KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:28 2014 Check: 00 .. Name: ENSTTRP00000014676/1-573 Len: 574 Check: 370 Weight: 1.00 Name: ENSP00000265896/1-574 Len: 574 Check: 369 Weight: 1.00 Name: ENSBTAP00000007228/1-572 Len: 574 Check: 4485 Weight: 1.00 Name: bmy_07433T0/1-479 Len: 574 Check: 710 Weight: 1.00 Name: BACU013234/1-574 Len: 574 Check: 718 Weight: 1.00 // 1 50 ENSTTRP00000014676/1-573 MWTFLGIATF TYFYKKCGDF VSLANKELLL CVLVFLSLGL VLSYRCRYRN ENSP00000265896/1-574 MWTFLGIATF TYFYKKFGDF ITLANREVLL CVLVFLSLGL VLSYRCRHRN ENSBTAP00000007228/1-572 MWTFLGIATF TYFYKKCGDF VSLANKELLL CVLVFLSLGL VLSY--RYRS bmy_07433T0/1-479 MWTFLGIATF TYFYKKCGDF VSLANKELLL CVLVFLSLGL VLSYRCRYRN BACU013234/1-574 MWTFLGIATF TYFYKKCGDF VSLANKELLL CVLVFLSLGL VLSYRCRYRN 51 100 ENSTTRP00000014676/1-573 GALLGRQQSG SQFAVFSDIL SALPFIGFFW AKSPPGSENK EQLGSRRXXX ENSP00000265896/1-574 GGLLGRQQSG SQFALFSDIL SGLPFIGFFW AKSPPESENK EQLEARRRRK ENSBTAP00000007228/1-572 GALLGRRQSG SQLAGFSYIL SALPFIGFFW AKSPAGSENK EKLGSRRCKK bmy_07433T0/1-479 GALLGRRQSG SQFAVFSDIL SALPFIGFFW AKSPPGSENK EQLGSRRCKK BACU013234/1-574 GALLGRRQSG SQFAVFSDIL SALPFIGFFW AKSPPGSENK EQLGSRRCKK 101 150 ENSTTRP00000014676/1-573 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXDGRKVT ENSP00000265896/1-574 GTNISETSLI GTAACTSTSS QNDPEVIIVG AGVLGSALAA VLSRDGRKVT ENSBTAP00000007228/1-572 GTSISETTLI GTAASTLTSS QNDPEVIIVG SGVLGSALAA VLSRDGRKVT bmy_07433T0/1-479 GTSISETTLX GATASTLXSS QNDPEIIIVG SGVLGSALAA VLSRDGRKVT BACU013234/1-574 GTSISETTLI GATASTLISS QNDPEIIIVG SGVLGSALAA VLSRDGRKVT 151 200 ENSTTRP00000014676/1-573 VIERDLKEPD RILGEFLQPG GYHVLKDLGL EDTVEGIDAQ VVNGYIIHDQ ENSP00000265896/1-574 VIERDLKEPD RIVGEFLQPG GYHVLKDLGL GDTVEGLDAQ VVNGYMIHDQ ENSBTAP00000007228/1-572 VIERDLKEPD RILGEFLQPG GYYVLKDLGL EDTVEGIDAQ VVNGYIIHDQ bmy_07433T0/1-479 VIERDLKEPD RILGEFLQPG GYHVLKDLGL EDTVEGIDAQ VVNGYIIHDQ BACU013234/1-574 VIERDLKEPD RILGEFLQPG GYHVLKDLGL EDTVEGIDAQ VVNGYIIHDQ 201 250 ENSTTRP00000014676/1-573 ESKSEVQIPF PLSENSHVQS GRAFHHGRFI MSLRKAAMAE PXXXXXX-XX ENSP00000265896/1-574 ESKSEVQIPY PLSENNQVQS GRAFHHGRFI MSLRKAAMAE PNAKFIEGVV ENSBTAP00000007228/1-572 ESKTEVQIPF PLSENNHVQS GRAFHHGRFI MRLRKAAMAE PNAKFIEGTV bmy_07433T0/1-479 ESKSEVQIPF PLSENSHVQS GRAFHHGRFI MSLRKAAMAE PNTKFIEGTV BACU013234/1-574 ESKSEVQIPF PLSENSHVQS GRAFHHGRFI MSLRKAAMAE PNTKFIEGTV 251 300 ENSTTRP00000014676/1-573 XXXXXXXXXX XXXXXXXXXX XXXXELHAPL TVVADGLFSK FRKNLVANKV ENSP00000265896/1-574 LQLLEEDDVV MGVQYKDKET