KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:21 2014 Check: 00 .. Name: ENSTTRP00000010703/1-1167 Len: 1182 Check: 2776 Weight: 1.00 Name: ENSP00000311405/1-1168 Len: 1182 Check: 6208 Weight: 1.00 Name: ENSBTAP00000007187/1-1166 Len: 1182 Check: 882 Weight: 1.00 Name: bmy_05803T0/1-1137 Len: 1182 Check: 1611 Weight: 1.00 Name: BACU007982/1-1179 Len: 1182 Check: 3643 Weight: 1.00 // 1 50 ENSTTRP00000010703/1-1167 MSWFSGLLVP KVDERKTAWG ERNGQKRP-R RGTRSSGFCT PRYMSCFQGA ENSP00000311405/1-1168 MSWFSGLLVP KVDERKTAWG ERNGQKRSRR RGTRAGGFCT PRYMSCLRDA ENSBTAP00000007187/1-1166 MSWFSGLLVP KVDERKTAWG ERNGQQRP-R RGTRTSGFCT PRYMSCLQGA bmy_05803T0/1-1137 MSWFSGLLVP KVDERKTAWG ERNGQKRP-R RGTRSSGFCT PRYMSCFQGA BACU007982/1-1179 MSWFSGLLVP KVDERKTAWG ERNGQKRP-R RGTRSSGFCT PRYMSCFQGA 51 100 ENSTTRP00000010703/1-1167 QPPSPTPAAT PRCPWQDEAF IRRGGPGKGL ELGLRAVALG FEDAEATVAV ENSP00000311405/1-1168 EPPSPTPAGP PRCPWQDDAF IRRGGPGKGK ELGLRAVALG FEDTEVTTTA ENSBTAP00000007187/1-1166 QPPSPTPATA PRCPWQDEAF IRRGGPGKGP ELGLRAVALG FEDPEVAGAV bmy_05803T0/1-1137 QPPSPTPAAA PRCPWQDEAF IRRGGPGKGP ELGLRAVALG FEDPEATVAV BACU007982/1-1179 QPPSPTPAAT PRCPWQDEAF IRRGGPGKGL ELGLRAVALG FEDPEATVAV 101 150 ENSTTRP00000010703/1-1167 -GAAEGAPNA AARSRRACWR RLVQVFQSKQ FRSAKLERLY QRYFFQMNQS ENSP00000311405/1-1168 GGTAEVAPDA VPRSGRSCWR RLVQVFQSKQ FRSAKLERLY QRYFFQMNQS ENSBTAP00000007187/1-1166 -GAAEVAPAV ATRSRQACWR QLVQVFQSKQ FRSAKLERLY QRYFFQMNQS bmy_05803T0/1-1137 -GAAEGAPDA AARSRRACWR RLAQVFQSKQ FRSAKLERLY QRYFFQMNQS BACU007982/1-1179 -GAAEGAPDA AARSRRACWC RLVQVFQSKQ FRSAKLERLY QRYFFQMNQS 151 200 ENSTTRP00000010703/1-1167 SLTLLMAVLV LLTAVLLAFH AAPAHPQPAY VALLACAAVL FVALMVVCNR ENSP00000311405/1-1168 SLTLLMAVLV LLTAVLLAFH AAPARPQPAY VALLACAAAL FVGLMVVCNR ENSBTAP00000007187/1-1166 SLTLLMAALV LLTAVLLAFH AAPARPQPAY VALLACAATL FVALMVVCNR bmy_05803T0/1-1137 SLTLLMAVLV LLTAVLLAFH AAPAHPQPAY VALLACAAIL FVALMVVCNR BACU007982/1-1179 SLTLLMAVLV LLTAVLLAFH AAPAHPQPAY VALLACAAIL FVALMVVCNR 201 250 ENSTTRP00000010703/1-1167 HSFRQDSMCL VSYVVLGILX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000311405/1-1168 HSFRQDSMWV VSYVVLGILA AVQVGGALAA DPRSPSAGLW CPVFFVYIAY ENSBTAP00000007187/1-1166 HSFRQDSMWV VSYVVLGILA AVQVGGALAA DPRSPSAGLW CPVFFVYITY bmy_05803T0/1-1137 HSFRQDSMWL VSYVVLGILA AVQVGGALAA SPHSPSVGLW CPVFFVYITY BACU007982/1-1179 HSFRQDSMWL VSYVVLGILA AVQVGGALAA SPHSPSVGLW CPVFFVYITY 251 300 ENSTTRP00000010703/1-1167 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXLG