KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:31:45 2014 Check: 00 .. Name: ENSTTRP00000007219/1-423 Len: 437 Check: 1944 Weight: 1.00 Name: ENSP00000379895/1-423 Len: 437 Check: 8917 Weight: 1.00 Name: ENSBTAP00000007338/1-423 Len: 437 Check: 9740 Weight: 1.00 Name: bmy_17275T0/1-414 Len: 437 Check: 9626 Weight: 1.00 Name: BACU002854/1-328 Len: 437 Check: 70 Weight: 1.00 // 1 50 ENSTTRP00000007219/1-423 MLRVRCLRGG SRGAEAVHYI GSRLGRTVTG WVQRTFQSTQ AATASSRNSC ENSP00000379895/1-423 MLRVRCLRGG SRGAEAVHYI GSRLGRTLTG WVQRTFQSTQ AATASSRNSC ENSBTAP00000007338/1-423 MLRVRCLRGG SRGAEALHYI GSRLGRTVTG WVQRTFQSTQ AATASSRNSC bmy_17275T0/1-414 ---------- ---------- ---LGRTVTG WVQRTFQSTQ AATASSRNSC BACU002854/1-328 ---------- ---------- ---------- ---------- ---------M 51 100 ENSTTRP00000007219/1-423 AADDKATDPL PKDCPVSSYN EWDPLEEVIV GRAENACVPP FTVEVKANTY ENSP00000379895/1-423 AADDKATEPL PKDCPVSSYN EWDPLEEVIV GRAENACVPP FTIEVKANTY ENSBTAP00000007338/1-423 AADDKATDPL PKDCPVSSFN EWDPLEEVIV GRAENACVPP FTVEVKANTY bmy_17275T0/1-414 AADDKATDPL PKDCPVSSYN EWDPLEEVIV GRAENACVPP FTVEVKANTY BACU002854/1-328 KADDKATDPL PKDCPVSSYN EWDPLEEVIV GRAENACVPP FTVEVKANTY 101 150 ENSTTRP00000007219/1-423 EKYWTFYQKY GGHHFPKDHL KKAVAEIEEM CNILKMEGVT VRRPDTIDWS ENSP00000379895/1-423 EKYWPFYQKQ GGHYFPKDHL KKAVAEIEEM CNILKTEGVT VRRPDPIDWS ENSBTAP00000007338/1-423 DKHWPFYQKY GGSYFPKDHL QKAVAEIEEM CNILKMEGVT VRRPDPIDWS bmy_17275T0/1-414 EKYWTFYQKY GGHHFPKDHL KKAVAEIEEM CNILKMEGVT VRRPDTIDWS BACU002854/1-328 EKYWTFYQKY GGHHFPKDHL KKAVAEIEEM CNILKMEGVT VRRPDTIDWS 151 200 ENSTTRP00000007219/1-423 LKYKTPDFES ---------- ----TXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000379895/1-423 LKYKTPDFES ---------- ----TGLYSA MPRDILIVVG NEIIEAPMAW ENSBTAP00000007338/1-423 LKYKTPDFES ---------- ----TGLYGA MPRDILIVVG NEIIEAPMAW bmy_17275T0/1-414 LKYKTPDFES TVSITEVALE PSGLTGLYGA MPRDILIVVG NEIIEAPMAW BACU002854/1-328 LKYKTPDFES ---------- ----TGLYGA MPRDILIVVG NEIIEAPMAW 201 250 ENSTTRP00000007219/1-423 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXD YPIHSVEDRH ENSP00000379895/1-423 RSRFFEYRAY RSIIKDYFHR GAKWTTAPKP TMADELYNQD YPIHSVEDRH ENSBTAP00000007338/1-423 RARFFEYRAY RTIIKDYFRR GAKWTTAPKP TMADELYDQD YPIHSVEDRH bmy_17275T0/1-414 RARFFEYRAY RAIIKDYFRR GAKWTTAPKP TMADELYDQD YPIHSVEDRH BACU002854/1-328 RARFFEYRAY RAIIKDYFRR GAKWTTAPKP TMADELYD-- ---------- 251 300 ENSTTRP00000007219/1-423 KLAAQGKFVT TEFEPCFDAA DFIRAGRDIF AQRSQVTNYM GIEWMRKHLA ENSP00000379895/1-423 KLAAQGKFVT TEFEPCFDAA DFIRAGRDIF AQRSQVTNYL GIEWMRRHLA ENSBTAP00000007338/1-423 KLAAQGKFVT TEFEPCFDAA DFIRAGRDIF VQRSQVTNYM GIEWMRKHLA bmy_17275T0/1-414 KLAAQGKFVT TEFEPCFDAA DFIRAGRDIF AQRSQVTNYM GIEWMRKHLA BACU002854/1-328 ---------- ---------- ---------- ----QVTNYM GIEWMRKHLA 301 350 ENSTTRP00000007219/1-423 PDYRVHIISF KDPNPMHIDA TFNIIGPGLV LSNPDRPCHQ IDLFKKAGWT ENSP00000379895/1-423 PDYRVHIISF KDPNPMHIDA TFNIIGPGIV LSNPDRPCHQ IDLFKKAGWT ENSBTAP00000007338/1-423 PDYRVHIVSF KDPNPMHIDA TFNIIGPGLV LSNPDRPCHQ IDLFKKAGWT bmy_17275T0/1-414 PDYRVHIISF KDPNPMHIDA TFNIIGPGLV LSNPDRPCHQ IDLFKKAGWT BACU002854/1-328 PDYRVHIISF KDPNPMHIDA TFNIIGPGLV LSNPDRPCHQ IDLFKKAGWT 351 400 ENSTTRP00000007219/1-423 IVTPPIPVIP DDHPLWMSSK WLSMNVLMLD EKRVMVDANE VPIQKMFEKL ENSP00000379895/1-423 IITPPTPIIP DDHPLWMSSK WLSMNVLMLD EKRVMVDANE VPIQKMFEKL ENSBTAP00000007338/1-423 IVTPPTPIIP DDHPLWMSSK WLSMNVLMLD EKRVMVDANE VPIQKMFEKL bmy_17275T0/1-414 IVTPPIPVIP DDHPLWMSSK WLSMNVLMLD EKRVMVDANE VPIQKMFEKL BACU002854/1-328 IVTPPIPVIP DDHPLWMSSK WLSMNVLMLD EKRVMVDANE VPIQKMFEKL 401 450 ENSTTRP00000007219/1-423 GISTIKVNIR NANSLGGGFH CWTCDVRRRG TLQSYFD ENSP00000379895/1-423 GITTIKVNIR NANSLGGGFH CWTCDVRRRG TLQSYLD ENSBTAP00000007338/1-423 GISTIKVSIR NANSLGGGFH CWTCDVRRRG TLQSYFD bmy_17275T0/1-414 GISTIKVNIR NANSLGGGFH CWTCDVRRRG TLQSYFD BACU002854/1-328 GISTIKVNIR NANSLGGGFH CWTCDVRRRG TLQSYFD