KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:31:57 2014 Check: 00 .. Name: ENSP00000328818/1-380 Len: 381 Check: 9028 Weight: 1.00 Name: ENSBTAP00000007420/1-374 Len: 381 Check: 2364 Weight: 1.00 Name: bmy_17369T0/1-317 Len: 381 Check: 8020 Weight: 1.00 Name: BACU006332/1-172 Len: 381 Check: 1279 Weight: 1.00 // 1 50 ENSP00000328818/1-380 MCPMLLKNGY NGNATPVTTT APWASLGLSA KTCNNVSFEE SRIVLVVVYS ENSBTAP00000007420/1-374 LCP------- AGNTTLETGP ALGALSTGGS PHTCDVPFDE SRVLLVTVYS bmy_17369T0/1-317 ---------- ---------- ---------- ----MVPFND SRVFLVTVYS BACU006332/1-172 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000328818/1-380 AVCTLGVPAN CLTAWLALLQ VLQGNVLAVY LLCLALCELL YTGTLPLWVI ENSBTAP00000007420/1-374 GVCALGLPAN GLTAWLTLLQ ARQGHVLAVY LFCLALCELL YISTLPLWVI bmy_17369T0/1-317 TVCTLGLPAN CLTAWLTLLQ VRRGHVLAVY LFCLALCELL YISTLPLWVV BACU006332/1-172 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000328818/1-380 YIRNQHRWTL GLLACKVTAY IFFCNIYVSI LFLCCISCDR FVAVVYALES ENSBTAP00000007420/1-374 YIQHGHHWPL SPWACKAAAY IFFCNLYLSI LFLCCISCDR FLAVVYALET bmy_17369T0/1-317 YIQNGHRWPL GPRACKVTAY VFFCNLYVSI LFLCCISCDR FLAVVYALET BACU006332/1-172 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000328818/1-380 RGRRRRRTAI LISACIFILV GIVHYPVFQT EDKETCFDML QMDSRIAGYY ENSBTAP00000007420/1-374 RGRRHQKTAI LVSAAVFLLV GLVHSPVFKM EHNGTCFETL PMDRRVAGYY bmy_17369T0/1-317 RGHRHRKTAI LVSVSVFVLV GLVHYPVFQM EEKETCFETL PMDREIAGYY BACU006332/1-172 ---------- ---------- ---------M EEEETCFEKL PMDREIAGYY 201 250 ENSP00000328818/1-380 YARFTVGFAI PLSIIAFTNH RIFRSIKQSM GLSAAQKAKV KHSAIAVVVI ENSBTAP00000007420/1-374 YARFMVGFAV PLFIIAVTNQ RIFRTVQLST SLSTAQKAKV RLLAIAVVAI bmy_17369T0/1-317 YTRFAVGFAV PLSIIAFTNQ RIFRSIKLST SLSAAQKAKV KRLAIAVVTI BACU006332/1-172 YTRFAVGFAV PLSVIAFTNQ RIFRSIKQST SLSAAQKAKV KRLAVAVVTI 251 300 ENSP00000328818/1-380 FLVCFAPYHL VLLVKAAAFS YYRGDRNAMC GLEERLYTAS VVFLCLSTVN ENSBTAP00000007420/1-374 FLVCFAPYHL VLLIKAVAFS YYRGAADLVC TLEIRLYTVS VVFLSLATVN bmy_17369T0/1-317 FLFCFAPYHL VLLGKAIAFS YYKGDTGPLC AFEVNLYTVS VVFLSLATVN BACU006332/1-172 FLFCFAPYHL VLLGKAIAFS YYKGDTGPLC AFEINLCTVS VVFLSLATVN 301 350 ENSP00000328818/1-380 GVADPIIYVL ATDHSRQEVS RIHKGWKEWS MKTDVTRLTH SRDTEELQSP ENSBTAP00000007420/1-374 SVADPIIYVL AAEATRQEVC RMHKGWKKWS TKTDNTKLTC SKDSDEARSP bmy_17369T0/1-317 SVADPIIYVL ATEVSRQEVS RIHGAWKKWS MKTDVAKLTY SKDSEEARSP BACU006332/1-172 SVADPIIYVL ATEVSRQEVS RIHRGWKKWS MKTDVAKLTY SKDSEEARSP 351 400 ENSP00000328818/1-380 VALADHYTFS RPVHPPG-SP CPAKRLIEES C ENSBTAP00000007420/1-374 MSLTNSYGFP EPVHPPGPSP GSPEGLAEGS C bmy_17369T0/1-317 T--------- ---------- ---------- - BACU006332/1-172 T--------- ---------- ---------- -