KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:18 2014 Check: 00 .. Name: bmy_02818T0/1-1199 Len: 1209 Check: 6213 Weight: 1.00 Name: ENSP00000343535/1-1102 Len: 1209 Check: 8490 Weight: 1.00 Name: ENSBTAP00000007177/1-1086 Len: 1209 Check: 2396 Weight: 1.00 Name: BACU012973/1-1055 Len: 1209 Check: 7431 Weight: 1.00 Name: ENSTTRP00000014059/1-1109 Len: 1209 Check: 3510 Weight: 1.00 // 1 50 bmy_02818T0/1-1199 MQTWQGTVGL DQKVTQLRVG AVRRWWIFRT NMPFLNSPSA VSEIQVLNQH ENSP00000343535/1-1102 -------MNH QQQQQQQKAG EQQ------- -LS------- ---------- ENSBTAP00000007177/1-1086 ---------- ---------- ---------- -KS------- ---------- BACU012973/1-1055 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014059/1-1109 -------CSH SDVAKRTLPA PQKILLLSHA DMA------- ---------- 51 100 bmy_02818T0/1-1199 HIISIAIGQC SLGSVALGCD ITNGSLWGEE LDLRHLISIG VSDLPRKADC ENSP00000343535/1-1102 ---------- ---------- ------EPED MEME------ ---------- ENSBTAP00000007177/1-1086 ---------- ---------- ------WNFF VSFK------ ---------- BACU012973/1-1055 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014059/1-1109 ---------- ---------- ------GNHG LVPE------ ---------- 101 150 bmy_02818T0/1-1199 TGKQNSISCT GDTDDPPRIT QNPVINGNVA MSDGHNNTEE DMEDDTSWRS ENSP00000343535/1-1102 ---------A GDTDDPPRIT QNPVINGNVA LSDGHNTAEE DMEDDTSWRS ENSBTAP00000007177/1-1086 ---------A GDTDDPPRIT QNPVINGNVA MSDGHSNTEE DMEDDTSWRS BACU012973/1-1055 ---------- ---------- ---------- MSDGHNNTEE DMEDDTSWRS ENSTTRP00000014059/1-1109 ---------A GDADDPPRIT QNPVINGNVA MSDGHNNTEE DMEDDTSWRS 151 200 bmy_02818T0/1-1199 EATFQFTVER FSRLSESVLS PPCFVRNLPW KIMVMPRFYP DRPHQKSIMC ENSP00000343535/1-1102 EATFQFTVER FSRLSESVLS PPCFVRNLPW KIMVMPRFYP DRPHQKSV-- ENSBTAP00000007177/1-1086 EATFQFTVER FSRLSESVLS PPCFVRNLPW KIMVMPRFYP DRPHQKSV-- BACU012973/1-1055 EATFQFTVER FSRLSESVLS PPCFVRNLPW KIMVMPRFYP DRPHQKSV-- ENSTTRP00000014059/1-1109 EATFQFTVER FSRLSESVLS PPCFVRNLPW KIMVMPRFYP DRPHQKSV-- 201 250 bmy_02818T0/1-1199 VPLFRLKKKE GKNMGGFVCC FKNCVEVRSW SCHAQAVLKI INYRDDEKSF ENSP00000343535/1-1102 ---------- ----GFFLQC NAES-DSTSW SCHAQAVLKI INYRDDEKSF ENSBTAP00000007177/1-1086 ---------- ----GFFLQC NAES-DSTSW SCHAQAVLKI INYRDDEKSF BACU012973/1-1055 ---------- ----GFFLQC NAES-DSTSW SCHAQAVLKI INYRDDEKSF ENSTTRP00000014059/1-1109 ---------- ----GFFLQC NAES-DSTSW SCHAQAVLKI INYRDDEKSF 251 300 bmy_02818T0/1-1199 SRRISHLFFH KENDWGFSNF MAWSEVTDPE KGFIDDDKVT FEVFVQADAP ENSP00000343535/1-1102 SRRISHLFFH KENDWGFSNF MAWSEVTDPE KGFIDDDKVT FEVFVQADAP