ANMLLFLCTN ENSP00000311405/1-1168 TLLPIRMRAA VLSGLGLSTL HLILAWQLNR GDAFLWKQLG ANVLLFLCTN ENSBTAP00000007187/1-1166 TLLPIRMRAA VFSGLGLSTL HLVLAWQLNR GDAFLWKQLG ANMLLFLCTN bmy_05803T0/1-1137 TLLPIRMRAA VFSGLGLSTL HLILAWQLNR GDAFLWKQLG ANMLLFLCTN BACU007982/1-1179 TLLPIRMRAA VFSGLGLSTL HLILAWQLNR GDAFLWKQLG ANMLLFLCTN 301 350 ENSTTRP00000010703/1-1167 VIGICTHYPA EVSQRQAFQE TRGYIQARLH LQHENRQQER LLLSVLPQHV ENSP00000311405/1-1168 VIGICTHYPA EVSQRQAFQE TRGYIQARLH LQHENRQQER LLLSVLPQHV ENSBTAP00000007187/1-1166 VIGICTHYPA EVSQRQAFQE TRGYIQARLH LQHENRQQER LLLSVLPQHV bmy_05803T0/1-1137 VIGICTHYPA EVSQRQAFQE TRGYIQARLH LQHENRQQER LLLSVLPQHV BACU007982/1-1179 VIGICTHYPA EVSQRQAFQE TRGYIQARLH LQHENRQQER LLLSVLPQHV 351 400 ENSTTRP00000010703/1-1167 AMEMKEDISA KKEDMMFHRI YIQKHDNVSI LFADIEGFTS LASQCTAQEL ENSP00000311405/1-1168 AMEMKEDINT KKEDMMFHKI YIQKHDNVSI LFADIEGFTS LASQCTAQEL ENSBTAP00000007187/1-1166 AMEMKEDINT KKEDMMFHKI YIQKHDNVSI LFADIEGFTS LASQCTAQEL bmy_05803T0/1-1137 AMEMKEDINT KKEDMMFHKI YIQKHDNVSI LFADIEGFTS LASQCTAQEL BACU007982/1-1179 AMEMKEDINT KKEDMMFHKI YIQKHDNVSI LFADIEGFTS LASQCTAQEL 401 450 ENSTTRP00000010703/1-1167 VMTLNELFAR FDKLAAENHC LRIKILGDCY YCVSGLPEAR ADHAHCCVEM ENSP00000311405/1-1168 VMTLNELFAR FDKLAAENHC LRIKILGDCY YCVSGLPEAR ADHAHCCVEM ENSBTAP00000007187/1-1166 VMTLNELFAR FDKLAAENHC LRIKILGDCY YCVSGLPEAR ADHAHCCVEM bmy_05803T0/1-1137 VMTLNELFAR FDKLAAENHC LRIKILGDCY YCVSGLPEAR ADHAHCCVEM BACU007982/1-1179 VMTLNELFAR FDKLAAENHC LRIKILGDCY YCVSGLPEAR ADHAHCCVEM 451 500 ENSTTRP00000010703/1-1167 GVDMIEAISL VREVTGVNVN MRVGIHSGRV HCGVLGLRKW QFDVWSNDVT ENSP00000311405/1-1168 GVDMIEAISL VREVTGVNVN MRVGIHSGRV HCGVLGLRKW QFDVWSNDVT ENSBTAP00000007187/1-1166 GVDMIEAISL VREVTGVNVN MRVGIHSGRV HCGVLGLRKW QFDVWSNDVT bmy_05803T0/1-1137 GVDMIEAISL VREVTGVNVN MRVGIHSGRV HCGVLGLRKW QFDVWSNDVT BACU007982/1-1179 GVDMIEAISL VREVTGVNVN MRVGIHSGRV HCGVLGLRKW QFDVWSNDVT 501 550 ENSTTRP00000010703/1-1167 LANHMEAGGR AGRIHITRAT LQYLNGDYEV EPGRGGERNA YLKEQHIETF ENSP00000311405/1-1168 LANHMEAGGR AGRIHITRAT LQYLNGDYEV EPGRGGERNA YLKEQHIETF ENSBTAP00000007187/1-1166 LANHMEAGGR AGRIHITRAT LQYLNGDYEV EPGRGGERNA YLKEQHIETF bmy_05803T0/1-1137 LANHMEAGGR AGRIHITRAT LQYLNGDYEV EPGRGGERNA YLKEQHIETF BACU007982/1-1179 LANHMEAGGR AGRIHITRAT LQYLNGDYEV EPGRGGERNA YLKEQHIETF 551 600 ENSTTRP00000010703/1-1167 LILGASQKRK EEKAMLAKLQ RARANSVEGL MPRWVLXXXX XXXXXXXXXX ENSP00000311405/1-1168 LILGASQKRK EEKAMLAKLQ RTRANSMEGL