KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:17 2014 Check: 00 .. Name: ENSBTAP00000007175/1-885 Len: 886 Check: 2839 Weight: 1.00 Name: ENSP00000394487/1-766 Len: 886 Check: 2830 Weight: 1.00 Name: BACU006092/1-766 Len: 886 Check: 654 Weight: 1.00 Name: bmy_14571T0/1-491 Len: 886 Check: 5988 Weight: 1.00 Name: ENSTTRP00000013103/1-766 Len: 886 Check: 254 Weight: 1.00 // 1 50 ENSBTAP00000007175/1-885 PNNQLKEKGI FLLSRKLLGF ISFSCFETLP GSSICPKITI VPPCLKSSTT ENSP00000394487/1-766 ---------- ---------- ---------- ---------- ---------- BACU006092/1-766 ---------- ---------- ---------- ---------- ---------- bmy_14571T0/1-491 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013103/1-766 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000007175/1-885 ALIDQNASDE EAQGINGKTP AKHLAASPKP QVPPKPLHLQ NLPSTSIHQT ENSP00000394487/1-766 ---------- ---------- ---------- ---------- ---------- BACU006092/1-766 ---------- ---------- ---------- ---------- ---------- bmy_14571T0/1-491 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013103/1-766 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000007175/1-885 PRHKALSSAK PRMEEVKPAS A-CVSKEKPS KISDLISHFE GGSTLSNYSD ENSP00000394487/1-766 ---------- --MEEIKPAS ASCVSKEKPS KVSDLISRFE GGSSLSNYSD BACU006092/1-766 ---------- --MEEVKPAS ASCVSKEKPR KVSDLISRFE GGSSLSNYSD bmy_14571T0/1-491 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013103/1-766 ---------- --MEEVKPAS ASCVSKEKPS KISDLISRFE GGSSLSNYSD 151 200 ENSBTAP00000007175/1-885 LKKDPAVNLN APRTPGRHGL TDTPQQKLLS QHSPQKQGNG TDQSQGEQTC ENSP00000394487/1-766 LKKESAVNLN APRTPGRHGL TTTPQQKLLS QHLPQRQGND TDKTQGAQTC BACU006092/1-766 LKKDSAVNLN APRTPGRHGL TTTPQQKLLS QHSPQKQGND TDQSQGAQTC bmy_14571T0/1-491 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013103/1-766 LKKDSAVNLN APRTPRRHGL TTTPQQKLLS QHSPQKQGND TDQSQGAQTC 201 250 ENSBTAP00000007175/1-885 VANGMVAAQN QAECEEDKAA TLSPDTSIQT SEPLPDTNLV NGEKQETTIG ENSP00000394487/1-766 VANGVMAAQN QMECEEEKAA TLSSDTSIQA SEPLLDTHIV NGERDETATA BACU006092/1-766 VANGMVAAQT QMECEEDKAA TLSPDTPIQT SEPLPDTNLV NGERQETATD bmy_14571T0/1-491 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013103/1-766 VANGMVAAQN QMECEEDKAA TLSPDTPIQT SEPLPDTNLV NGERQETATD 251 300 ENSBTAP00000007175/1-885 PASPTTNNCH EDASDSSCRT LRASPVLPLE EERTDTEAKV QEMEGEESPL ENSP00000394487/1-766 PASPTTDSCD GNASDSSYRT PGIGPVLPLE ERGAETETKV QERENGESPL