ENSBTAP00000007177/1-1086 SRRISHLFFH KENDWGFSNF MAWSEVTDPE KGFIDDDKVT FEVFVQADAP BACU012973/1-1055 SRRISHLFFH KENDWGFSNF MAWSEVTDPE KGFIDDDKVT FEVFVQADAP ENSTTRP00000014059/1-1109 SRRISHLFFH KENDWGFSNF MAWSEVTDPE KGFIDDDKVT FEVFVQADAP 301 350 bmy_02818T0/1-1199 HGVAWDSKKH TGYVGLKNQG ATCYMNSLLQ TLFFTNQLRK AVYMMPTEGD ENSP00000343535/1-1102 HGVAWDSKKH TGYVGLKNQG ATCYMNSLLQ TLFFTNQLRK AVYMMPTEGD ENSBTAP00000007177/1-1086 HGVAWDSKKH TGYVGLKNQG ATCYMNSLLQ TLFFTNQLRK AVYMMPTEGD BACU012973/1-1055 HGVAWDSKKH TGYVGLKNQG ATCYMNSLLQ TLFFTNQLRK AVYMMPTEGD ENSTTRP00000014059/1-1109 HGVAWDSKKH TGYVGLKNQG ATCYMNSLLQ TLFFTNQLRK AVYMMPTEGD 351 400 bmy_02818T0/1-1199 DSSKSVPLAL QRVFYELQHS DKPVGTKKLT KSFGWETLDS FMQHDVQELC ENSP00000343535/1-1102 DSSKSVPLAL QRVFYELQHS DKPVGTKKLT KSFGWETLDS FMQHDVQELC ENSBTAP00000007177/1-1086 DSSKSVPLAL QRVFYELQHS DKPVGTKKLT KSFGWETLDS FMQHDVQELC BACU012973/1-1055 DSSKSVPLAL QRVFYELQHS DKPVGTKKLT KSFGWETLDS FMQHDVQELC ENSTTRP00000014059/1-1109 DSSKSVPLAL QRVFYELQHS DKPVGTKKLT KSFGWETLDS FMQHDVQELC 401 450 bmy_02818T0/1-1199 RVLLDNVENK MKGTCVEGTI PKLFRGKMVS YIQCKEVDYR SDRREDYYDI ENSP00000343535/1-1102 RVLLDNVENK MKGTCVEGTI PKLFRGKMVS YIQCKEVDYR SDRREDYYDI ENSBTAP00000007177/1-1086 RVLLDNVENK MKGTCVEGTI PKLFRGKMVS YIQCKEVDYR SDRREDYYDI BACU012973/1-1055 RVLLDNVENK MKGTCVEGTI PKLFRGKMVS YIQCKEVDYR SDRREDYYDV ENSTTRP00000014059/1-1109 RVLLDNVENK MKGTCVEGTI PKLFRGKMVS YIQCKEVDYR SDRREDYYDI 451 500 bmy_02818T0/1-1199 QLSIKGKKNI FESFVDYVAV EQLDGDNKYD AGEHGLQEAE KGVKFLTLPP ENSP00000343535/1-1102 QLSIKGKKNI FESFVDYVAV EQLDGDNKYD AGEHGLQEAE KGVKFLTLPP ENSBTAP00000007177/1-1086 QLSIKGKKNI FESFVDYVAV EQLDGDNKYD AGEHGLQEAE KGVKFLTLPP BACU012973/1-1055 QLSIKGKKNI FESFVDYVAV EQLDGDNKYD AGEHGLQEAE KGVKFLTLPP ENSTTRP00000014059/1-1109 QLSIK-KKNI FESFVDYVAV EQLDGDNKYD AGEHGLQEAE KGVKFLTLPP 501 550 bmy_02818T0/1-1199 VLHLQLMRFM YDPQTDQNIK INDRFEFPEQ LPLDEFLQKT DPKDPANYIL ENSP00000343535/1-1102 VLHLQLMRFM YDPQTDQNIK INDRFEFPEQ LPLDEFLQKT DPKDPANYIL ENSBTAP00000007177/1-1086 VLHLQLMRFM YDPQTDQNIK INDRFEFPEQ LPLDEFLQKT DPKDPANYIL BACU012973/1-1055 VLHLQLMRFM YDPQTDQNIK INDRFEFPEQ LPLDEFLQKT DPKDPANYIL ENSTTRP00000014059/1-1109 VLHLQLMRFM YDPQTDQNIK INDRFEFPEQ LPLDEFLQKT DPKDPANYIL 551 600 bmy_02818T0/1-1199 HAVLVHSGDN HGGHYVVYLN PKGDGKWCKF DDDVVSRCTK EEAIEHNYGG ENSP00000343535/1-1102 HAVLVHSGDN HGGHYVVYLN PKGDGKWCKF DDDVVSRCTK EEAIEHNYGG ENSBTAP00000007177/1-1086 HAVLVHSGDN HGGHYVVYLN PKGDGKWCKF DDDVVSRCTK EEAIEHNYGG BACU012973/1-1055 HAVLVHSGDN HGGHYVVYLN PKGDGKWCKF DDDVVSRCTK