MPRWV-PDRA FSRTKDSKAF ENSBTAP00000007187/1-1166 LILGASQKRK EEKAMLAKLQ RARANSMEGL MPRWV-PDRA FSRTKDSKAF bmy_05803T0/1-1137 LILGASQKRK EEKAMLAKLQ RARANSMEGL MPRWV-PDRT FSRTKDSKAF BACU007982/1-1179 LILGASQKRK EEKAMLAKLQ RARANSMEGL MPRWV-PDRT FSRTKDSKAF 601 650 ENSTTRP00000010703/1-1167 XXXGIDDSSK DN-------- -----RGAQD ALNPEDEVDE FLGRAIDARS ENSP00000311405/1-1168 RQMGIDDSSK DN-------- -----RGTQD ALNPEDEVDE FLSRAIDARS ENSBTAP00000007187/1-1166 RQMGIDDSSK DN-------- -----RGAQD ALNPEDEVDE FLGRAIDARS bmy_05803T0/1-1137 RQMGIDDSSK DN-------- -----RGAQD ALNPEDEVDE FLGRAIDARS BACU007982/1-1179 RQMGIDDSSK DNAQAPGEAM SPALSRGAQD ALNPEDEVDE FLGRAIDARS 651 700 ENSTTRP00000010703/1-1167 IDQLRKDHVR RFLLTFQRED LEKKYSRKVD PRFGAYVACA LLVFCFICFI ENSP00000311405/1-1168 IDQLRKDHVR RFLLTFQRED LEKKYSRKVD PRFGAYVACA LLVFCFICFI ENSBTAP00000007187/1-1166 IDQLRKDHVR RFLLTFQRED LEKKYSRKVD PRFGAYVACA LLVFCFICFI bmy_05803T0/1-1137 IDQLRKDHVR RFLLTFQRED LEKKYSRKVD PRFGAYVACA LLVFCFICFI BACU007982/1-1179 IDQLRKDHVR RFLLTFQRED LEKKYSRKVD PRFGAYVACA LLVFCFICFI 701 750 ENSTTRP00000010703/1-1167 QLLVFPPSAL MLGIYASIFL LLLVTVLTCA VYSCGSLFPQ ALRRLSRSIV ENSP00000311405/1-1168 QLLIFPHSTL MLGIYASIFL LLLITVLICA VYSCGSLFPK ALQRLSRSIV ENSBTAP00000007187/1-1166 QLVVFPRSAL MLGIHASIFL LLLVTVLTCA VYSCGSLFPE ALQRVSRSIV bmy_05803T0/1-1137 QLLVFPPSAL MLGIYASIFL LLLVTVLTCA VYSCGSLFPE ALRRLSRSIV BACU007982/1-1179 QLLVFPPSAL MLGIYASTFL LLLVTVLTCA VYSCGSLFPA ALRRLSRSIV 751 800 ENSTTRP00000010703/1-1167 RSRAHSTAVG IFSVLLVFVS AIANMFTCNH TPIRTCAARM LNLTPADITA ENSP00000311405/1-1168 RSRAHSTAVG IFSVLLVFTS AIANMFTCNH TPIRSCAARM LNLTPADITA ENSBTAP00000007187/1-1166 RSRAHSTAVG IFSVLLVFTS AVASMFTCNH TPLRTCAARM LNLTPADITA bmy_05803T0/1-1137 RSRAHSTA-- ---------- -----FTCNH TPIRTCAARM LNLTPADITA BACU007982/1-1179 RSRAHSTAVG IFSVLLVFTS AIANMFTCNH TPIRTCAARM LNLTPADITA 801 850 ENSTTRP00000010703/1-1167 CHLQQLNYSL GLDVPLCEGT APTCSFPEYF VGSVLLSLLA SSVFLHISSI ENSP00000311405/1-1168 CHLQQLNYSL GLDAPLCEGT MPTCSFPEYF IGNMLLSLLA SSVFLHISSI ENSBTAP00000007187/1-1166 CHLQQLNYSL GLDAPLCEGT APTCSFPEYF IGNVLLSLLA SSVFLHISSI bmy_05803T0/1-1137 CHLQQLNYSL GLDAPLCEGT APSCSFPEYF VGNMLLSLLA SSVFLHISSI BACU007982/1-1179 CHLQQLNYSL GLDAPLCEGT APSCSFPEYF VGNMLLSLLA SSVFLHISSI 851 900 ENSTTRP00000010703/1-1167 GKLAMIFVLG LIYLVLLLLG PPATIFDNYD LLLGVHGLAS SNETFSVLDC ENSP00000311405/1-1168 GKLAMIFVLG LIYLVLLLLG PPATIFDNYD LLLGVHGLAS SNETFDGLDC ENSBTAP00000007187/1-1166 GKLAMIFVLG LVYLVLLLLG PPATIFDNYD