KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:29 2014 Check: 00 .. Name: ENSTTRP00000011815/1-673 Len: 969 Check: 72 Weight: 1.00 Name: ENSP00000348596/1-687 Len: 969 Check: 7814 Weight: 1.00 Name: ENSBTAP00000007240/1-688 Len: 969 Check: 7688 Weight: 1.00 Name: bmy_18618T0/1-578 Len: 969 Check: 6335 Weight: 1.00 Name: BACU000799/1-930 Len: 969 Check: 102 Weight: 1.00 // 1 50 ENSTTRP00000011815/1-673 ---------- ---------- ---------- ---------- ---------- ENSP00000348596/1-687 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007240/1-688 ---------- ---------- ---------- ---------- ---------- bmy_18618T0/1-578 ---------- ---------- ---------- ---------- ---------- BACU000799/1-930 MRKSGVPLLL GIIFLTLIGV QGTPTMRNGR CSCINTSQGT IHSKSLKDLK 51 100 ENSTTRP00000011815/1-673 ---------- ---------- ---------- ---------- ------MSSR ENSP00000348596/1-687 ---------- ---------- ---------- ---------- ------MSNR ENSBTAP00000007240/1-688 ---------- ---------- ---------- ---------- ------MSSR bmy_18618T0/1-578 ---------- ---------- ---------- ---------- ------MSNR BACU000799/1-930 QFAPSPSCEK TEIIATLKNG DQTCLNPDST DVIELIKEWE KQSAANMSNR 101 150 ENSTTRP00000011815/1-673 NNNKLPSNLP QLQNLIKRDP PAYVEEFLQQ YNHYKSNVEI FKLQPNKPSK ENSP00000348596/1-687 NNNKLPSNLP QLQNLIKRDP PAYIEEFLQQ YNHYKSNVEI FKLQPNKPSK ENSBTAP00000007240/1-688 NNNKLPSNLP QLQNLIKRDP PAYVEEFLQQ YNHYKSNVEI FKLQPNKPSK bmy_18618T0/1-578 NNNKLPSNLP QLQNLIKRDP PAYVEEFLQQ YNHYKSNVEI FKLQPNKPSK BACU000799/1-930 NNNKLPSNLP QLQNLIKRDP PAYGEEFLQQ YNHYKSNVEI FKLQPNKPSK 151 200 ENSTTRP00000011815/1-673 ELAELVMFMA QIGHCYPEHL SNFPQELKDL LSYNHTVLDP DLRMTFCKAL ENSP00000348596/1-687 ELAELVMFMA QISHCYPEYL SNFPQEVKDL LSCNHTVLDP DLRMTFCKAL ENSBTAP00000007240/1-688 ELAELVMFMA QISHCYPEHL SNFPQELKDL LSYNHTVLDP DLRMTFCKAL bmy_18618T0/1-578 ELAELVMFMA QIGHCYPEHL SNFPQELKDL LSYNHTVLDP DLRM------ BACU000799/1-930 ELAELVMFMA QIGHCYPEHL SNFPQELKDL LSYNHTVLDP DLRMTFCKAL 201 250 ENSTTRP00000011815/1-673 ILLRNKNLIN PSSLLELFFE LLRCHDKLLR KXXXXXXXXX XXXXXXXXXX ENSP00000348596/1-687 ILLRNKNLIN PSSLLELFFE LFRCHDKLLR KTLYTHIVTD IKNINAKHKN ENSBTAP00000007240/1-688 ILLRNKNLIN PSSLLELFFE LLRCHDKLLR KTLYTHIVTD IKNINAKHKN bmy_18618T0/1-578 ------NLIN PSSLLELFFE LLRCHDKLLR KTLYTHIVTD IKNINAKHKN BACU000799/1-930 ILLRNKNLIN PSSLLELFFE LLRCHDKLLR KTLYTHIVTD IKNINAKHKN 251 300 ENSTTRP00000011815/1-673 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXN DAKTVNVITT ENSP00000348596/1-687 NKVNVVLQNF MYTMLRDSNA TAAKMSLDVM IELYRRNIWN DAKTVNVITT ENSBTAP00000007240/1-688 NKVNIVLQNF MYTMLRDSNA TAAKISLDVM IELYRRNIWN DAKTVNVITT bmy_18618T0/1-578 NKVNVVLQNF MYTMLRDSNA TAAKISLDVM IELYRRNIWN DAKTVNVITT BACU000799/1-930 