KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:30 2014 Check: 00 .. Name: bmy_02856T0/1-344 Len: 517 Check: 5999 Weight: 1.00 Name: ENSBTAP00000007260/1-432 Len: 517 Check: 2044 Weight: 1.00 Name: ENSP00000259605/1-515 Len: 517 Check: 5988 Weight: 1.00 Name: ENSTTRP00000005706/1-495 Len: 517 Check: 629 Weight: 1.00 Name: BACU019101/1-487 Len: 517 Check: 2094 Weight: 1.00 // 1 50 bmy_02856T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007260/1-432 ---------- ---------- ---------- ---------- ---------- ENSP00000259605/1-515 MACKISPGAN SASLPGHPNK VICERVRLQS LFPLLPSDQN TTVQEDAHFK ENSTTRP00000005706/1-495 RTCKISPGAN SAPLPGHPNK VICERVRLQS LFPLLPSDQN TTIQEDAHFK BACU019101/1-487 ---QISPGAN SAPLPGHPNK VICERVRLQS LFPLLPSDQN TTVQEDAHFK 51 100 bmy_02856T0/1-344 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007260/1-432 ---------- ---------- ---------- ---MRPWEMT SNRQPPSVRP ENSP00000259605/1-515 AFFQSEDSPS PKRQRLSHSV FDYTSASPAP SPPMRPWEMT SNRQPPSVRP ENSTTRP00000005706/1-495 AFFQSEDSPS PKRQRLSHSV FDYTSASPAP SPPMRPWEMT SNRQPPSVRP BACU019101/1-487 AFFQSEDSPS PKRQRLSHSV FDYTSASPAP SPPMRPWEMT SNRQPPSVRP 101 150 bmy_02856T0/1-344 ---------- ---------- ---------- ---MENDVG- ---------- ENSBTAP00000007260/1-432 SQHHFSGERC NTPARNRRSP PVRRQRGRRD RQSRLNSISQ DENYHHLPYA ENSP00000259605/1-515 SQHHFSGERC NTPARNRRSP PVRRQRGRRD RLSRHNSISQ DENYHHLPYA ENSTTRP00000005706/1-495 SQHHFSGERC NTPARNRRSP PVRRQRGRRD RLSRHNSISQ DENYHHLPYA BACU019101/1-487 SQHHFSGERC NTPARNRRSP PVRRQRGRRD RLSRHNSISQ DENYHHLPYA 151 200 bmy_02856T0/1-344 ---------- ---------- ---------E HVINIDFFQI GRLHQGTVPV ENSBTAP00000007260/1-432 QQQAIEEPRA FHPPNVSPRL LHPAAHPPQQ NAVMVDIHD- -QLHQGTVPV ENSP00000259605/1-515 QQQAIEEPRA FHPPNVSPRL LHPAAHPPQQ NAVMVDIHD- -QLHQGTVPV ENSTTRP00000005706/1-495 QQQAIEEPRA FHPPNVSPRL LHPAAHPSQQ NAVMVDIHD- -QLHQGTVPV BACU019101/1-487 QQQAIEEPRA FHPPNVSPRL LHPAAHPPQQ NAVMVDIHD- -QLHQGTVPV 201 250 bmy_02856T0/1-344 SYTVTTVAPH GIPLCTGQHI PACSTQQVPG CSVVFSGQHL PVCSVPPPML ENSBTAP00000007260/1-432 SYTVTTVAPH GIPLCTGQHI PACSTQQVPG CSVVFSGQHL PVCSVPPPML ENSP00000259605/1-515 SYTVTTVAPH GIPLCTGQHI PACSTQQVPG CSVVFSGQHL PVCSVPPPML ENSTTRP00000005706/1-495 SYTVTTVAPH GIPLCTGQHI PACSTQQVPG CSVVFSGQHL PVCSVPPPML