KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:31:22 2014 Check: 00 .. Name: ENSTTRP00000012099/1-916 Len: 952 Check: 3908 Weight: 1.00 Name: bmy_00937T0/1-943 Len: 952 Check: 2316 Weight: 1.00 Name: ENSP00000310670/1-923 Len: 952 Check: 2254 Weight: 1.00 Name: ENSBTAP00000007194/1-916 Len: 952 Check: 6396 Weight: 1.00 // 1 50 ENSTTRP00000012099/1-916 ----MSQFKR QRINPLPGGR N--------- -FSGAASTSL -GPXXXXXXX bmy_00937T0/1-943 HIRERGSFR- -PVVAFPERR FRWRQQQRLW WFRVSLSPRC RGPGPQVFPQ ENSP00000310670/1-923 ----MSQFKR QRINPLPGGR N--------- -FSGTASTSL LGPPPGLLTP ENSBTAP00000007194/1-916 ----MSQFKR QRINPLPGGR N--------- -FSGAASTSL LGPPPGLLTP 51 100 ENSTTRP00000012099/1-916 XXXXXXXXXX XXXXGGEKQR VFTGIVTS-- -LHDYFGVVD EEVFFQL--- bmy_00937T0/1-943 DSERGQHSQC PSLSASGSTH -YQGDATSQA QLQHLFWVLL LVCSLLLWPQ ENSP00000310670/1-923 PVATELSQNA RHLQGGEKQR VFTGIVTS-- -LHDYFGVVD EEVFFQL--- ENSBTAP00000007194/1-916 PVATDLSQNA RHLQGGEKQR VFTGIVTS-- -LHDYFGVVD EEVFFQL--- 101 150 ENSTTRP00000012099/1-916 ---------S VVKGRLPQLG EKVLVKAAYN PGQAVPWNAV KVQTLSNQPL bmy_00937T0/1-943 TCPKMPGTFS VVKGRLPQLG EKVLVKAAYN PGQAVPWNAV KVQTLSNQPL ENSP00000310670/1-923 ---------S VVKGRLPQLG EKVLVKAAYN PGQAVPWNAV KVQTLSNQPL ENSBTAP00000007194/1-916 ---------S VVKGRLPQLG EKVLVKAAYN PGQAVPWNAV KVQTLSNQPL 151 200 ENSTTRP00000012099/1-916 LKSPAPPLLH VAALGQKQGI LGAQPQLIFQ PHRIPPLFPQ KPLSLFQTSH bmy_00937T0/1-943 LKSPAPPLLH VAALGQKQGI LGAQPQLIFQ PHRIPPLFPQ KPLSLFQTSH ENSP00000310670/1-923 LKSPAPPLLH VAALGQKQGI LGAQPQLIFQ PHRIPPLFPQ KPLSLFQTSH ENSBTAP00000007194/1-916 LKSPAPPLLH VAALGQKQGI LGAQPQLIFQ PHRIPPLFPQ KPLSLFQTSH 201 250 ENSTTRP00000012099/1-916 TLHLSHLNRF PARGPHGRLD PGRSDDYDSK KRKQRAGGEP WGAKKPRHDL bmy_00937T0/1-943 TLHLSHLNRF PARGPHGRLD PGRSDDYDSK KRKQRAGGEP WGAKKPRHDL ENSP00000310670/1-923 TLHLSHLNRF PARGPHGRLD QGRSDDYDSK KRKQRAGGEP WGAKKPRHDL ENSBTAP00000007194/1-916 TLHLSHLNRF PARGPHGRLD QGRSDDYDSK KRKQRAGGEP WGAKKPRHDL 251 300 ENSTTRP00000012099/1-916 PPYRVHLTPY TVDSSTCDFL ELQRRYRTLL VPADFLAVHL SWLSAFPLSQ bmy_00937T0/1-943 PPYRVHLTPY TVDSPTCDFL ELQRRYRTLL VPSDFLAVHL SWLSAFPLSQ ENSP00000310670/1-923 PPYRVHLTPY TVDSPICDFL ELQRRYRSLL VPSDFLSVHL SWLSAFPLSQ ENSBTAP00000007194/1-916 PPYRVHLTPY TVDSPVFDFL ELQRRYRTLL VPSDFLAVHL SWLSAFPVSQ 301 350 ENSTTRP00000012099/1-916 PFSLHHPSRI QASSEKEPAP DAGAEPTSTD SDPAYSSKXX XXXXXXXXXX bmy_00937T0/1-943 PFSLHHPSRI QASPEKEAAP DAGAEPAPTD SDPAYSSKVL LLSSPGLEEL ENSP00000310670/1-923 PFSLHHPSRI QVSSEKEAAP DAGAEPITAD SDPAYSSKVL LLSSPGLEEL ENSBTAP00000007194/1-916 PFSLHHPSRI QVSSEKEPAA DAGAEPPPTD SDPTYSSKVL LLSSPGLEEL 351 400 ENSTTRP00000012099/1-916 XXXXXXXXXX XXXXXXXXXX XXKQIKFLLG QKEEEVVLVG GEWSPSLDGL bmy_00937T0/1-943 YRCCMLFVDD VAEPRETPEH PLKQIKFLLG QKEEEVVLVG GEWSPSLDGL ENSP00000310670/1-923 YRCCMLFVDD MAEPRETPEH PLKQIKFLLG RKEEEAVLVG GEWSPSLDGL ENSBTAP00000007194/1-916 YRCCMLFVDD MAEPRETPEH PLKQIKFLLG WKDDEAVLVG GEWSPSLDGL 401 450 ENSTTRP00000012099/1-916 DPKGDPQVLV RTAIRCAQAQ TGIDLSACTK WWRFAEFQYL QLGPPRRLQT bmy_00937T0/1-943 DPKGDPQVLV RTAIRCAQAQ TGIDLSACTK WWRFAEFQYL QLGPPRRLQT ENSP00000310670/1-923 DPQADPQVLV RTAIRCAQAQ TGIDLSGCTK WWRFAEFQYL QPGPPRRLQT ENSBTAP00000007194/1-916 DPKGDPQVLV RTATRCAQAQ AGIDLSACTK WWRFAEFQYL QAGPPRRLQT 451 500 ENSTTRP00000012099/1-916 VVVYLPDIWT IMPTLEEWEA LCQQKAAEAA PPPQEVPVET EPTEQAADAS bmy_00937T0/1-943 VVVYLPDIWT IMPTLEEWEA LCQQKAAEAA PPPQEVPVET EPTEQAADAS ENSP00000310670/1-923 VVVYLPDVWT IMPTLEEWEA LCQQKAAEAA PPTQEAQGET EPTEQAPDAL ENSBTAP00000007194/1-916 VVVYLPDIWT IMPTLEEWEA LCQQKAAEAA PPPPEVPVET EPTEQPADGS 501 550 ENSTTRP00000012099/1-916 EQAADTSKQN AENPEVTAQQ EMDTDLPEAP PPPLEPAVMA RPSCVNLSIH bmy_00937T0/1-943 EQAADTSKQN AENPEVTAQQ EMDTDLPEAP PPPLEPAVMA RPSCVNLSIH ENSP00000310670/1-923 EQAADTSRRN AETPEATTQQ ETDTDLPEAP PPPLEPAVIA RPGCVNLSLH ENSBTAP00000007194/1-916 EQAADTSK-S AENPEVTAQQ EVDTDLPEAP PPPLEPAVMA RSRCVNLSLQ 551 600 ENSTTRP00000012099/1-916 SIVEDRRPKE RISFEVMVLA ELFLEMLQRD FGYRIYKMLL SLPEKVVAAP bmy_00937T0/1-943 SIVEDRRPKE RISFEVMVLA ELFLEMLQRD FGYRIYKMLL SLPEKVVAAP ENSP00000310670/1-923 GIVEDRRPKE RISFEVMVLA ELFLEMLQRD FGYRVYKMLL SLPEKVVSPP ENSBTAP00000007194/1-916 SIVEDRRPKE RISFEATVLA ELFLEMLQRD FGYRIYKTLL SLPEKVVAPP 601 650 ENSTTRP00000012099/1-916 EPEKEEAA-- ---KEEEAVK EE-SKESKDE VQSEGTAAES DAPPKEDGLL bmy_00937T0/1-943 EPEKEEAA-- ---KEEEAVK EE-AKESKDE VQSEGTAAES DAPPKEDGLL ENSP00000310670/1-923 