KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:20 2014 Check: 00 .. Name: BACU001241/1-840 Len: 902 Check: 1859 Weight: 1.00 Name: ENSP00000250113/1-673 Len: 902 Check: 8336 Weight: 1.00 Name: ENSTTRP00000009703/1-695 Len: 902 Check: 2388 Weight: 1.00 Name: bmy_01736T0/1-712 Len: 902 Check: 5763 Weight: 1.00 Name: ENSBTAP00000007185/1-646 Len: 902 Check: 1359 Weight: 1.00 // 1 50 BACU001241/1-840 ---------- ---------- ---------- -------MTP GALLLLLGAL ENSP00000250113/1-673 ---------- ---------- ---------- ---------M GGL-----AS ENSTTRP00000009703/1-695 ---------- ---------- ---------- ---------M GGL-----AS bmy_01736T0/1-712 PPAAPPPAPP PGRRRGPGPA RTQSAAAAAA GGVGGGGGAM GGL-----AS ENSBTAP00000007185/1-646 ---------- ---------- ---------- ---------- ---------- 51 100 BACU001241/1-840 GAPFAPG--- -ARGSEAEGR LREKLFSGYD SSVRPAREVG DRVGNEKDEE ENSP00000250113/1-673 GGDVEPGLPV EVRGSNGA-- ----FYKGFV KDVH------ ---------E ENSTTRP00000009703/1-695 GGDVEPGLPV EVRGSNGA-- ----FYKGFV KDVH------ ---------E bmy_01736T0/1-712 GGDVEPGLPV EVRGSNGA-- ----FYKGFV KDVH------ ---------E ENSBTAP00000007185/1-646 ---------- ---------- -------GFV KDVH------ ---------E 101 150 BACU001241/1-840 MSTKVYLDLC PKPGISLLMR GTGTQGVLRL RLACCWQSER QIPFGDVRLP ENSP00000250113/1-673 DSVTIFFE-- ---------- ---------- ---NNWQSER QIPFGDVRLP ENSTTRP00000009703/1-695 DSVTIFFE-- ---------- ---------- ---NNWQSER QIPFGDVRLP bmy_01736T0/1-712 DSVTIFFE-- ---------- ---------- ---NNWQSER QIPFGDVRLP ENSBTAP00000007185/1-646 DSVTIFFE-- ---------- ---------- ---NNWQSER QIPFGDVRLP 151 200 BACU001241/1-840 PPADYNKEIT EGDEVEVYSR ANEQEPCGWW LARVRMMKGD FYVIEYAACD ENSP00000250113/1-673 PPADYNKEIT EGDEVEVYSR ANEQEPCGWW LARVRMMKGD FYVIEYAACD ENSTTRP00000009703/1-695 PPADYNKEIT EGDEVEVYSR ANEQEPCGWW LARVRMMKGD FYVIEYAACD bmy_01736T0/1-712 PPADYNKEIT EGDEVEVYSR ANEQEPCGWW LARVRMMKGD FYVIEYAACD ENSBTAP00000007185/1-646 PPADYNKEIT EGDEVEVYSR ANEQEPCGWW LARVRMMKGD FYVIEYAACD 201 250 BACU001241/1-840 ATYNEIVTLE RLRPVNPNPL ATKGSFFKVT MAVPEDLREA CSNENVHKEF ENSP00000250113/1-673 ATYNEIVTLE RLRPVNPNPL ATKGSFFKVT MAVPEDLREA CSNENVHKEF ENSTTRP00000009703/1-695 ATYNEIVTLE RLRPVNPNPL ATKGSFFKVT MAVPEDLREA CSNENVHKEF bmy_01736T0/1-712 ATYNEIVTLE RLRPVNPNPL ATKGSFFKVT MAVPEDLREA CSNENVHKEF ENSBTAP00000007185/1-646 ATYNEIVTLE RLRPVNPNPL ATKGSFFKVT MAVPEDLREA CSNENVHKEF 251 300 BACU001241/1-840 KKALGANCIF LNITNSELFI LSTTEAPVKR ASLLGDMHFR SLRTKLLLMS ENSP00000250113/1-673 KKALGANCIF LNITNSELFI LSTTEAPVKR ASLLGDMHFR SLRTKLLLMS ENSTTRP00000009703/1-695 