KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:40 2014 Check: 00 .. Name: ENSTTRP00000016047/1-460 Len: 546 Check: 7810 Weight: 1.00 Name: ENSP00000340330/1-546 Len: 546 Check: 5131 Weight: 1.00 Name: ENSBTAP00000007328/1-513 Len: 546 Check: 3114 Weight: 1.00 Name: BACU003482/1-546 Len: 546 Check: 4405 Weight: 1.00 Name: bmy_10231T0/1-543 Len: 546 Check: 6849 Weight: 1.00 // 1 50 ENSTTRP00000016047/1-460 ---------- ---------- ---------- ---------- ---------- ENSP00000340330/1-546 MAEVVSPVPG AGRREPGEVG RARGPPVADP GVALSPQGEI IEGCRLPVLR ENSBTAP00000007328/1-513 MAEV------ ---------- ---------- -------GEI IEGCRLPVLR BACU003482/1-546 MAEVVSPVPG AGRREPGEVG RARGPPVADP GAALSPQGEI IEGCRLPGLR bmy_10231T0/1-543 MAEVVSPVPG AGRREPGEVG RARGPPVADP GAALSPQGEI IEGCRLPVLR 51 100 ENSTTRP00000016047/1-460 ---------- ---------- ---------- -----KLDEW VTHERLDVKK ENSP00000340330/1-546 RNQDNEDEWP LAEILSVKDI SGRKLFYVHY IDFNKRLDEW VTHERLDLKK ENSBTAP00000007328/1-513 RNQDNEDEWP LAEILSVKDI SGRKLFYVHY IDFNKRLDEW VTHERLDLKK BACU003482/1-546 RNQDNEDEWP LAEILSVKDI SGRKLFYVHY IDFNKRLDEW VTHERLDLKK bmy_10231T0/1-543 RNQDNEDEWP LAEILSVKDI SGRKLFYVHY IDFNKRLDEW VTHERLDLKK 101 150 ENSTTRP00000016047/1-460 IQFPKKESKT PTKNGLPESR PGSPEREVPA SAQASGKTLP IPVQITLRFN ENSP00000340330/1-546 IQFPKKEAKT PTKNGLPGSR PGSPEREVPA SAQASGKTLP IPVQITLRFN ENSBTAP00000007328/1-513 IQFPKKEAKT PTKNGLPGSR PGSPEREVPA SAQASGKTLP IPVQITLRFN BACU003482/1-546 IQFPKKEAKT PTKNGLPGSR PGSPEREVPA SAQASGKTLP IPVQITLRFN bmy_10231T0/1-543 IQFPKKEAKT PTKNGLPGSR PGSPEREVPA SAQASGKTLP IPVQITLRFN 151 200 ENSTTRP00000016047/1-460 LPKEREAIPG GEPDQPLSSS SCLQPNHRST KRKVEVVSPA TPVPSETAPA ENSP00000340330/1-546 LPKEREAIPG GEPDQPLSSS SCLQPNHRST KRKVEVVSPA TPVPSETAPA ENSBTAP00000007328/1-513 LPKEREAIPG GEPDQPLSSS SCLQPNHRST KRKVEVVSPA TPVPSETAPA BACU003482/1-546 LPKEREAIPG GEPDQPLSSS SCLQPNHRST KRKVEVVSPA TPVPSETAPA bmy_10231T0/1-543 LPKEREAIPG GEPDQPLSSS SCLQPNHRST KRKVEVVSPA TPVPSETAPA 201 250 ENSTTRP00000016047/1-460 SVFPQNGSAR RAVAAQPGRK RKSNCLGTDE DSQDSSDGIP SAPRMTGSLV ENSP00000340330/1-546 SVFPQNGAAR RAVAAQPGRK RKSNCLGTDE DSQDSSDGIP SAPRMTGSLV ENSBTAP00000007328/1-513 SVFPQNGSAR RAVAAQPGRK RKSNCLGTDE DSQDSSDGIP SAPRMTGSLV BACU003482/1-546 SVFPQNGSAR RAVAAQPGRK RKSNCLGTDE DSQDSSDGIP SAPRMTGSLV bmy_10231T0/1-543 SVFPQNGSAR RAVAAQPGRK RKSNCLGTDE ---DSSDGIP