KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:31:57 2014 Check: 00 ..
Name: ENSTTRP00000007059/1-409 Len: 411 Check: 8661 Weight: 1.00
Name: ENSP00000281321/1-409 Len: 411 Check: 8412 Weight: 1.00
Name: bmy_13130T0/1-323 Len: 411 Check: 3142 Weight: 1.00
Name: BACU013558/1-408 Len: 411 Check: 6599 Weight: 1.00
Name: ENSBTAP00000007421/1-408 Len: 411 Check: 5607 Weight: 1.00
//
1 50
ENSTTRP00000007059/1-409 MMMMSLNSKQ AFSMPHGGSL HVEPKYSALH SASPGSSAPA APSASSPSSS
ENSP00000281321/1-409 MMMMSLNSKQ AFSMPHGGSL HVEPKYSALH STSPGSSAPI APSASSPSSS
bmy_13130T0/1-323 ---------- ---------- ---------- ---------- ----------
BACU013558/1-408 MMMMSLNSKQ AFSMPHGGSL HVEPKYSALH SASPGSSAPP APSASSPSSS
ENSBTAP00000007421/1-408 MMMMSLNSKQ AFSMPHGGSL HVEPKYSALH SASPGSSAPA APSASSPSSS
51 100
ENSTTRP00000007059/1-409 SNAGGGGGSG GGGGGRSSSS SSSGSSGGS- GGGSEAMRRA CLPTPPSNIF
ENSP00000281321/1-409 SNAGGGGGGG GGGGGGGGRS SSSSSSGSSG GGGSEAMRRA CLPTPPSNIF
bmy_13130T0/1-323 ---------- ---------- ---------- ------MRRA CLPTPPSNIF
BACU013558/1-408 SNAGGGGGSG GGGGGRSSSS SSSGSSGGS- GGGSEAMRRA CLPTPPSNIF
ENSBTAP00000007421/1-408 SNAGGGGGSG GGGGGRSSSS SSSGSSGGS- GGGSEAMRRA CLPTPPSNIF
101 150
ENSTTRP00000007059/1-409 GGLDESLLAR AEALAAVDIV SQSKSHHHHP PHHSPFKPDA TYHTMNTIPC
ENSP00000281321/1-409 GGLDESLLAR AEALAAVDIV SQSKSHHHHP PHHSPFKPDA TYHTMNTIPC
bmy_13130T0/1-323 GGLDESLLAR AEALAAVDIV SQSKSHHHHP PHHSPFKPDA TYHTMNTIPC
BACU013558/1-408 GGLDESLLAR AEALAAVDIV SQSKSHHHHP PHHSPFKPDA TYHTMNTIPC
ENSBTAP00000007421/1-408 GGLDESLLAR AEALAAVDIV SQSKSHHHHP PHHSPFKPDA TYHTMNTIPC
151 200
ENSTTRP00000007059/1-409 TSAASSSSVP ISHPSALAGT HHHHHHHHHH HHQPHQALEG ELLEHLSPGL
ENSP00000281321/1-409 TSAASSSSVP ISHPSALAGT HHHHHHHHHH HHQPHQALEG ELLEHLSPGL
bmy_13130T0/1-323 TSAASSSSVP ISHPSALAGT HHHHHHHHHH HHQPHQALEG ELLEHLSPGL
BACU013558/1-408 TSAASSSSVP ISHPSALAGT HHHHHHHHHH HHQPHQALEG ELLEHLSPGL
ENSBTAP00000007421/1-408 TSAASSSSVP ISHPSALAGT HHHHHHHHHH HHQPHQALEG ELLEHLSPGL
201 250
ENSTTRP00000007059/1-409 ALGAMAGPDG AVVSTPAHAP PMATMNPMHQ AALSMAHAHG LPSHMGCMSD
ENSP00000281321/1-409 ALGAMAGPDG AVVSTPAHAP HMATMNPMHQ AALSMAHAHG LPSHMGCMSD
bmy_13130T0/1-323 ALGAMAGPDG AVVSTPAHAP PMATMNPMHQ AALSMAHAHG LPSHMSCMSD
BACU013558/1-408 ALGAMAGPDG AVVSTPAHAP PMATMNPMHQ AALSMAHAHG LPSHMGCMSD
ENSBTAP00000007421/1-408 ALGAMAGPDG AVVSTPAHAP HMATMNPMHQ AALSMAHAHG LPSHMGCMSD
251 300
ENSTTRP00000007059/1-409 VDADPRDLEA FAERFKQRRI KLGVTHADVG SALANLKIPG VGSLSQSTIC
ENSP00000281321/1-409 VDADPRDLEA FAERFKQRRI KLGVTQADVG SALANLKIPG VGSLSQSTIC
bmy_13130T0/1-323 VDADPRDLEA FAERFKQRRI KLGVTQADVG SALANLKIPG VGSLSQSTIC
BACU013558/1-408 VDADPRDLEA FAERFKQRRI KLGVTQADVG SALANLKIPG VGSLSQSTIC
ENSBTAP00000007421/1-408 VDADPRDLEA FAERFKQRRI KLGVTQADVG SALANLKIPG VGSLSQSTIC
301 350
ENSTTRP00000007059/1-409 R-ESLTLSHN NMIALKPILQ AWLEEAEKSX XXXXXXXXXX XXXXXXXXXX
ENSP00000281321/1-409 RFESLTLSHN NMIALKPILQ AWLEEAEKS- -HREKLTKPE LFNGAEKKRK
bmy_13130T0/1-323 RFESLTLSHN NMIALKPILQ AWLEEAEKS- -HREKLTKPE LFNGAEKKRK
BACU013558/1-408 RFESLTLSHN NMIALKPILQ AWLEEAEKS- -HREKLTKPE LFNGAEKKRK
ENSBTAP00000007421/1-408 RFESLTLSHN NMIALKPILQ AWLEEAEKS- -HREKLTKPE LFNGAEKKRK
351 400
ENSTTRP00000007059/1-409 XXXXXXXXXX XXSAYFAIQP RPSSEKIAAI AEKLDLKKNV VRVWFCNQRQ
ENSP00000281321/1-409 RTSIAAPEKR SLEAYFAIQP RPSSEKIAAI AEKLDLKKNV VRVWFCNQRQ
bmy_13130T0/1-323 RTSIAAPEKR SLEAYFAIQP RPSSEKIAAI AEKLDLKKNV VRVWFCNQRQ
BACU013558/1-408 RTSIAAPEKR SLEAYFAIQP RPSSEKIAAI AEKLDLKKNV VRVWFCNQRQ
ENSBTAP00000007421/1-408 RTSIAAPEKR SLEAYFAIQP RPSSEKIAAI AEKLDLKKNV VRVWFCNQRQ
401 450
ENSTTRP00000007059/1-409 KQKRMKYSAG I
ENSP00000281321/1-409 KQKRMKYSAG I
bmy_13130T0/1-323 KQKRMKYSAG I
BACU013558/1-408 KQKRMKYSAG I
ENSBTAP00000007421/1-408 KQKRMKYSAG I