BACU006092/1-766 PASPTTNDCD ENASDSSCRT LHVGPVLPLE EGRADTEAKV QEREDGESPL bmy_14571T0/1-491 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013103/1-766 PASPTTNDCD ENASDSSCRT LHVGPRLPLE EGRADTEAKV QEREDGESPL 301 350 ENSBTAP00000007175/1-885 ELEQLDQHHE MKETDEEKLH KIANELLLTE RAYVSRLALL DQVFYCKLLE ENSP00000394487/1-766 ELEQLDQHHE MKETNEQKLH KIANELLLTE RAYVNRLDLL DQVFYCKLLE BACU006092/1-766 ELEQLDQHHE IKETNEQKLH KIANELLLTE RAYVSRLDLL DQVFYCKLLE bmy_14571T0/1-491 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013103/1-766 ELEQLDQHHE MKETNEQKLH KIANELLLTE RAYVSRLDLL DQVFYCKLLE 351 400 ENSBTAP00000007175/1-885 EANRGSFSAE LVNKIFSNIS SINTFHSRFL LPELEKRMQE WETTPRIGDI ENSP00000394487/1-766 EANRGSFPAE MVNKIFSNIS SINAFHSKFL LPELEKRMQE WETTPRIGDI BACU006092/1-766 EANRGSFPAE MVNKIFSNIS SINAFHSKFL LPELEKRMQE WETTPRIGDI bmy_14571T0/1-491 ---------- ---------- ---------- -------MQE WETTPRIGDI ENSTTRP00000013103/1-766 EANRGSFPAE MVNKIFSNIS SINAFHSKFL LPELEKRMQE WETTPRIGDI 401 450 ENSBTAP00000007175/1-885 LQKLAPFLKM YGEYVKGFDN AMELVKNMTE RIPQFKSVVE EIQKQKVCGS ENSP00000394487/1-766 LQKLAPFLKM YGEYVKGFDN AMELVKNMTE RIPQFKSVVE EIQKQKICGS BACU006092/1-766 LQKLAPFLKM YGEYVKGFDN AMELVKNMTE RIPQFKSITE EIQKQKICGS bmy_14571T0/1-491 LQKLAPFLKM YGEYVKGFDN AMELVKNMTE RIPQFKSIIE EIQKQKICGS ENSTTRP00000013103/1-766 LQKLAPFLKM YGEYVKGFDN AMELVKNMTE RIPQFKSIIE EIQKQKICGS 451 500 ENSBTAP00000007175/1-885 LTLQHHMLEP VQRIPRYEML LKDYLRKLPP DSPDWNDAKK SLEIISTAAS ENSP00000394487/1-766 LTLQHHMLEP VQRIPRYEML LKDYLRKLPP DSLDWNDAKK SLEIISTAAS BACU006092/1-766 LTLQHHMLEP VQRIPRYEML LKDYLRKLPP GSPDWNDAKK SLEIISTAAS bmy_14571T0/1-491 LTLQHHMLEP VQRIPRYEML LKDYLRKLPP GSPDWNDAKK SLEIISTAAS ENSTTRP00000013103/1-766 LTLQHHMLEP VQRIPRYEML LKDYLRKLPP GSPDWNDAKK SLEIISTAAS 501 550 ENSBTAP00000007175/1-885 HSNSAIRKME NLKKLLEIYE MLGEEEDIVN PSNELIKDGQ ILKLAARNTS ENSP00000394487/1-766 HSNSAIRKME NLKKLLEIYE MLGEEEDIVN PSNELIKEGQ ILKLAARNTS BACU006092/1-766 HSNSAIRKME NLKKLLEIYE MLGEEEDIVN PSNELIKEGQ ILKLAARNTS bmy_14571T0/1-491 HSNSAIRKME NLKKLLEIYE MLGEEEDIVN PSNELIKEGQ ILKLAARNTS ENSTTRP00000013103/1-766 HSNSAIRKME NLKKLLEIYE MLGEEEDIVN PSNELIKEGQ ILKLAARNTS 551 600 ENSBTAP00000007175/1-885 AQERYLFLFN NMLLYCVPKF SLVGSKFTVR TRVGIDGMKI IETHNEEYPH ENSP00000394487/1-766 AQERYLFLFN NMLLYCVPKF SLVGSKFTVR TRVGIDGMKI VETQNEEYPH BACU006092/1-766 AQERYLFLFN NMLLYCVPRF SLVGSKFTVR TRVGIDGMKI VETHNEEYPH bmy_14571T0/1-491 