EEAIEHNYGG ENSTTRP00000014059/1-1109 HAVLVHSGDN HGGHYVVYLN PKGDGKWCKF DDDVVSRCTK EEAIEHNYGG 601 650 bmy_02818T0/1-1199 HDDDLSVRHC TNAYMLVYIR ESKLSEVLQA VTDHDIPQQL VERLQEEKRI ENSP00000343535/1-1102 HDDDLSVRHC TNAYMLVYIR ESKLSEVLQA VTDHDIPQQL VERLQEEKRI ENSBTAP00000007177/1-1086 HDDDLSVRHC TNAYMLVYIR ESKLSEVLQA VTDQDIPQQL VERLQEEKRI BACU012973/1-1055 HDDDLSVRHC TNAYMLVYIR ESKLSEVLQA VTDHDIPQQL VERLQEEKRI ENSTTRP00000014059/1-1109 HDDDLSVRHC TNAYMLVYIR ESKLSEVLQA VTDHDIPQQL VERLQEEKRI 651 700 bmy_02818T0/1-1199 EAQKRKERQE AHLYMQVQIV AEDQFCGHQG NDMYDEEKVK YTVFKVLKNS ENSP00000343535/1-1102 EAQKRKERQE AHLYMQVQIV AEDQFCGHQG NDMYDEEKVK YTVFKVLKNS ENSBTAP00000007177/1-1086 EAQKRKERQE AHLYMQVQIV AEDQFCGHQG NDMYDEEKVR YTVFKVLKNS BACU012973/1-1055 EAQKRKEGQE AHLYMQVQIV AEDQFCGHQG NDMYDEEKVK YTVFKVLKNS ENSTTRP00000014059/1-1109 EAQKRKERQE AHLYMQVQIV AEDQFCGHQG NDMYDEEKVK YTVFKVLKNS 701 750 bmy_02818T0/1-1199 SLAEFVQNLS QTMGFPQDQI RLWPMQARSN GTKRPAMLDN EADGSKTMIE ENSP00000343535/1-1102 SLAEFVQSLS QTMGFPQDQI RLWPMQARSN GTKRPAMLDN EADGNKTMIE ENSBTAP00000007177/1-1086 SLSEFVQNLS QTMGFPQDQI RLWPMQARSN GTKRPAMLDN EADGSKTMIE BACU012973/1-1055 SLAEFVQNLS QTMGFPQDQI RLWPMQARSN GTKRPAMLDN EADGSKTMIE ENSTTRP00000014059/1-1109 SLAEFVQNLS QTMGFPQDQI RLWPMQARSN GTKRPAMLDN EADGSKTMIE 751 800 bmy_02818T0/1-1199 LSDNENPWTI FLETVDPELA ASGATLPKFD KDHDVMLFLK MYDPKTRSLN ENSP00000343535/1-1102 LSDNENPWTI FLETVDPELA ASGATLPKFD KDHDVMLFLK MYDPKTRSLN ENSBTAP00000007177/1-1086 LSDNENPWTI FLETVDPELA ASGATLPKFD KDHDVMLFLK MYDPKTRSLN BACU012973/1-1055 LSDNENPWTI FLETVDPELA ASGATLPKFD KDHDVMLFLK MYDPKTRSLN ENSTTRP00000014059/1-1109 LSDNENPWTI FLETVDPELA ASGATLPKFD KDHDVMLFLK MYDPKTRSLN 801 850 bmy_02818T0/1-1199 YCGHIYTPIS CKIRDLLPVM CDRAGFIQDT SLILYEEVKP NLTERIQDYD ENSP00000343535/1-1102 YCGHIYTPIS CKIRDLLPVM CDRAGFIQDT SLILYEEVKP NLTERIQDYD ENSBTAP00000007177/1-1086 YCGHIYTPIS CKIRDLLPVM CDRAGFIQDT SLILYEEVKP NLTERIQDYD BACU012973/1-1055 YCGHIYTPIS CKIRDLLPVM CDRAGFIQDT SLILYEEVKP NLTERIQDYD ENSTTRP00000014059/1-1109 YCGHIYTPIS CKIRDLLPVM CDRAGFIQDT SLILYEEVKP NLTERIQDYD 851 900 bmy_02818T0/1-1199 VSLDKALDEL MDGDIIVFQK DDPENDNSEL PTAKEYFRDL YHRVDVIFCD ENSP00000343535/1-1102 VSLDKALDEL MDGDIIVFQK DDPENDNSEL PTAKEYFRDL YHRVDVIFCD ENSBTAP00000007177/1-1086 VSLDKALDEL MDGDIIVFQK DDPENDNSEL PTAKEYFRDL YHRVDVIFCD BACU012973/1-1055 VSLDKALDEL MDGDIIVFQK DDPENDNSEL PTAKEYFRDL YHRVDVIFCD ENSTTRP00000014059/1-1109 VSLDKALDEL MDGDIIVFQK DDPENDNSEL PTAKEYFRDL YHRVDVIFCD 901 950 bmy_02818T0/1-1199 KTIPNDPGFV VTLSNRMNYF