KKALGANCIF LNITNSELFI LSTTEAPVKR ASLLGDMHFR SLRTKLLLMS bmy_01736T0/1-712 KKALGANCIF LNITNSELFI LSTTEAPVKR ASLLGDMHFR SLRTKLLLMS ENSBTAP00000007185/1-646 KKALGANCIF LNITNSELFI LSTTEAPVKR ASLLGDMHFR SLRTKLLLMS 301 350 BACU001241/1-840 RNEEATKHLE TSKQLAAAFQ EEFTVREDLM GLAIGTHGAN IQQARKVPGV ENSP00000250113/1-673 RNEEATKHLE TSKQLAAAFQ EEFTVREDLM GLAIGTHGAN IQQARKVPGV ENSTTRP00000009703/1-695 RNEEATKHLE TSKQLAAAFQ EEFTVREDLM GLAIGTHGAN IQQARKVPGV bmy_01736T0/1-712 RNEEATKHLE TSKQLAAAFQ EEFTVREDLM GLAIGTHGAN IQQARKVPGV ENSBTAP00000007185/1-646 RNEEATKHLE TSKQLAAAFQ EEFTVREDLM GLAIGTHGAN IQQARKVPGV 351 400 BACU001241/1-840 TAIELGEETC TFRIYGETPE ACRQARSYLE FSEDSVQVPR NLVGKVIGKN ENSP00000250113/1-673 TAIELGEETC TFRIYGETPE ACRQARSYLE FSEDSVQVPR NLVGKVIGKN ENSTTRP00000009703/1-695 TAIELGEETC TFRIYGETPE ACRQARSYLE FSEDSVQVPR NLVGKVIGKN bmy_01736T0/1-712 TAIELGEETC TFRIYGETPE ACRQARSYLE FSEDSVQVPR NLVGKVIGKN ENSBTAP00000007185/1-646 TAIELGEETC TFRIYGETPE ACRQARSYLE FSEDSVQVPR NLVGKVIGKN 401 450 BACU001241/1-840 GKVIQEIVDK SGVVRVRVEG DNDKKNPREE GMVPFIFVGT RENISNAQAL ENSP00000250113/1-673 GKVIQEIVDK SGVVRVRVEG DNDKKNPREE GMVPFIFVGT RENISNAQAL ENSTTRP00000009703/1-695 GKVIQEIVDK SGVVRVRVEG DNDKKNPREE GMVPFIFVGT RENISNAQAL bmy_01736T0/1-712 GKVIQEIVDK SGVVRVRVEG DNDKKNPREE GMVPFIFVGT RENISNAQAL ENSBTAP00000007185/1-646 GKVIQEIVDK SGVVRVRVEG DNDKKNPREE GMVPFIFVGT RENISNAQAL 451 500 BACU001241/1-840 LEYHLSYLQE VEQLRLERLQ IDEQLRQIGL GFRPPGSGRG SGGSDKAGYT ENSP00000250113/1-673 LEYHLSYLQE VEQLRLERLQ IDEQLRQIGL GFRPPGSGRG SGGSDKAGYS ENSTTRP00000009703/1-695 LEYHLSYLQE VEQLRLERLQ IDEQLRQIGL GFRPPGSGRG SGGSDKAGYT bmy_01736T0/1-712 LEYHLSYLQE VEQLRLERLQ IDEQLRQIGL GFRPPGSGRG SGGSDKAGYT ENSBTAP00000007185/1-646 LEYHLSYLQE VEQLRLERLQ IDEQLRQIGL GFRPPGSGRG SGSSDKAGYT 501 550 BACU001241/1-840 TDESSSSSLH TTRTYGGSYG GRGRGRRTGG PACGPISDLS TASETESEKR ENSP00000250113/1-673 TDESSSSSLH ATRTYGGSYG GRGRGRRTGG PAYGPSSDVS TASETESEKR ENSTTRP00000009703/1-695 TDESSSSSLH TTRTYGGSYG GRGRGRRPGG PACGPISDLS TASETESEKR bmy_01736T0/1-712 TDESSSSSLH TTRTYGGSYG GRGRGRRPGG PACGPISDLS TASETESEKR ENSBTAP00000007185/1-646 TDESSSSSLH TTRTYGGSYG GRGRGRRTGG PAYGPNSDLS TASETESEKR 551 600 BACU001241/1-840 EEPNRAGPGD RDPPTRGEES RRRPIGGR-- ---------- ---------V ENSP00000250113/1-673 EEPNRAGPGD RDPPTRGEES RRRPTGGRGR GPPPAPRPTS RYNSSSISSV ENSTTRP00000009703/1-695 EEPNRAGPGD RDPPTRGEES RRRPIGGRVR G-PPAPRPTS RYTSSFISSV bmy_01736T0/1-712 EEPNRAGPGD RDPPTRGEES RRRPIGGRGR GPPPAPRPTS RYNSSSISSV ENSBTAP00000007185/1-646 EEPPRAGPGD