EPEKEEAAKE EATKEEEAIK EEVVKEPKDE AQNEGPATES EAPLKEDGLL ENSBTAP00000007194/1-916 EPEKEEAA-- ---KEEEAVK EE-AKESKDE VQSEGTAAEA DAPPKEDGLL 651 700 ENSTTRP00000012099/1-916 PKPPSSGGEE EEKPRGEVSE DLCEMALDPE LLLLRDDGEE EFAGAKLEDS bmy_00937T0/1-943 PKPPSSGGEE EEKPRGEVSE DLCEMALDPE LLLLRDDGEE EFAGAKLEDS ENSP00000310670/1-923 PKPLSSGGEE EEKPRGEASE DLCEMALDPE LLLLRDDGEE EFAGAKLEDS ENSBTAP00000007194/1-916 PKPPSSGGED EEKPRGEASE DLCEMALDPE LLLLRDDGEE EFAGAKLEDS 701 750 ENSTTRP00000012099/1-916 EVRSVASNQS EMEFSSLQDM XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00937T0/1-943 EVRSVASNQS EMEFSSLQDM PKELDPSPVL PLDCLLAFVF FDANWCGYLH ENSP00000310670/1-923 EVRSVASNQS EMEFSSLQDM PKELDPSAVL PLDCLLAFVF FDANWCGYLH ENSBTAP00000007194/1-916 EVRSVASNQS EMEFSTLQDM PKELEPSAVL PVDCLLAFVY FDANWCGYLH 751 800 ENSTTRP00000012099/1-916 XXXXXXXXXX XXXXXXXXXA KQLVSRVVAQ NICQYRSLQY SRPEGPDGGL bmy_00937T0/1-943 RRDLERILLT LGLRLSAEQA KQLVSRVVAQ NICQYRSLQY SRPEGPDGGL ENSP00000310670/1-923 RRDLERILLT LGIRLSAEQA KQLVSRVVTQ NICQYRSLQY SRQEGLDGGL ENSBTAP00000007194/1-916 RRDLERILLT LGLRLSAEQA KQLVSRAVSQ NICQYRSLQY SRPEGPDGAL 801 850 ENSTTRP00000012099/1-916 PEEVLFGNLD LLPPPGKSAK PGAAPVEHKG LVSHNGSLIN VGNLLQRAEQ bmy_00937T0/1-943 PEEVLFGNLD LLPPPGKSAK PGAAPVEHKG LVSHNGSLIN VGNLLQRAEQ ENSP00000310670/1-923 PEEVLFGNLD LLPPPGKSTK PGAAPTEHKA LVSHNGSLIN VGSLLQRAEQ ENSBTAP00000007194/1-916 PEDLLFGNLD LLPPPGKSGK PGTTPVEHKG LVSHNGSLIN VGNLLQRAEQ 851 900 ENSTTRP00000012099/1-916 QDSGRLYLEN KIHTLELKLE ESHNRFSATE VTNKTLAAEM QELRTRLAEA bmy_00937T0/1-943 QDSGRLYLEN KIHTLELKLE ESHNRFSATE VTNKTLAAEM QELRTRLAEA ENSP00000310670/1-923 QDSGRLYLEN KIHTLELKLE ESHNRFSATE VTNKTLAAEM QELRVRLAEA ENSBTAP00000007194/1-916 QDSGRLYLEN KIHTLELKLE ESHNRFSATE VTNKTLATEM QDLRARLAEA 901 950 ENSTTRP00000012099/1-916 EETARTAERQ KHQLQRLLQE FRRRLTPLQL EVQRMVEKAD SWVEKEEPAP bmy_00937T0/1-943 EETARTAERQ KHQFQRLLQE FRRRLTPLQL EVQRMVEKAD SWVEKEEPAP ENSP00000310670/1-923 EETARTAERQ KSQLQRLLQE LRRRLTPLQL EIQRVVEKAD SWVEKEEPAP ENSBTAP00000007194/1-916 EEMARTAERQ KNQLQRLLQE FRRRLTTLQL DTQRMLEKAD SWVEKEEPAP 951 1000 ENSTTRP00000012099/1-916 SN bmy_00937T0/1-943 SN ENSP00000310670/1-923 SN ENSBTAP00000007194/1-916 SN