QVAKTVAQRL NTDPMLLQFF KSQGYRDGPG ENSP00000343535/1-1102 KTIPNDPGFV VTLSNRMNYF QVAKTVAQRL NTDPMLLQFF KSQGYRDGPG ENSBTAP00000007177/1-1086 KTIPNDPGFV VTLSNRMNYF QVAKTVAQRL NTDPMLLQFF KSQGYRDGPG BACU012973/1-1055 KTIPNDPGFV VTLSNRMNYF QVAKTVAQRL NTDPMLLQFF KSQGYRDGPG ENSTTRP00000014059/1-1109 KTIPNDPGFV VTLSNRMNYF QVAKTVAQRL NTDPMLLQFF KSQGYRDGPG 951 1000 bmy_02818T0/1-1199 NPLRHNYEGT LRDLLQFFKP RQPKKLYYQQ LKMKITDFEN RRSFKCIWLN ENSP00000343535/1-1102 NPLRHNYEGT LRDLLQFFKP RQPKKLYYQQ LKMKITDFEN RRSFKCIWLN ENSBTAP00000007177/1-1086 NPLRHNYEGT LRDLLQFFKP RQPKKLYYQQ LKMKITDFEN RRSFKCIWLN BACU012973/1-1055 NPLRHNYEGT LRDLLQFFKP RQPKKLYYQQ LKMKITDFEN RRSFKCIWLN ENSTTRP00000014059/1-1109 NPLRHNYEGT LRDLLQFFKP RQPKKLYYQQ LKMKITDFEN RRSFKCIWLN 1001 1050 bmy_02818T0/1-1199 SQFREEEITL YPDKHGCVRD LLEECKKAVE LGEKASGKLR ---------- ENSP00000343535/1-1102 SQFREEEITL YPDKHGCVRD LLEECKKAVE LGEKASGKLR LLEIVSYKII ENSBTAP00000007177/1-1086 SQFREEEITL YPDKHGCVRD LLEECKKAVE LGEKASGKLR LLEIVSYKII BACU012973/1-1055 SQFREEEITL YPDKHGCVRD LLEECKKAVE LGEKASGKLR LLEIVSYKII ENSTTRP00000014059/1-1109 SQFREEEITL YPDKHGCVRD LLEECKKAVE LGEKASGKLR LLEIVSYKII 1051 1100 bmy_02818T0/1-1199 RAARNCKLQN YWCASRRRTT RMFISCDKSN EIPLDQVDID KENEMLITVA ENSP00000343535/1-1102 GVHQEDELLE CLSPATSRTF RI-------E EIPLDQVDID KENEMLVTVA ENSBTAP00000007177/1-1086 GVHQEDELLE CLSPATSRTF RI-------E EIPLDQVDID KENEMLITVA BACU012973/1-1055 GVHQEDELLE CLSPATSRTF RI-------E EIPLDQVDID KENEMLITVA ENSTTRP00000014059/1-1109 GVHQEDELLE CLSPATSRTF RI-------E EIPLDQVDID KENEMLITVA 1101 1150 bmy_02818T0/1-1199 HFHKEVFGTF GIPFLLRIHQ GEHFREVMKR IQSLLDIQEK EFEKFKFAIV ENSP00000343535/1-1102 HFHKEVFGTF GIPFLLRIHQ GEHFREVMKR IQSLLDIQEK EFEKFKFAIV ENSBTAP00000007177/1-1086 HFHKEVFGTF GIPFLLRIHQ GEHFREVMKR IQSLLDIQEK EFEKFKFAIV BACU012973/1-1055 HFHKEVFGTF GIPFLLRIHQ GEHFREVMKR IQSLLDIQEK EFEKFKFAIV ENSTTRP00000014059/1-1109 HFHKEVFGTF GIPFLLRIHQ GEHFREVMKR IQSLLDIQEK EFEKFKFAIV 1151 1200 bmy_02818T0/1-1199 MMGRHQYINE DEYEVNLKDF EPQPGNMSHP RPWLGLDHFN KAPKRSRYTY ENSP00000343535/1-1102 MMGRHQYINE DEYEVNLKDF EPQPGNMSHP RPWLGLDHFN KAPKRSRYTY ENSBTAP00000007177/1-1086 MMGRHQYINE DEYEVNLKDF EPQPGNMSHP RPWLGLDHFN KAPKRSRYTY BACU012973/1-1055 MMGRHQYINE DEYEVNLKDF EPQPGNMSHP RPWLGLDHFN KAPKRSRYTY ENSTTRP00000014059/1-1109 MMGRHQYINE DEYEVNLKDF EPQPGNMSHP RPWLGLDHFN KAPKRSRYTY 1201 1250 bmy_02818T0/1-1199 LEKAIKIHN ENSP00000343535/1-1102 LEKAIKIHN ENSBTAP00000007177/1-1086 LEKAIKIHN BACU012973/1-1055 LEKAIKIHN ENSTTRP00000014059/1-1109 LEKAIKIHN