GDIKELHAPL TVVADGLFSK FRKSLVSNKV ENSBTAP00000007228/1-572 LQLLEEDDAV MGVQYKDKET GDIKELHAPL TVVADGLFSK FRKNLISNKV bmy_07433T0/1-479 LQLLEEDDAV MGVQYRDKET GDIKELHAPL TVVADGLFSK FRKNLIANKV BACU013234/1-574 LQLLEEDDAV MGVQYRDKET GDIKELHAPL TVVADGLFSK FRKNLIANKV 301 350 ENSTTRP00000014676/1-573 SVSSHFVGFL MKNAPQFKAN HAELILANPS PVLIYQISPN ETRVLVDVRG ENSP00000265896/1-574 SVSSHFVGFL MKNAPQFKAN HAELILANPS PVLIYQISSS ETRVLVDIRG ENSBTAP00000007228/1-572 SISSHFVGFL MENAPQFKAN HAELILANPS PVLIYQISPN ETRVLVDVRG bmy_07433T0/1-479 SVSSHFVGFL MKNAPQFKAN HAELILANPS PVLIYQISPN ETRVLVDIRG BACU013234/1-574 SVSSHFVGFL MKNAPQFKAN HAELILANPS PVLIYQISPD ETRVLVDIRG 351 400 ENSTTRP00000014676/1-573 EMPRNLREYM TENIYPQLPD HLKEPFLEAT QNSRLRSMPA SFLPSSPVNK ENSP00000265896/1-574 EMPRNLREYM VEKIYPQIPD HLKEPFLEAT DNSHLRSMPA SFLPPSSVKK ENSBTAP00000007228/1-572 DMPRNLREYM TENIYPQLPD HLKGPFLEAS QNSRLRSMPA SFLPSSPVNK bmy_07433T0/1-479 EMPRNLREYM TENIYPQLP- ---------- ---------- ---------- BACU013234/1-574 EMPRNLREYM TENIYPQLPD HLKEPFLEAT QNSRLRSMPA SFLPSSPVNK 401 450 ENSTTRP00000014676/1-573 QGVLLLGDAY NMRHPLTGGG MTVVFNDIKL WRKLLKGIPD LYDDAAVFQA ENSP00000265896/1-574 RGVLLLGDAY NMRHPLTGGG MTVAFKDIKL WRKLLKGIPD LYDDAAIFEA ENSBTAP00000007228/1-572 RGVLLLGDAY NMRHPLTGGG MTVVFNDIKL WRKLLKGIPD LYDDAAVFQA bmy_07433T0/1-479 -GVLLLGDAY NMRHPLTGGG MTVVFNDIKL WRXLLKXIPD LYDDAXVFQA BACU013234/1-574 QGVLLLGDAY NMRHPLTGGG MTVVFNDIKL WRKLLKGIPD LYDDAAVFQA 451 500 ENSTTRP00000014676/1-573 KKSFYWTRKT SHSFVVNILA QALYELFSAT DDSLHQLRKA CFLYFKLGGE ENSP00000265896/1-574 KKSFYWARKT SHSFVVNILA QALYELFSAT DDSLHQLRKA CFLYFKLGGE ENSBTAP00000007228/1-572 KKSFYWARKK SHSFVVNVLA QALYELFSAT DDSLHQLRKA CFFYFKLGGK bmy_07433T0/1-479 KKSFYWTRKT SHSFVVNILA QALYELFSAT DDSLHQLRKA CFLYFKLGGE BACU013234/1-574 KKSFYWTRKT SHSFVVNILA QALYELFSAT DDSLHQLRKA CFLYFKLGGE 501 550 ENSTTRP00000014676/1-573 CVAGPVGLLS VLTPNPLVLI GHFFAVAAYA TYFCFKSEPW ITKPRAIFSS ENSP00000265896/1-574 CVAGPVGLLS VLSPNPLVLI GHFFAVAIYA VYFCFKSEPW ITKPRALLSS ENSBTAP00000007228/1-572 CVAGPVGLLS VLSPNPLVLI GHFFGVAVYA TYFCFKSEPW ITKPRAIFSS bmy_07433T0/1-479 CVAGPVGLLS V--------- ---------- ---------- ---------- BACU013234/1-574 CVAGPVGLLS VLSPNPLVLI GHFFAVAAYA TYFCFKSEPW ITKPRAIFSS 551 600 ENSTTRP00000014676/1-573 GAVLYRACSV IFPLIYSEMK YLVH ENSP00000265896/1-574 GAVLYKACSV IFPLIYSEMK YMVH ENSBTAP00000007228/1-572 GAVLYRACSV IFPLIYSEMK YLVH bmy_07433T0/1-479 ---------- ---------- ---- BACU013234/1-574 GAVLYRACSV IFPLIYSEMK YLVH