BACU019101/1-487 SYTVTTVAPH GIPLCTGQHI PACSTQQVPG CSVVFSGQHL PVCSVPPPML 251 300 bmy_02856T0/1-344 QACSVQHLPV PYAAFPPLIS SDPFLLHPPH LSPHHPPHLP PPGQFVPFQT ENSBTAP00000007260/1-432 QACSVQHLPV PYAAFPPLIS SDPFILHPPH LSPHHPPHLP PPSQFVPFQT ENSP00000259605/1-515 QACSVQHLPV PYAAFPPLIS SDPFLIHPPH LSPHHPPHLP PPGQFVPFQT ENSTTRP00000005706/1-495 QACSVQHLPV PYAAFPPLIS SDPFLLHPPH LSPHHPPHLP PPGQFVPFQT BACU019101/1-487 QACSVQHLPV PYAAFPPLIS SDPFLLHPPH LSPHHPPHLP PPGQFVPFQT 301 350 bmy_02856T0/1-344 QQSRSPLQRI ENEVELLGXH LPVGGFTYPP SAHPPTLPPS APLQFLTHDP ENSBTAP00000007260/1-432 QQSRSPLQRI ENEVELLGEH LPVGGFTYPP SAHPPTLPPS APLQFLTHDP ENSP00000259605/1-515 QQSRSPLQRI ENEVELLGEH LPVGGFTYPP SAHPPTLPPS APLQFLTHDP ENSTTRP00000005706/1-495 QQSRSPLQRI ENEVELLGEH LPVGGFTYPP SAHPPTLPPS APLQFLTHDP BACU019101/1-487 QQSRSPLQRI ENEVELLGEH LPVGGFTYPP SAHPPTLPPS APLQFLTHDP 351 400 bmy_02856T0/1-344 LHQEVSFGVS YPPFMPRRLT GRSRYRSQQP IPPPPYHPSL LPYVLSMLPV ENSBTAP00000007260/1-432 LHQEVSYGVP YPPFMPRRLT GRSRYRSQQP IPPPPYHPSL LPYVLSMLPV ENSP00000259605/1-515 LHQEVSFGVP YPPFMPRRLT GRSRYRSQQP IPPPPYHPSL LPYVLSMLPV ENSTTRP00000005706/1-495 LHQEVSFGVS YPPFMPRRLT GRSRYRSQQP IPPPPYHPSL LPYVLSMLPV BACU019101/1-487 LHQEVSFGVS YPPFMPRRLT GRSRYRSQQP IPPPPYHPSL LPYVLSMLPV 401 450 bmy_02856T0/1-344 PPAVGPTFSF ELDVEDGEVE NYEALLNLAE RLGEAKPRGL TKADIEQLPS ENSBTAP00000007260/1-432 PPAVGPTFSF ELDVEDGEVE NYEALLNLAE RLGEAKPRGL TKADIEQLPS ENSP00000259605/1-515 PPAVGPTFSF ELDVEDGEVE NYEALLNLAE RLGEAKPRGL TKADIEQLPS ENSTTRP00000005706/1-495 PPAVGPTFSF ELDVEDGEVE NYEALLNLAE RLGEAKPRGL TKADIEQLPS BACU019101/1-487 PPAVGPTFSF ELDVEDGEVE NYE-----VK RLGEAKPRGL TKADIEQLPS 451 500 bmy_02856T0/1-344 YRFNPNNHQS EQTLCVVCMC DFESRQLLRV LPCNHEFHAK CVDKWLKANR ENSBTAP00000007260/1-432 YRFNPNNHQS EQTLCVVCMC DFESRQLLRV LPCNHEFHAK CVDKWLKANR ENSP00000259605/1-515 YRFNPNNHQS EQTLCVVCMC DFESRQLLRV LPCNHEFHAK CVDKWLKANR ENSTTRP00000005706/1-495 YRFNPNNHQS EQTLCVVCMC DFESRQLLRV LPCNHEFHAK CVDKWLK--- BACU019101/1-487 YRFNPNNHQS EQTLCVVCMC DFESRQLLRV LPCNHEFHAK CVDKWLK--- 501 550 bmy_02856T0/1-344 TCPICRADAS EVHRDSE ENSBTAP00000007260/1-432 TCPICRADAS EVHRDSE ENSP00000259605/1-515 TCPICRADAS EVHRDSE ENSTTRP00000005706/1-495 ---------- ------- BACU019101/1-487 ---------- -------