NKVNVVLQNF MYTMLRDSNA TAAKISLDVM IELYRRNIWN DAKTVNVITT 301 350 ENSTTRP00000011815/1-673 ACFSNVTKXX XXXXXXXXXX XXXXXXXXXX XXXDEGPTAR DLLVQYATGK ENSP00000348596/1-687 ACFSKVTKIL VAALTFFLGK DEDEKQDSDS ESEDDGPTAR DLLVQYATGK ENSBTAP00000007240/1-688 ACFSKVTKIL VAALTFFLGK DEEEKQDSDS ESEDEGPTAR DLLVQYATGK bmy_18618T0/1-578 ACFSKVTKIL VAALTFFLGK DEEEKQDSDS ESE------- ---------- BACU000799/1-930 ACFSKVTKIL VAALTFFLGK DEEEKQDSDS ESEDEGPTAR DLLVQYATGK 351 400 ENSTTRP00000011815/1-673 KSSKNKKKLE KAMKVLKKQK KKKKPEVFNF SAIHLIHDPQ DFAEKLLKQL ENSP00000348596/1-687 KSSKNKKKLE KAMKVLKKQK KKKKPEVFNF SAIHLIHDPQ DFAEKLLKQL ENSBTAP00000007240/1-688 KSSKNKKKLE KAMKVLTKHK KKKKPEVFNF SAIHLIHDPQ DFAEKLLKQL bmy_18618T0/1-578 ---------- -------KQK KRRKPEVFNF SAIHLIHDPQ DFAEKLLKQL BACU000799/1-930 KSSKNKKKLE KAMKVLKKQK KRRKPEVFNF SAIHLIHDPQ DFAEKLLKQL 401 450 ENSTTRP00000011815/1-673 ESSKERFEVK MMLMNLISRL VGIHELFLFN FYPFVQRFLQ PHQREVTKIL ENSP00000348596/1-687 ECCKERFEVK MMLMNLISRL VGIHELFLFN FYPFLQRFLQ PHQREVTKIL ENSBTAP00000007240/1-688 ESSKERFEVK MMLMNLISRL VGIHELFLFN FYPFVQRFLQ PHQREVTKIL bmy_18618T0/1-578 ESSKERFEVK MMLMNLISRL VGIH------ ---------- ---------- BACU000799/1-930 ESSKERFEVK MMLMNLISRL VGIH------ ---------- ---------- 451 500 ENSTTRP00000011815/1-673 LFAAQASHHL VPPEIMQSLL MTVANNFVTD KNSGEVMTVG INAIKEITAR ENSP00000348596/1-687 LFAAQASHHL VPPEIIQSLL MTVANNFVTD KNSGEVMTVG INAIKEITAR ENSBTAP00000007240/1-688 LFAAQASHHL VPPEIIQSLL MTVANNFVTD KNAGEVMTVG INAIKEITAR bmy_18618T0/1-578 ---------- ---EITQSLL MTVANNFVTD KNSGEVMTVG INAIKEITAR BACU000799/1-930 ---------- ---EITQSLL MTVANNFVTD KNSGEVMTVG INAIKEITAR 501 550 ENSTTRP00000011815/1-673 CPLAMTEELL QDLAQYKTHK DKNVMMSART LIQL----FR TLNPQMLQKK ENSP00000348596/1-687 CPLAMTEELL QDLAQYKTHK DKNVMMSART LIHL----FR TLNPQMLQKK ENSBTAP00000007240/1-688 CPLAMTEELL QDLAQYKTHK DKNVMMSART LIQL----FR TLNPQMLQKK bmy_18618T0/1-578 CPLAMTEELL QDLAQYKTHK DKNVMMSART LIQL----FR TLNPQMLQKK BACU000799/1-930 CPLAMTEELL QDLAQYKTHR DKNVMMSART LIQLFXXXFR TLNPQMLQKK 551 600 ENSTTRP00000011815/1-673 FRGKPTEASI EARVQEYGEL DAKDYIPGAE VLEVEKEEKN AEDDEDEWEN ENSP00000348596/1-687 FRGKPTEASI EARVQEYGEL DAKDYIPGAE VLEVEKEE-N AENDEDGWES ENSBTAP00000007240/1-688 FRGKPTEASI EARVQEYGEL DAKDYIPGAE ILEVENEEEN AEGDEDGWES bmy_18618T0/1-578 FRGKPTEASI EARVQEYGEL DAKDYIPGAE VLEVEKEEKN AEDDEDEWEN BACU000799/1-930 FRGKPTEAST EARVQEYGEL DTKDYIPGAE VLEVEKEEKN AEDDEDEWEN 601 650 ENSTTRP00000011815/1-673 TSLSDEAVSD GEWVDVHHSS DEEQKEISEK LNSMPLEERK AKAAAVSTSR ENSP00000348596/1-687 TSLSEEEDAD GEWIDVQHSS DEEQQEISKK LNSMPMEERK AKAAAISTSR ENSBTAP00000007240/1-688 ASLSDEADSD GEWVDVHHSS DEEQKEISEK LNSMPLEERK AKAAAVSTSR