KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:30 2014 Check: 00 .. Name: bmy_02975T0/1-523 Len: 561 Check: 3843 Weight: 1.00 Name: BACU014136/1-550 Len: 561 Check: 7352 Weight: 1.00 Name: ENSP00000264279/1-529 Len: 561 Check: 2334 Weight: 1.00 Name: ENSTTRP00000005687/1-529 Len: 561 Check: 3876 Weight: 1.00 Name: ENSBTAP00000007254/1-529 Len: 561 Check: 5886 Weight: 1.00 // 1 50 bmy_02975T0/1-523 MLVLFETSVG YAIFKVLNEK KLQEVDSLWK EFETPEKANK IVKLKHFEKF BACU014136/1-550 MLVLFETSVG YAIFKVLNEK KLQEVDSLWK EFETPEKANK IVKLKHFEKF ENSP00000264279/1-529 MLVLFETSVG YAIFKVLNEK KLQEVDSLWK EFETPEKANK IVKLKHFEKF ENSTTRP00000005687/1-529 MLVLFETSVG YAIFKVLNEK KLQEVDSLWK EFETPEKANK IVKLKHFEKF ENSBTAP00000007254/1-529 MLVLFETSVG YAIFKVLNEK KLQEVDSLWK EFETPEKANK IVKLKHFEKF 51 100 bmy_02975T0/1-523 QDTAEALAAF TALMEGKINK QLKKVLKKIV KEAHEPLAVA DAKLGGVIKE BACU014136/1-550 QDTAEALAAF TALMEGKINK QLKKVLKKIV KEAHEPLAVA DAKLGGVIKE ENSP00000264279/1-529 QDTAEALAAF TALMEGKINK QLKKVLKKIV KEAHEPLAVA DAKLGGVIKE ENSTTRP00000005687/1-529 QDTAEALAAF TALMEGKINK QLKKVLKKIV KEAHEPLAVA DAKLGGVIKE ENSBTAP00000007254/1-529 QDTAEALAAF TALMEGKINK QLKKVLKKIV KEAHEPLAVA DAKLGGVIKE 101 150 bmy_02975T0/1-523 --TFSSLFDT DVLVLIGKAE SQF------- ---------- -----LSRYR BACU014136/1-550 KLNLSCIHSP LVNELMRGIR SQMDGLIPGV EPREMAAMCL GLAHSLSRYR ENSP00000264279/1-529 KLNLSCIHSP VVNELMRGIR SQMDGLIPGV EPREMAAMCL GLAHSLSRYR ENSTTRP00000005687/1-529 KLNLSCIHSP LVNELMRGIR SQMDGLIPGV EPREMAAMCL GLAHSLSRYR ENSBTAP00000007254/1-529 KLNLSCIHSP VVNELMRGIR SQMDGLIPGV EPREMTAMCL GLAHSLSRYR 151 200 bmy_02975T0/1-523 LKFSADKVDT MIVQAISLLD DLDKELNNYI MRCREWYGWH FPELGKIISD BACU014136/1-550 LKFSADKVDT MIVQAISLLD DLDKELNNYI MRCREWYGWH FPELGKIISD ENSP00000264279/1-529 LKFSADKVDT MIVQAISLLD DLDKELNNYI MRCREWYGWH FPELGKIISD ENSTTRP00000005687/1-529 LKFSADKVDT MIVQAISLLD DLDKELNNYI MRCREWYGWH FPELGKIISD ENSBTAP00000007254/1-529 LKFSADKVDT MIVQAISLLD DLDKELNNYI MRCREWYGWH FPELGKIISD 201 250 bmy_02975T0/1-523 NLTYCKCLQK VGDRKNYASA TLSELLPEEV EAEVKAAAEI SMGTEVSEED BACU014136/1-550 NLTYCKCLQK VGDRKNYASA TLSELLPEEV EAEVKAAAEI SMGTEVSEED ENSP00000264279/1-529 NLTYCKCLQK VGDRKNYASA KLSELLPEEV EAEVKAAAEI SMGTEVSEED ENSTTRP00000005687/1-529 NLTYCKCLQK VGDRKNYASA TLSELLPEEV EAEVKAAAEI SMGTEVSEED ENSBTAP00000007254/1-529 NLTYCKCLQK VGDRKNYASA QLSELLPEEV EAEVKAAAEI SMGTEVSEED 251 300 bmy_02975T0/1-523 ICNILHLCTQ VIEISEYRTQ LYEYLQNRMM AIAPNVTVMV GELVGARLIA BACU014136/1-550 