KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:31:29 2014  Check: 00 ..

 Name: ENSP00000363943/1-220     Len:    224  Check:  547  Weight:  1.00
 Name: ENSBTAP00000007235/1-224  Len:    224  Check:  2335  Weight:  1.00
 Name: BACU015545/1-180          Len:    224  Check:  9856  Weight:  1.00
 Name: ENSTTRP00000011846/1-220  Len:    224  Check:  8461  Weight:  1.00
 Name: bmy_00571T0/1-180         Len:    224  Check:  9433  Weight:  1.00

//


                          1                                                   50
ENSP00000363943/1-220     MFQRLSSLFF STPSP-PEDP DCPRAFVSEE DEVDGWLIID LPDSYAAPPS 
ENSBTAP00000007235/1-224  MLQRLTSLFF SPPPPAAEDP DCSQAFVSEE DEVDGWLIID LPDSFTAPPS 
BACU015545/1-180          MLQRLTSLFF SSPAP-PEDP DCPRAFVSEE DEVDGWLIID L--------- 
ENSTTRP00000011846/1-220  MLQRLTSLFF SSPAP-PEDP DCPRAFVSEE DEVDGWLIID LADSFTAPPS 
bmy_00571T0/1-180         MLQRLTSLFF SSPAP-PEDP DCPRAFVSEE DEVDGWLIID L--------- 


                          51                                                 100
ENSP00000363943/1-220     PGAAPAPAGR PPPAPSLMDE SWFVTPPACF TAEGPGLGPA RLQSSPLEDL 
ENSBTAP00000007235/1-224  PGAAAAPAGR PPPAPSLMDE SWFVTPPACF TAEGPGLGPA RLQSSPLEDL 
BACU015545/1-180          ---------- ---------- ---------- -PEGPGPGPA RLQSSPLEDL 
ENSTTRP00000011846/1-220  PGAAPAPAGR PPPAPSLMDE SWFVTPPACF TAEGPGLGPA RLQSSPLEDL 
bmy_00571T0/1-180         ---------- ---------- ---------- -PEGPGLGPA RLQSSPLEDL 


                          101                                                150
ENSP00000363943/1-220     LIEHPSMSVY VTGSTIVLEP GSPSPLP--- DAALPDGDLS EGELTPARRE 
ENSBTAP00000007235/1-224  LIEHPSMSVY VTGSTIVLES GPPSPHPEDD EAALPDGDSS DGELAPARRE 
BACU015545/1-180          LIEHPSMSVY VSGSTIVLEP GPPSPHP--- DTALPDGDLS DGELAPARRE 
ENSTTRP00000011846/1-220  LIEHPSMSVY VTGSTIVLEP GPPSPHP--- DAALPDGDLR DGELAPARRE 
bmy_00571T0/1-180         LIEHPSMSVY VTGSTIVLEP GPPSPHP--- DAALPDGDLS DGELAPARRE 


                          151                                                200
ENSP00000363943/1-220     PRAARHAAPL PARAALLEKA GQVRRLQRAR QRAERHALSA KAVQRQNRAR 
ENSBTAP00000007235/1-224  ARALHHAAPL PARAALLEKA GQARRVQRAR QRAERHALSA KVVQRQNRAR 
BACU015545/1-180          PRALHHAAPL PARAALLEKA GQARRLQRAR QRAERHALSA KVVQRQNRAR 
ENSTTRP00000011846/1-220  PRALHHAAPL PARAILLEKA GQARRLQRAR QRAERHALSA KVVQRQNRAR 
bmy_00571T0/1-180         PRALHHGAPL PARAALLEKA GQARRLQRAR QRAERHALSA KVVQRQNRAR 


                          201                                                250
ENSP00000363943/1-220     ESRPRRSKNQ SSFIYQPCQR QFNY 
ENSBTAP00000007235/1-224  ESRPRRPKHQ GSFVYQPCQR QFNY 
BACU015545/1-180          ESRPRRPKHQ GSFVYQPCQR QFNY 
ENSTTRP00000011846/1-220  ESRPRRPKHQ GSFVYQPCQR QFNY 
bmy_00571T0/1-180         ESRPRRPKHQ GSFVYQPCQR QFNY