KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:39 2014 Check: 00 .. Name: ENSTTRP00000003810/1-552 Len: 555 Check: 4451 Weight: 1.00 Name: ENSP00000371627/1-554 Len: 555 Check: 5647 Weight: 1.00 Name: bmy_02753T0/1-542 Len: 555 Check: 6793 Weight: 1.00 Name: ENSBTAP00000007323/1-550 Len: 555 Check: 116 Weight: 1.00 Name: BACU009177/1-550 Len: 555 Check: 9198 Weight: 1.00 // 1 50 ENSTTRP00000003810/1-552 MSADGGGIRA TQDKEGAPET PGHGHSCQEM LSESEGTVPL GAAQESPHIK ENSP00000371627/1-554 MSADGGGIQD TQDKETPPEV PDRGHPHQEM PSKLGEAVPS GDTQESLHIK bmy_02753T0/1-542 MSADGGGIRA TQDKERAQET PGHGHSCQEM LSESEGTVPL GAAQGSPHIK ENSBTAP00000007323/1-550 MSADDGGIRA AQDKERARET PGHGHSCQEM LSESEGTVPL GEARESPHIK BACU009177/1-550 MSADGGGIRA TQDKERAQET PGHGHSCQEM LSESEGTVPL GAAQESPHIK 51 100 ENSTTRP00000003810/1-552 MEPEEPHPEG ASQEARAQGV RGWVPLSQGS KEKSHFLPGG ALPSPQISVL ENSP00000371627/1-554 MEPEEPHSEG ASQEDGAQGA WGWAPLSHGS KEKALFLPGG ALPSPRIPVL bmy_02753T0/1-542 MEPEEPHPEG ASQEARAQGA RGWVPLSQGS KEKAHFLPGG ---DPCALSR ENSBTAP00000007323/1-550 MEPEEPHPEG VSQETRAEGA RGWVPLSQGT KEKVCFLPGG ALPAPQTPVL BACU009177/1-550 MEPEEPHPEG ASQEARAQGA RGWVPLSQGS KEKAHFLPGG ALPSPQIPVL 101 150 ENSTTRP00000003810/1-552 SHEGRTRDRR MAAALLTAWS QMPVTFEDVA VYLSREEWGR LDHTQQSFYR ENSP00000371627/1-554 SREGRTRDRQ MAAALLTAWS QMPVTFEDVA LYLSREEWGR LDHTQQNFYR bmy_02753T0/1-542 GEDQRPADGH GAPHCLVP-E LHPLFFCSIT ---SPGRW-R VVSPCCAARK ENSBTAP00000007323/1-550 SREGRTRDRQ MAAALLTAWS QMPVTFEDMA LYLSREEWGR LDHTQQSFYR BACU009177/1-550 SHEGRTRDRR MAAALLTAWS QMPVTFEDVA VYLSREEWGR LDHTQQSFYR 151 200 ENSTTRP00000003810/1-552 DILQKRNGLS LXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXX-XXXXX ENSP00000371627/1-554 DVLQKKNGLS LGFPFSRPFW APQAHGKGEA SGSSRQAGDE KEWRGACTGA bmy_02753T0/1-542 ALTEHSISSQ AGFPFSRPFW ASQVQGKGEA SGSCQQMGDE EEEK---RGA ENSBTAP00000007323/1-550 EVLQKRSGLS LGFPFSRPFW ASQVQGKGEA PGSSRQLGHE EEEK---RGV BACU009177/1-550 DVLQKRNGLS LGFPFSRPFW ASQVQGKGEA SGSCQQMGDE EEEK---RGA 201 250 ENSTTRP00000003810/1-552 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000371627/1-554 VEVGQRVQTS SVAALGNVKP FRTRAGRVQW GVPQCAQEAA CGRSSGPAKD bmy_02753T0/1-542 VEVGKEELAP SLGAFGDMKS FKSRVGRAQG DAPRCGQRAV GGQSSGPAKD ENSBTAP00000007323/1-550 VEVDKEELAA SLGALGDAKS FKSRMGRAQG EAPRCGQRAA SGQNSGPAKD BACU009177/1-550 VEVGKEELAP SLGALGDMKS FKSRVGRAQG DAPWCGQRAV GGQSSGPAKD 251 300 ENSTTRP00000003810/1-552 