SAPRMTGSLV 251 300 ENSTTRP00000016047/1-460 SDRSHDDIVT RMKNIECIEL SRHRLKP-YF SPYPQELTTL PVLYLCEFCL ENSP00000340330/1-546 SDRSHDDIVT RMKNIECIEL GRHRLKPWYF SPYPQELTTL PVLYLCEFCL ENSBTAP00000007328/1-513 SDRSHDDIVT RMKNIECIEL GRHRLKPWYF SPYPQELTAL PVLYLCEFCL BACU003482/1-546 SDRSHDDIVT RMKNIECIEL GRHRLKPWYF SPYPQELTTL PVLYLCEFCL bmy_10231T0/1-543 SDRSHDDIVT RMKNIECIEL GRHRLKPWYF SPYPQELTTL PVLYLCEFCL 301 350 ENSTTRP00000016047/1-460 KYGRSLKCLQ RHLTKCDLRH PPGNEIYRKG TISFFEIDGR KNKSYSQNLC ENSP00000340330/1-546 KYGRSLKCLQ RHLTKCDLRH PPGNEIYRKG TISFFEIDGR KNKSYSQNLC ENSBTAP00000007328/1-513 KYGRSLKCLQ RHLTKCDLRH PPGNEIYRKG TISFFEIDGR KNKSYSQNLC BACU003482/1-546 KYGRSLKCLQ RHLTKCDLRH PPGNEIYRKG TISFFEIDGR KNKSYSQNLC bmy_10231T0/1-543 KYGRSLKCLQ RHLTKCDLRH PPGNEIYRKG TISFFEIDGR KNKSYSQNLC 351 400 ENSTTRP00000016047/1-460 LLAKCFLDHK TLYYDTDPFL FYVMTEYDCK GFHIVGYFSK EKESTEDYNV ENSP00000340330/1-546 LLAKCFLDHK TLYYDTDPFL FYVMTEYDCK GFHIVGYFSK EKESTEDYNV ENSBTAP00000007328/1-513 LLAKCFLDHK TLYYDTDPFL FYVMTEYDCK GFHIVGYFSK EKESTEDYNV BACU003482/1-546 LLAKCFLDHK TLYYDTDPFL FYVMTEYDCK GFHIVGYFSK EKESTEDYNV bmy_10231T0/1-543 LLAKCFLDHK TLYYDTDPFL FYVMTEYDCK GFHIVGYFSK EKESTEDYNV 401 450 ENSTTRP00000016047/1-460 ACILTLPPYQ RRGYGKLLIE FSYELSKVEG KTGTPEKPLS DLGLLSYRSY ENSP00000340330/1-546 ACILTLPPYQ RRGYGKLLIE FSYELSKVEG KTGTPEKPLS DLGLLSYRSY ENSBTAP00000007328/1-513 ACILTLPPYQ RRGYGKLLIE FSYELSKVEG KTGTPEKPLS DLGLLSYRSY BACU003482/1-546 ACILTLPPYQ RRGYGKLLIE FSYELSKVEG KTGTPEKPLS DLGLLSYRSY bmy_10231T0/1-543 ACILTLPPYQ RRGYGKLLIE FSYELSKVEG KTGTPEKPLS DLGLLSYRSY 451 500 ENSTTRP00000016047/1-460 WSQTILEILM GLKSESGERP QITINEISEI TSIKKEDVIS TLQYLNLINY ENSP00000340330/1-546 WSQTILEILM GLKSESGERP QITINEISEI TSIKKEDVIS TLQYLNLINY ENSBTAP00000007328/1-513 WSQTILEILM GLKSESGERP QITINEISEI TSIKKEDVIS TLQYLNLINY BACU003482/1-546 WSQTILEILM GLKSESGERP QITINEISEI TSIKKEDVIS TLQYLNLINY bmy_10231T0/1-543 WSQTILEILM GLKSESGERP QITINEISEI TSIKKEDVIS TLQYLNLINY 501 550 ENSTTRP00000016047/1-460 YKGQYILTLS EDIVDGHERA MLKRLLRIDS KCLHFTPKDW SKRGKW ENSP00000340330/1-546 YKGQYILTLS EDIVDGHERA MLKRLLRIDS KCLHFTPKDW SKRGKW ENSBTAP00000007328/1-513 YKGQYILTLS EDIVDGHERA MLKRLLRIDS KCLHFTPKDW SKRGKW BACU003482/1-546 YKGQYILTLS EDIVDGHERA MLKRLLRIDS KCLHFTPKDW SKRGKW bmy_10231T0/1-543 YKGQYILTLS EDIVDGHERA MLKRLLRIDS KCLHFTPKDW SKRGKW