KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:31:19 2014 Check: 00 .. Name: ENSP00000455547/1-376 Len: 559 Check: 128 Weight: 1.00 Name: ENSBTAP00000007182/1-516 Len: 559 Check: 6667 Weight: 1.00 Name: bmy_02726T0/1-517 Len: 559 Check: 6482 Weight: 1.00 Name: ENSTTRP00000007793/1-553 Len: 559 Check: 6238 Weight: 1.00 // 1 50 ENSP00000455547/1-376 MDSPGYNCFV DKDKMDAAIQ DLGPKELSCT ELQELKQLAR QGYWAQSHAL ENSBTAP00000007182/1-516 MHPPAYNCFV DRDKMDSAIP DLGPKELSCT ELQELKQLAR QGYWARSYAL bmy_02726T0/1-517 MDSPGYNCFV DRDKMDATIQ DLGPKELSCT ELQELKQLAR QGYWARSYTL ENSTTRP00000007793/1-553 MDSPGYNCFV DRDKMDATIQ DLGPKELSCT ELQELKQLAR QGYWARSYTL 51 100 ENSP00000455547/1-376 RGKVYQRLIR DIPCRTVTPD ASVYSDIVGK IVGKHSSSCL PLPEFVDNTQ ENSBTAP00000007182/1-516 RGQVYQRLIR DIPCRTVTPD ASVYRDIVGK IVGKHSSASL PLPEFVDNTQ bmy_02726T0/1-517 RGKVYQRLIR DIPCRTVTPD ASVYSDIVSK IVGKHSSGSL PLPEFVDNTQ ENSTTRP00000007793/1-553 RGKVYQRLIR DIPCRTVTPD ASVYSDIVGK IVGKHSSGSL PLPEFVDNTQ 101 150 ENSP00000455547/1-376 VPSYCLNARG EGAVRKILLC LANQFPDISF CPALPAVVAL LLHYSIDEAE ENSBTAP00000007182/1-516 VPSYCLNSKG EGAVRKILLC ISNQFPDVSF CPALPAVVAL LLHYSADEAE bmy_02726T0/1-517 VPSYCLNTRG EGAVRKILLC IANQFPDVSF CPALPAVVAL LLHYSIDEAE ENSTTRP00000007793/1-553 VPSYCLNTRG EGAVRKILLC IANQFPDVSF CPALPAVVAL LLHYSIDEAE 151 200 ENSP00000455547/1-376 CFEKACRILA CNDPGRRLID QSFLAFESSC MTFGDLVNKY CQAAHKLMVA ENSBTAP00000007182/1-516 CFEKACRILA CNDSSRKLVD QSFLAFESSC MTFGDLVNKY CQAAHKLMVA bmy_02726T0/1-517 CFEKACRILA CNDPSKKLID QSFLAFESSC MTFGDLVNKY CQAAHKLMVA ENSTTRP00000007793/1-553 CFEKACRILA CNDPSKKLID QSFLAFESSC MTFGDLVNKY CQAAHKLMVA 201 250 ENSP00000455547/1-376 VSEDVLQVYA DWQRWLFGEL PLCYFARVFD VFLVEGYKVL YRVALAILKF ENSBTAP00000007182/1-516 VSEDVLQVYA DWQRWLFGEL PLSYFARVFD VFLVEGYKVL YRVALAILKF bmy_02726T0/1-517 VSEDVLQVYV DWQRWLFGEL PLNYFARVFD VFLVEGYKVL YRVALAILKF ENSTTRP00000007793/1-553 ISEDVLQVYA DWQRWLFGEL PLNYFARVFD VFLVEGYKVL YRVALAILKF 251 300 ENSP00000455547/1-376 FHKVRAGQPL ESDSVKQDIR TFVRDIAKTV SPEKLLEKAF AIRLFSRKEI ENSBTAP00000007182/1-516 FHKVRAGQPL ESDNVKQDIR AFVRDIAKTV SPEKLLEKAF AIRLFSRKEI bmy_02726T0/1-517 FHKVRAGQPL ESDNVKQDIR TFVKDIAKTV SPEKLLEKAF AIRLFSRKEI ENSTTRP00000007793/1-553 FHKVRAGQPL ESDNVKQDIR TFVKDIAKTV SPEKLLEKAF AIRLFSRKEI 301 350 ENSP00000455547/1-376 QLLQMANEKA LKQKGITVKQ KSPG------ ---------- ---------- ENSBTAP00000007182/1-516 QLLQMANEKA LKQKGITVKQ KSVSLSKRQF VHLAVHADNF HSEIVGVKEM bmy_02726T0/1-517 QLLQMANEKA LKQKGITVKQ KSVSLSKRQF VHLAVHAENF HSEIVGVKEM ENSTTRP00000007793/1-553 QLLQMANEKA LKQKGITVKQ K------RQF VHLAVHAENF HSEIVGVKEM 351 400 ENSP00000455547/1-376 RCLWH-SQER YRHCGHVCHA AGADH----- ------EVHH PS-------- ENSBTAP00000007182/1-516 RDIWSWVPER FALCQPLLLF SSLQHGYSLT RFYFQCEGRE PTVLLIKTTQ bmy_02726T0/1-517 RDIWSWVPER FALCQPLLLF SSLQHGYSLT RFYFQCEGHE PTLLLIKTTQ ENSTTRP00000007793/1-553 RDIWSWVPER FALCQPLLLF SSLQHGYSLT RFYFQCEGHE PTLLLIKTTQ 401 450 ENSP00000455547/1-376 --------GH GWHHRH---- ---------- ---------- ---------- ENSBTAP00000007182/1-516 KEVCGAYLST DWSERNKFGG KLGFFGTGEC FVFRLQPEVQ RYEWVVIKHP bmy_02726T0/1-517 KEVCGAYLST DWSERNKFGG KLGFFGTGEC FVFRLQPEVQ RYEWVVIKHP ENSTTRP00000007793/1-553 KEVCGAYLST DWSERNKFGG KLGFFGTGEC FVFRLQPEVQ RYEWVVIKHP 451 500 ENSP00000455547/1-376 ---------- ---------- --------LR PGGGSPHRQL PE-------- ENSBTAP00000007182/1-516 ELTKPAPLEP TTVPPSPSHS VSSEPADRLS PFLATRHFNL PSKTESLFMA bmy_02726T0/1-517 ELTKPVSLES TTILSSPCHS LSSDPADRLS PFLAARHFNL PSKTESLFMA ENSTTRP00000007793/1-553 ELTKPVSLES TTILSSPCHS VSSDPADRLS PFLAARHFNL PSKTESLFMA 501 550 ENSP00000455547/1-376 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007182/1-516 GGSDCLIIG- ---------- ---------- ---------- -----HLAGR bmy_02726T0/1-517 GGNDCLIIDA CG-------- ---------- ---------- -----AGVGT ENSTTRP00000007793/1-553 GGNDCLIIGG GGGQALYIDG DLNRGRTGHC DTFNNQPLCS ENFLIAAVEA 551 600 ENSP00000455547/1-376 --------- ENSBTAP00000007182/1-516 WR------- bmy_02726T0/1-517 --------- ENSTTRP00000007793/1-553 WGFQDPDTQ