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000371627/1-554 SGQPAEPDRT P-DAAPPDPS PTEPQEYRVP EKPNEEEKGA PESGEEGLAP bmy_02753T0/1-542 DVQPGPAEEA QSEPAPPDIG IPKAQEGRFP EQPREGETTA PESSEAGLAP ENSBTAP00000007323/1-550 DVQPCPVKEA QLESAPPDTD LPKTQEGHFP EQPREGGTAA PESSEEGLAL BACU009177/1-550 DVQPGPAEEA QSEPAPPDIS IPKAQEGRFP EQPREGETTA PESSEEGLAP 301 350 ENSTTRP00000003810/1-552 XXXXXXXXXX XXXXXXXXXX XXXXXXHRRT HTGEKPYACT DCGKRFGRSS ENSP00000371627/1-554 DSEVGRKSYR CEQCGKGFSW HSHLVTHRRT HTGEKPYACT DCGKRFGRSS bmy_02753T0/1-542 DGDAGKKTYK CEQCGKAFSW HSHLVTHRRT HTGEKPYACT DCGKRFGRSS ENSBTAP00000007323/1-550 DSEAGKKTFK CEQCGKAFSW HSHLVTHRRT HTGEKPYACT DCGKRFGRSS BACU009177/1-550 DGDAGKKTYK CEQCGKAFSW HSHLVTHRRT HTGEKPYACT DCGKRFGRSS 351 400 ENSTTRP00000003810/1-552 HLIQHQIIHT GEKPYTCPSC WKSFSHHSTL IQHQRIHTGE KPYVCDRCAK ENSP00000371627/1-554 HLIQHQIIHT GEKPYTCPAC RKSFSHHSTL IQHQRIHTGE KPYVCDRCAK bmy_02753T0/1-542 HLIQHQIIHT GEKPYTCPSC WKSFSHHSTL IQHQRIHTGE KPYVCDRCAK ENSBTAP00000007323/1-550 HLIQHQIIHT GEKPYTCPSC WKSFSHHSTL IQHQRIHTGE KPYVCDRCAK BACU009177/1-550 HLIQHQIIHT GEKPYTCPSC WKSFSHHSTL IQHQRIHTGE KPYVCDRCAK 401 450 ENSTTRP00000003810/1-552 RFTRRSDLVT HQGTHTGAKP HKCPICGKCF TQSSALVTHQ RTHTGVKPYP ENSP00000371627/1-554 RFTRRSDLVT HQGTHTGAKP HKCPICAKCF TQSSALVTHQ RTHTGVKPYP bmy_02753T0/1-542 RFTRRSDLVT HQGTHTGAKP HKCPICGKCF TQSSALVTHQ RTHTGVKPYP ENSBTAP00000007323/1-550 RFTRRSDLVT HQGTHTGAKP HKCPICGKCF TQSSALVTHQ RTHTGVKPYP BACU009177/1-550 RFTRRSDLVT HQGTHTGAKP HKCPICGKCF TQSSALVTHQ RTHTGVKPYP 451 500 ENSTTRP00000003810/1-552 CPECGKCFSQ RSNLIAHNRT HTGEKPYHCL DCGKSFSHSS HLTAHQRTHR ENSP00000371627/1-554 CPECGKCFSQ RSNLIAHNRT HTGEKPYHCL DCGKSFSHSS HLTAHQRTHR bmy_02753T0/1-542 CPECGKCFSQ RSNLIAHNRT HTGEKPYHCL DCGKSFSHSS HLTAHQRTHR ENSBTAP00000007323/1-550 CPECGKCFSQ RSNLIAHNRT HTGEKPYHCL DCGKSFSHSS HLTAHQRTHR BACU009177/1-550 CPECGKCFSQ RSNLIAHNRT HTGEKPYHCL DCGKSFSHSS HLTAHQRTHR 501 550 ENSTTRP00000003810/1-552 GVRPYSCPLC GKSFSRRSNL HRHEKIHTAG PKALAMLMLG --AAGALAAP ENSP00000371627/1-554 GVRPYACPLC GKSFSRRSNL HRHEKIHTTG PKALAMLMLG AAAAGALATP bmy_02753T0/1-542 GVRPYSCPLC GKSFSRRSNL HRHEKIHTAG PKALAMLMLG --AAGALAAP ENSBTAP00000007323/1-550 GVRPYSCPLC GKSFSRRSNL HRHEKIHTAG PKALAMLMLG --AAGTLAAP BACU009177/1-550 GVRPYSCPLC GKSFSRRSNL HRHEKIHTAG PKALAMLMLG --AAGALAAP 551 600 ENSTTRP00000003810/1-552 PPAPT ENSP00000371627/1-554 PPAPT bmy_02753T0/1-542 PPAPT ENSBTAP00000007323/1-550 PPAPT BACU009177/1-550 PPAPT