RDPPTRGEES RRRPIGGRGR GPPPAPRPTS RYNSSSISSV 601 650 BACU001241/1-840 LKDPDSNPYS LLDTSEPEPP VDSEPGEPPP ASARRRRSRR RRTDEDRTVM ENSP00000250113/1-673 LKDPDSNPYS LLDTSEPEPP VDSEPGEPPP ASARRRRSRR RRTDEDRTVM ENSTTRP00000009703/1-695 L-DPDSNPYS LLDTSEPEPP VDSEPGEPPP ASARRRRSRR RRTDEDRTVM bmy_01736T0/1-712 LKDPDSNPYS LLDTSEPEPP VDSEPGEPPP ASARRRRSRR RRTDEDRTVM ENSBTAP00000007185/1-646 LKDPDSNPYS LLDTSEPEPP VDSEPGEPPP ASARRRRSRR RRTDEDRTVM 651 700 BACU001241/1-840 DGGLESDGPS MTENGLEDES RPQRRNRSRR RRNRGNRTDG SISGDRQPVT ENSP00000250113/1-673 DGGLESDGPN MTENGLEDES RPQRRNRSRR RRNRGNRTDG SISGDRQPVT ENSTTRP00000009703/1-695 DGGLESDGPS MTENGLEDES RPQRRNRSRR RRNRGNRTDG SISGDRQPVT bmy_01736T0/1-712 DGGLESDGPS MTENGLEDES RPQRRNRSRR RRNRGNRTDG SISGDRQPVT ENSBTAP00000007185/1-646 DGGLESDGPG MTENGLEDES RPQRRNRSRR RRNRGNRTDG SISGDRQPVT 701 750 BACU001241/1-840 VADYISRAKS QSRQRPPLER TKPSEDSLSG QKDQAWSLEP PTPTAPTSSS ENSP00000250113/1-673 VADYISRAES QSRQRPPLER TKPSEDSLSG QKGDSVSKLP KGPS------ ENSTTRP00000009703/1-695 VADYISRAKS QSRQRPPLER TKPSEDSLSG QKGDSVSKLP KGPS------ bmy_01736T0/1-712 VADYISRAKS QSRQRPPLER TKPSEDSLSG QKGDSVSKLP KGPS------ ENSBTAP00000007185/1-646 VADYISRAKS QSRQRPPLER TKPSEDSLSG QKGDSVSKLP KGPS------ 751 800 BACU001241/1-840 SGSQEREGAG SPVVSGGLPL EKVKRPMNAF MVWSSAQRRQ MAQQNPKMHN ENSP00000250113/1-673 ---------- ---------- ---------- ---------- --------EN ENSTTRP00000009703/1-695 ---------- ---------- ---------- ---------- --------EN bmy_01736T0/1-712 ---------- ---------- ---------- ---------- --------EN ENSBTAP00000007185/1-646 ---------- ---------- ---------- ---------- --------EN 801 850 BACU001241/1-840 SEISKRLGAQ WKLLGEDEKR PFVEEAKRLR ARHLRDYPDY KYRPRRKTKS ENSP00000250113/1-673 GELSAPLEL- ---------- ---------- ---------- ---------- ENSTTRP00000009703/1-695 GELSAPLEL- ---------- ---------- ---------- ---------- bmy_01736T0/1-712 GELSAPLEL- ---------- ---------- ---------- ---------- ENSBTAP00000007185/1-646 GELSAPLEL- ---------- ---------- ---------- ---------- 851 900 BACU001241/1-840 AGAGSPHFGQ GSGGVAGGGP VWGPGYTTTQ GSRGFGYQPP NYSTAYLPGG ENSP00000250113/1-673 ---------- -------GSM VNGVS----- ---------- ---------- ENSTTRP00000009703/1-695 ---------- -------GSL VWGFINPPAR IPPFSISLAA QHHGPHRPN- bmy_01736T0/1-712 ---------- -------GSL VNGVS----- ---------- ---------- ENSBTAP00000007185/1-646 ---------- -------GSL VNGVS----- ---------- ---------- 901 950 BACU001241/1-840 YW ENSP00000250113/1-673 -- ENSTTRP00000009703/1-695 -- bmy_01736T0/1-712 -- ENSBTAP00000007185/1-646 --