ICNILHLCTQ VIEISEYRTQ LYEYLQNRMM AIAPNVTVMV GELVGARLIA ENSP00000264279/1-529 ICNILHLCTQ VIEISEYRTQ LYEYLQNRMM AIAPNVTVMV GELVGARLIA ENSTTRP00000005687/1-529 ICNILHLCTQ VIEISEYRTQ LYEYLQNRMM AIAPNVTVMV GELVGARLIA ENSBTAP00000007254/1-529 ICNILHLCTQ VIEISEYRTQ LYEYLQNRMM AIAPNVTVMV GELVGARLIA 301 350 bmy_02975T0/1-523 HAGSLLNLAK HAASTVQILG AEKALFRALK SRRDTPKYGL IYHASLVGQT BACU014136/1-550 HAGSLLNLAK HAASTVQILG AEKALFRALK SRRDTPKYGL IYHASLVGQT ENSP00000264279/1-529 HAGSLLNLAK HAASTVQILG AEKALFRALK SRRDTPKYGL IYHASLVGQT ENSTTRP00000005687/1-529 HAGSLLNLAK HAASTVQILG AEKALFRALK SRRDTPKYGL IYHASLVGQT ENSBTAP00000007254/1-529 HAGSLLNLAK HAASTVQILG AEKALFRALK SRRDTPKYGL IYHASLVGQT 351 400 bmy_02975T0/1-523 SPKHKGKISR MLAAKTVLAI RYDAFGEDSS SAMGVENRAK LEARLRTLED BACU014136/1-550 SPKHKGKISR MLAAKTVLAI RYDAFGEDSS SAMGVENRAK LEARLRTLED ENSP00000264279/1-529 SPKHKGKISR MLAAKTVLAI RYDAFGEDSS SAMGVENRAK LEARLRTLED ENSTTRP00000005687/1-529 SPKHKGKISR MLAAKTALAI RYDAFGEDSS SAMGVENRAK LEARLRTLED ENSBTAP00000007254/1-529 SPKHKGKISR MLAAKTVLAI RYDAFGEDSS SAMGVENRAK LEARLRTLED 401 450 bmy_02975T0/1-523 RGIRKISGTG KALAKAEKYE HKRDFLKFYG SFSEVKTYDP SGDSTLPTCS BACU014136/1-550 RGIRKISGTG KALAKAEKYE HK-------- --SEVKTYDP SGDSTLPTCS ENSP00000264279/1-529 RGIRKISGTG KALAKTEKYE HK-------- --SEVKTYDP SGDSTLPTCS ENSTTRP00000005687/1-529 RGIRKISGTG KALAKAEKYE HK-------- --SEVKTYDP SGDSTLPTYS ENSBTAP00000007254/1-529 RGIRKISGTG KALAKAEKYE HK-------- --SEVKTYDP SGDSTLPTYS 451 500 bmy_02975T0/1-523 KKRKIEQVDK EDEVVEKKAK KAKVKIKVEE EEEVVEVEED VVEVVEEQET BACU014136/1-550 KKRKIEQVDK EDEVVEKKAK KAKVKIKVEE EEEVVEVEED VVEVVEEQET ENSP00000264279/1-529 KKRKIEQVDK EDEITEKKAK KAKIKVKVEE EEE------- -EKVAEEEET ENSTTRP00000005687/1-529 KKRKIEQVDK EDEVVEKKAK KAKVKIKVEE EEE------- -VEVVEEQET ENSBTAP00000007254/1-529 KKRKIEQVDK EDEVIEKKAK KAKVKIKDTE EEG------- -VQVVEEQET 501 550 bmy_02975T0/1-523 SVKKKKKKDK KKHIKEEPLS EEEPCTSTAI ASPEKKKKKK K--------- BACU014136/1-550 SVKKKKKKDK KKHIKEEPLS EEEPCTSTAI AVCLFLITNT LLTWAGFLYF ENSP00000264279/1-529 SVKKKKKRGK KKHIKEEPLS EEEPCTSTAI ASPEKKKKKK K--------- ENSTTRP00000005687/1-529 SVKKKKKKDK KKHIKEEPLS EEEPCTSTAI ASPEKKKKKK K--------- ENSBTAP00000007254/1-529 SVKKKKKKDK KKHVKEEPLS EEEPCTSTAV ASPEKKKKKK K--------- 551 600 bmy_02975T0/1-523 -----KRVNE D BACU014136/1-550 ILLCILQMNR - ENSP00000264279/1-529 -----KRENE D ENSTTRP00000005687/1-529 -----KRVNE D ENSBTAP00000007254/1-529 -----KKVNE D