 QYLDTYRGHK GPVYKVTWNP FCHDVFLSCS ADWGVIIWQQ ENVKPSLSFY ENSBTAP00000007160/1-854 QYLDTYRGHK GPVYKIAWNP FCHDVFLSCS ADWGVIIWQH ENLKPFLSFY bmy_22219T0/1-427 QYLDTYRGHK GPVYKIAWNP FCHDVFLSCS ADWGVIIWQH ENLKPFLSFY BACU000183/1-901 QYLDTYRGHK GPVYKIAWNP FCHDVFLSCS ADWGVIIWQH ENLKPFLSFY 751 800 ENSTTRP00000008937/1-849 PTTYVVYDVA WSPKSSYIFA AANESRVEVW DLHFSTXXXX XXXXXXXXXX ENSP00000360065/1-848 PATSVVYDVA WSPKSSYIFA AANENRVEIW DLHISTLDPL IVNTANPGIK ENSBTAP00000007160/1-854 PTTYVVYDIA WSPKSSYIFA AANESRVEIW DLHISTLDPL IVNVANPGIK bmy_22219T0/1-427 PTTYVVYDVA WSPKSSYIFA AANESRVEIW DLHISILDPL IVNVANPGIK BACU000183/1-901 PTTYVVYDVA WSPKSSYIFA AANESRVEIW DLHISTLDPL IVNVANPGIK 801 850 ENSTTRP00000008937/1-849 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXX-- ---------- ENSP00000360065/1-848 FTTILFAKQT DCLLVGDSDG QVSVYELRNM PTVLETGR-- ---------- ENSBTAP00000007160/1-854 FTTVLFAKQT DCLLVGDSDG QVAVYELKNM PTTLDSNR-- ---------- bmy_22219T0/1-427 FTTVLFTKQT DCLLVGDSDG QVAVYELRNM PTALDSNR-- ---------- BACU000183/1-901 FTTVLFTKQT DCLLVGDSDG QVAVYELRNM PTALDSNRVF IFAFGHSLPG 851 900 ENSTTRP00000008937/1-849 ---------- ---------- ---------- ---------- ---------- ENSP00000360065/1-848 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007160/1-854 ---------- ---------- ---------- ---------- ---------- bmy_22219T0/1-427 ---------- ---------- ---------- ---------- ---------- BACU000183/1-901 ISHREVKLLS EKVKSEESRK LCGLQYIRTV IYICASSRWR KHLESIPQGQ 901 950 ENSTTRP00000008937/1-849 ---------- ---------- GDIIDTL--- LGPKSNQA-- --- ENSP00000360065/1-848 ---------- ---------- GDIMDTL--- LGSKSNQSA- --- ENSBTAP00000007160/1-854 ---------- ---------R ATIRDCT--- LGPYEEEHS- --- bmy_22219T0/1-427 ---------- ---------- GDIIDTL--- LGPKSNQSII HHQ BACU000183/1-901 QGKQVLHKEV EGGEGAFYDG SDVLHTLSLS VFTATTEVVI TDH