KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:31:21 2014 Check: 00 .. Name: bmy_07248T0/1-272 Len: 380 Check: 6047 Weight: 1.00 Name: ENSBTAP00000007189/1-380 Len: 380 Check: 1250 Weight: 1.00 Name: BACU003097/1-377 Len: 380 Check: 6240 Weight: 1.00 Name: ENSTTRP00000010526/1-320 Len: 380 Check: 138 Weight: 1.00 // 1 50 bmy_07248T0/1-272 ---------- ----MSR--- ---------- ---------- ---------- ENSBTAP00000007189/1-380 MAAAVHPRVV RVLPMSRSSV PALAASVFHS PPQRQLHHAV IPHGKGGRSS BACU003097/1-377 MAAAVHPRVV RALPMSRSSV TTIATSVFHG PPQRQLHHAL MPHGKGGRSS ENSTTRP00000010526/1-320 MAAAVHPRVV RALPMSRSSV TTIATSVFRG PPQRQLHPAL TPHGKGGRSS 51 100 bmy_07248T0/1-272 ---------- ---------- ----RMGSQV IVPYRGEPYD TXHLRPMGYL ENSBTAP00000007189/1-380 VSGIVATVFG ATGFLGRYVV NHLGRMGSQV IVPHRCEPYD TMHLRPMGDL BACU003097/1-377 VSGIVATVFG ATGFLGRYVV NHLGRMGSQV IVPYRCEPYD TMHLRPMGDL ENSTTRP00000010526/1-320 VSGIVATVFG ATGFLGRYVV NHL-RMGSQV IVPYRCEPYD TMHLRPMGDL 101 150 bmy_07248T0/1-272 GQIIFLEWKG RDKDSILSAV EHSNVVINLI GRERETKNFD FD-------- ENSBTAP00000007189/1-380 GQIIFMDWNG RDKDSIRRAV EHSSVVINLV GREWETQNFD FEDVFVKIPQ BACU003097/1-377 GQIIFMEWSG RDKDSIRRAV EHSNVVVNLV GREWETKNFD FEDVFVKIPQ ENSTTRP00000010526/1-320 SQIIFLEWNG RDKDSIRRAV EHSNVVINLV GREWETKNFG FEDVFVKIPQ 151 200 bmy_07248T0/1-272 ---------- ---------- ------PSKY LRNKVAAEKE VRDTFPEATI ENSBTAP00000007189/1-380 AIAQVSKEAG VEKFIHISHL NADIKSSSKY LRSKAVGEKE VRETFPEATI BACU003097/1-377 AIAQVSKEAG VEKLIHVSHL NADIKSPSKY LRNKAAGEKE VRDTFPEATI ENSTTRP00000010526/1-320 AIAQVSKEAG VEKFIHVSHL NADIKSSSKY LRNKAAGEKE VRDAFPEATI 201 250 bmy_07248T0/1-272 IKPSDIFGRE DRFLNYFASI QWFGVVPLIS LGTKTVKQPI YIVDVTKGIV ENSBTAP00000007189/1-380 IKPAEIFGRE DRFLNYFANI RWFGGVPLIS LGKKTVKQPV YIVDVTKGII BACU003097/1-377 IKPSDIFGRE DRFLNYFASI RWFGGVPLIS LGKKTVKQPV YIVDVARGIV ENSTTRP00000010526/1-320 IKPSDIFGRE DRFLNYFASI RWFGGVPLIS LGKKTVKQPV YIVDVTKGIV 251 300 bmy_07248T0/1-272 NAVKDPDARG KTFAFVGPSW YVLFDLVQYV FAIAHRPFLA YPLPHFAYRW ENSBTAP00000007189/1-380 NAIKDPDARG KTFAFVGPSR YLLFDLVQYV FAVAHRPFLP YPLPHFAYRW BACU003097/1-377 NAIKDPDARG KTFAFVGPSR YVLFDLVQYI FAVAHRPFLA YPLPHFAYQW ENSTTRP00000010526/1-320 NAIKDPDARG KTFAFVGPSR YVLFDLVQYI FAVAHRPFLA YPLPHFVYRW 301 350 bmy_07248T0/1-272 LGRLFEMSPF EPWTTRDKVE RVHITDMTLP HLPGLEGLGI QATPLELKAI ENSBTAP00000007189/1-380 IGRLFEISPF EPWTTRDKVE RIHTTDKILP HLPGLEDLGV EATPLELKAI BACU003097/1-377 LGRLFEMSPF EPWTTRDKVE RVHITDMTLP HLPGLEDLGI QATPLELKAI ENSTTRP00000010526/1-320 LGRLFEISPF EPWTTRDKVE R--------- ---------- ---------- 351 400 bmy_07248T0/1-272 EVLQHHRTHR WLSSEIEDVK PAKTVPV--- ENSBTAP00000007189/1-380 EVLRRHRTYR WLSSEIEDVQ PAKTIPTSGP BACU003097/1-377 EVLRRHRTYR WLSSEIEDVK PSKTVTV--- ENSTTRP00000010526/1-320 ---------- ---------- ----------