KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:31:36 2014  Check: 00 ..

 Name: bmy_06165T0/1-134         Len:    229  Check:  8292  Weight:  1.00
 Name: ENSP00000379201/1-229     Len:    229  Check:  251  Weight:  1.00
 Name: ENSTTRP00000003916/1-226  Len:    229  Check:  2696  Weight:  1.00
 Name: ENSBTAP00000007295/1-229  Len:    229  Check:  932  Weight:  1.00

//


                          1                                                   50
bmy_06165T0/1-134         MAAPLESSGE DQLRNFVRVL EKRDGTVLRL QQYGSGGVGC VVWDAAIVLS 
ENSP00000379201/1-229     MADTLESSLE DPLRSFVRVL EKRDGTVLRL QQYSSGGVGC VVWDAAIVLS 
ENSTTRP00000003916/1-226  MAASLESSGE EQLRNFVRVL EKRDGTVLRL QQYGSGGVGC VVWDAAIVLS 
ENSBTAP00000007295/1-229  MAASLESSGE DPLRNFVRVL EKRDGTVLRL QQYGSGGVGC VVWDAAIVLS 


                          51                                                 100
bmy_06165T0/1-134         KYLETPEFSG DGTHALSRRS VLELGSGTGA VGLMAATFGA DVIVTDLEEL 
ENSP00000379201/1-229     KYLETPEFSG DGAHALSRRS VLELGSGTGA VGLMAATLGA DVVVTDLEEL 
ENSTTRP00000003916/1-226  KYLETPGFSG DGAHALSRRS VLELGSGTGA VGLMAATLGA DVIVTDLEEL 
ENSBTAP00000007295/1-229  KYLETPGFSG DGAHALSRRS VLELGSGTGA VGLMAATLGA DVIVTDLEEL 


                          101                                                150
bmy_06165T0/1-134         QDLLKMNINM NKHLVTGSVQ AKVLKW---- --FVWP---- ---------- 
ENSP00000379201/1-229     QDLLKMNINM NKHLVTGSVQ AKVLKWGEEI EGFPSPPDFI LMADCIYYEE 
ENSTTRP00000003916/1-226  QDLLKMNINM NKHLVTGSVQ AKVLKWGEEI EDFPSPPDYI LMADCIYYEE 
ENSBTAP00000007295/1-229  QDLLKMNINM NKHLVTGSVQ AKVLKWGEEL EDFPSPPDYI LMADCIYYEE 


                          151                                                200
bmy_06165T0/1-134         ---------- ---------- ---------- --------FS LF-------- 
ENSP00000379201/1-229     SLEPLLKTLK DISGFETCII CCYEQRTMGK NPEIEKKYFE LLQLDFDFEK 
ENSTTRP00000003916/1-226  SLEPLLKTLK DLSGSETCII CCYEQRTMGK NPEIEKKYFE LLQLDFDFEK 
ENSBTAP00000007295/1-229  SLEPLLKTLK DLSGSETCII CCYEQRTMGK NPEIEKKYFE LLQLDFDFEK 


                          201                                                250
bmy_06165T0/1-134         ---------- ---------- --------- 
ENSP00000379201/1-229     IPLEKHDEEY RSEDIHIIYI RKKKSKFPS 
ENSTTRP00000003916/1-226  IPL-KHD-EY RSEDIHILYI REK-SKFPS 
ENSBTAP00000007295/1-229  IPLEKHDEEY RSEDIHILYI RKKNSKFPS