bmy_18618T0/1-578 TSLSDEAVSD GEWVDVRHSS DEEQKEISEK LNSMPLEERK AKAAAVSTSR BACU000799/1-930 TSLSDEAVSD GEWVDVHHSS DEEQKEISEK LNSMPLEERK AKAAAVSTSR 651 700 ENSTTRP00000011815/1-673 VLSQEDFQKI RMAQMRKELD AAPGKAQKRK YVEIDSDEEP RGELLSLRDI ENSP00000348596/1-687 VLTQEDFQKI RMAQMRKELD AAPGKSQKRK YIEIDSDEEP RGELLSLRDI ENSBTAP00000007240/1-688 VLSQEDFQKI RMAQMRKELD AAPGKAQKRK YIEIDSDEER RGELLSLRDI bmy_18618T0/1-578 VLSQEDFQKI RMAQMRKELD AAPGKAQKRQ YIEIDSDEEP RGELLSLRDI BACU000799/1-930 VLSQEDFQKI RMAQMRKELD AAPGKAQKRK YIEIDSDEEP RGELLSLRDI 701 750 ENSTTRP00000011815/1-673 ERLHKKPKSD KETRLATAMA GKTDRKEFVR RKTKMNPFSS STNKEKKKQK ENSP00000348596/1-687 ERLHKKPKSD KETRLATAMA GKTDRKEFVR KKTKTNPFSS STNKEKKKQK ENSBTAP00000007240/1-688 ERLHKKPKSD KETRLATAMA GKTDRKEFVR KKTKMNPFSS STNKEKKKQK bmy_18618T0/1-578 ERLHKKPKSD KETRLATAM- ---------- ---------- ----EKKKQK BACU000799/1-930 ERLHKKPKSD KETRLATAMA GKTDRKEFVR RKTKMNPFSS STNKEKKKQK 751 800 ENSTTRP00000011815/1-673 NFMMMRYSHN VRSKNKRSFR EKQ------- ---------- ---------- ENSP00000348596/1-687 NFMMMRYSQN VRSKNKRSFR EKQL--ALRD ALLKKRKRMK ---------- ENSBTAP00000007240/1-688 NFMMMRYSHN VRSKNKRSFR EKQL--ALRD ALLKKRKRMK ---------- bmy_18618T0/1-578 NFMMMRYSHN VRSKNKRSFR EKQL--ALRD ALLKKRKRMK ---------- BACU000799/1-930 NFMMMRYSHN VRSKNKRSFR EKQAIKGFRN APVGIRHRMR GSVNAVRIRA 801 850 ENSTTRP00000011815/1-673 ---------- ---------- ---------- ---------- ---------- ENSP00000348596/1-687 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007240/1-688 ---------- ---------- ---------- ---------- ---------- bmy_18618T0/1-578 ---------- ---------- ---------- ---------- ---------- BACU000799/1-930 PRIGGSFAVR WSLFSTIDCG LVRLRGKEDP WNSITGGALT RAVLAACSGP 851 900 ENSTTRP00000011815/1-673 ---------- ---------- ---------- ---------- ---------- ENSP00000348596/1-687 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007240/1-688 ---------- ---------- ---------- ---------- ---------- bmy_18618T0/1-578 ---------- ---------- ---------- ---------- ---------- BACU000799/1-930 SATVGSAKTG SIPLALIEDG GILLNRSSCS SSALHPHSWR TPASCPLRRV 901 950 ENSTTRP00000011815/1-673 ---------- ---------- ---------- ---------- ---------- ENSP00000348596/1-687 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007240/1-688 ---------- ---------- ---------- ---------- ---------- bmy_18618T0/1-578 ---------- ---------- ---------- ---------- ---------- BACU000799/1-930 PRPQATPAIS NTTEDVTACH RHHGSSSSVP SLMIYLKGRS GSQLVLGPSR 951 1000 ENSTTRP00000011815/1-673 ---------- --------- ENSP00000348596/1-687 ---------- --------- ENSBTAP00000007240/1-688 ---------- --------- bmy_18618T0/1-578 ---------- --------- BACU000799/1-930 EGLYSVALSQ VWGGAPQLP