AQERYLFLFN NMLLYCVPRF SLVGSKFTVR TRVGIDGMKI VETHNEEYPH ENSTTRP00000013103/1-766 AQERYLFLFN NMLLYCVPRF SLVGSKFTVR TRVGIDGMKI VETHNEEYPH 601 650 ENSBTAP00000007175/1-885 TFQISGKERT LELQASSEQD KEEWIKALQE TIDAFHQRHE TFRNAIAKDN ENSP00000394487/1-766 TFQVSGKERT LELQASSAQD KEEWIKALQE TIDAFHQRHE TFRNAIAKDN BACU006092/1-766 TFQVSGKERT LELQASSEQD KEEWIKALQE TIDAFHQRHE TFRNAIAKDN bmy_14571T0/1-491 TFQVSGKERT LELQASSEQD KEEWIKALQE TIDAFHQRHE TFRNAIAKDN ENSTTRP00000013103/1-766 TFQVSGKERT LELQASSEQD KEEWIKALQE TIDAFHQRHE TFRNAIAKDN 651 700 ENSBTAP00000007175/1-885 EIHSEVSTAE LGKRAPKWIR DNEVTMCMKC KESFNALTRR RHHCRACGHV ENSP00000394487/1-766 DIHSEVSTAE LGKRAPRWIR DNEVTMCMKC KEPFNALTRR RHHCRACGYV BACU006092/1-766 DIHSEVSTAE LGKRAPRWIR DNEVTMCMKC KESFNALTRR RHHCRACGHV bmy_14571T0/1-491 DIHSEVSTAE LGKRAPRWIR DNEVTMCMKC KESFNALTRR RHHCRACGYV ENSTTRP00000013103/1-766 DIHSEVSTAE LGKRAPRWIR DNEVTMCMKC KEPFNALTRR RHHCRACGHV 701 750 ENSBTAP00000007175/1-885 VCWKCSDYKA QLEYDGGKLS KVCKDCYQII SGFTDSEEKK RKGILEIESA ENSP00000394487/1-766 VCWKCSDYKA QLEYDGGKLS KVCKDCYQII SGFTDSEEKK RKGILEIESA BACU006092/1-766 VCWKCSDYKA QLEYDGGKLS KVCKDCYQII SGFTDSEEKK RKGILEIESA bmy_14571T0/1-491 VCWKCSDYKA QLEYDGGKLS KVCKDCYQII SGFTDSEEKK RKGILEIESA ENSTTRP00000013103/1-766 VCWKCSDYKA QLEYDGGKLS KVCKDCYQII SGFTDSEEKK RKGILEIESA 751 800 ENSBTAP00000007175/1-885 EVSGNSVVCS FLQYTEKSKP WQKAWCVIPK QDPLVLYMYG APQDVRAQAT ENSP00000394487/1-766 EVSGNSVVCS FLQYMEKSKP WQKAWCVIPK QDPLVLYMYG APQDVRAQAT BACU006092/1-766 EVSGNSVVCS FLQYMEKSKP WQKAWCVIPK QDPLVLYMYG APQDVRAQAT bmy_14571T0/1-491 EVSGNSVVCS FLQYMEKSKP WQKAWCVIPK QDPLVLYMYG APQDVRAQAT ENSTTRP00000013103/1-766 EVSGNSVVCS FLQYMEKSKP WQKAWCVIPK QDPLVLYMYG APQDVRAQAT 801 850 ENSBTAP00000007175/1-885 IPLLGYVVDD MPRSADLPHS FKLTQSKSVH SFAADSEELK QKWLKIILLA ENSP00000394487/1-766 IPLLGYVVDE MPRSADLPHS FKLTQSKSVH SFAADSEELK QKWLKVILLA BACU006092/1-766 IPLLGYIVDD MLRSADLPHS FKLTQSKSVH SFAADSEELK QKWLKIILLA bmy_14571T0/1-491 IPLLGYIVDD MLRSADLPHS FKLTQSKSVH SFAADSEELK QKWLKIILLA ENSTTRP00000013103/1-766 IPLLGYIVDD MLRSADLPHS FKLTQSKSVH SFAADSEELK QKWLKIILLA 851 900 ENSBTAP00000007175/1-885 VTGETPECPS QHPDTLDDHL EPKRKSECQV PRPTTV ENSP00000394487/1-766 VTGETPGGPN EHPATLDDHP EPKKKSEC-- ------ BACU006092/1-766 VTGETPDGPS KHPATLDDDP EPKRKSEC-- ------ bmy_14571T0/1-491 VTGETPDGPS KHPATLDDHP EPKRKSEC-- ------ ENSTTRP00000013103/1-766 VTGETPDGPS KHPATLDDHP EPKRKSEC-- ------