LLLGVHGLAS SNETFDGLDC bmy_05803T0/1-1137 GKLAMIFVLG LIYLVLLLLG PPATIFDNYD LLLGVHGF-- ---------- BACU007982/1-1179 GKLAMIFVLG LIYLVLLLLG PPATIFDNYD LLLGVHGLAS SNETFSGLDC 901 950 ENSTTRP00000010703/1-1167 SAAGRVALKY MTPVILLVFA LALYLHAQQV ESTARLDFLW KLQATGEKEE ENSP00000311405/1-1168 PAAGRVALKY MTPVILLVFA LALYLHAQQV ESTARLDFLW KLQATGEKEE ENSBTAP00000007187/1-1166 PAAGRVALKY MTPVILLVFA LALYLHAQQV ESTARLDFLW KLQATGEKEE bmy_05803T0/1-1137 SAAGRVALKY MTPVILLVFA LALYLHAQQV ESTARLDFLW KLQATGEKEE BACU007982/1-1179 SAAGRVALKY MTPVILLVFA LALYLHAQQV ESTARLDFLW KLQATGEKEE 951 1000 ENSTTRP00000010703/1-1167 MEELQAYNRR LLHNILPKDV AAHFLARERR NDELYYQSCE CVAVMFASIA ENSP00000311405/1-1168 MEELQAYNRR LLHNILPKDV AAHFLARERR NDELYYQSCE CVAVMFASIA ENSBTAP00000007187/1-1166 MEELQAYNRR LLHNILPKDV AAHFLARERR NDELYYQSCE CVAVMFASIA bmy_05803T0/1-1137 MEELQAYNRR LLHNILPKDV AAHFLARERR NDELYYQSCE CVAVMFASIA BACU007982/1-1179 MEELQAYNRR LLHNILPKDV AAHFLARERR NDELYYQSCE CVAVMFASIA 1001 1050 ENSTTRP00000010703/1-1167 NFSEFYVELE ANNEGVECLR LLNEIIADFD EIISEERFRQ LEKIKTIGST ENSP00000311405/1-1168 NFSEFYVELE ANNEGVECLR LLNEIIADFD EIISEERFRQ LEKIKTIGST ENSBTAP00000007187/1-1166 NFSEFYVELE ANNEGVECLR LLNEIIADFD EIISEERFRQ LEKIKTIGST bmy_05803T0/1-1137 NFSEFYVELE ANNEGVECLR LLNEIIADFD EIISEERFRQ LEKIKTIGST BACU007982/1-1179 NFSEFYVELE ANNEGVECLR LLNEIIADFD EIISEERFRQ LEKIKTIGST 1051 1100 ENSTTRP00000010703/1-1167 YMAASGLNAS TYDQVGRSHI TALADYAMRL MEQMKHINEH SFNNFQMKIG ENSP00000311405/1-1168 YMAASGLNAS TYDQVGRSHI TALADYAMRL MEQMKHINEH SFNNFQMKIG ENSBTAP00000007187/1-1166 YMAASGLNAS TYDQVGRSHI TALADYAMRL MEQMKHINEH SFNNFQMKIG bmy_05803T0/1-1137 YMAASGLNAS TYDQVGRSHI TALADYAMRL MEQMKHINEH SFNNFQMKIG BACU007982/1-1179 YMAASGLNAS TYDQVGRSHI TALADYAMRL MEQMKHINEH SFNNFQMKIG 1101 1150 ENSTTRP00000010703/1-1167 LNMGPVVAGV IGARKPQYDI WGNTVNVSSR MDSTGVPDRI QVTTDLYQVL ENSP00000311405/1-1168 LNMGPVVAGV IGARKPQYDI WGNTVNVSSR MDSTGVPDRI QVTTDLYQVL ENSBTAP00000007187/1-1166 LNMGPVVAGV IGARKPQYDI WGNTVNVSSR MDSTGVPDRI QVTTDLYQVL bmy_05803T0/1-1137 LNMGPVVAGV IGARKPQYDI WGNTVNVSSR MDSTGVPDRI QVTTDLYQVL BACU007982/1-1179 LNMGPVVAGV IGARKPQYDI WGNTVNVSSR MDSTGVPDRI QVTTDLYQVL 1151 1200 ENSTTRP00000010703/1-1167 AAKGYQLECR GVVKVKGKGE MTTYFLNGGP SS ENSP00000311405/1-1168 AAKGYQLECR GVVKVKGKGE MTTYFLNGGP SS ENSBTAP00000007187/1-1166 AAKGYQLECR GVVKVKGKGE MTTYFLNGGP RS bmy_05803T0/1-1137 AAKGYQLECR GVVKVKGKGE MTTYFLNGGP SS BACU007982/1-1179 AAKGYQLECR GVVKVKGKGE MTTYFLNGGP SS