KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:05 2014 Check: 00 .. Name: BACU016569/1-901 Len: 919 Check: 8581 Weight: 1.00 Name: ENSP00000310129/1-908 Len: 919 Check: 5834 Weight: 1.00 Name: bmy_10420T0/1-484 Len: 919 Check: 7514 Weight: 1.00 Name: ENSTTRP00000010665/1-908 Len: 919 Check: 6076 Weight: 1.00 Name: ENSBTAP00000007436/1-908 Len: 919 Check: 6345 Weight: 1.00 // 1 50 BACU016569/1-901 MARGKLGIGV FV-------- ---------- RFRRGEWEED VFEILCLDEL ENSP00000310129/1-908 MEEGGRDKAP VQPQQSPAAA PGGTDEKPSG KERRDAGDKD KEQEL----- bmy_10420T0/1-484 MEEGGREKAP LQPQQPPATS PGGGDEKPSG KERRDAGDKD KEQEL----- ENSTTRP00000010665/1-908 MEEGGREKAP LQPQQPPATS PGGGDEKPSG KERRDAGDKD KEQEL----- ENSBTAP00000007436/1-908 MEEGGRDKAP LQPQQPPATS PGSGDEKPSG KERRDAGDKD KEQEL----- 51 100 BACU016569/1-901 LPPTLQSEED KQLQDELEML VERLGEKDTS LYRPALEELR RQIRSSTTSM ENSP00000310129/1-908 ------SEED KQLQDELEML VERLGEKDTS LYRPALEELR RQIRSSTTSM bmy_10420T0/1-484 ------SEED KQLQDELEML VERLGEKDTS LYRPALEELR RQIRSSTTSM ENSTTRP00000010665/1-908 ------SEED KQLQDELEML VERLGEKDTS LYRPALEELR RQIRSSTTSM ENSBTAP00000007436/1-908 ------SEED KQLQDELEML VERLGEKDTS LYRPALEELR RQIRSSTTSM 101 150 BACU016569/1-901 TSVPKPLKFL RPHYGKLKEI YENMAPGENK RFAADIISVL AMTMSGEREC ENSP00000310129/1-908 TSVPKPLKFL RPHYGKLKEI YENMAPGENK RFAADIISVL AMTMSGEREC bmy_10420T0/1-484 TSVPKPLKFL RPHYGKLKEI YENMAPGENK RFAADIISVL AMTMSGDREC ENSTTRP00000010665/1-908 TSVPKPLKFL RPHYGKLKEI YENMAPGENK RFAADIISVL AMTMSGEREC ENSBTAP00000007436/1-908 TSVPKPLKFL RPHYGKLKEI YENMAPGENK RFAADIISVL AMTMSGEREC 151 200 BACU016569/1-901 LKYRLVGSQE ELASWGHEYV RHLAGEVAKE WQELDDAEKT QREPLLTLVK ENSP00000310129/1-908 LKYRLVGSQE ELASWGHEYV RHLAGEVAKE WQELDDAEKV QREPLLTLVK bmy_10420T0/1-484 LKYRLVGSQE ELASWGHEYV RHLAGEVAKE WQELDDAEKT QREPLLTLVK ENSTTRP00000010665/1-908 LKYRLVGSQE ELASWGHEYV RHLAGEVAKE WQELDDAEKT QREPLLTLVK ENSBTAP00000007436/1-908 LKYRLVGSQE ELASWGHEYV RHLAGEVAKE WQELDDAEKT QREPLLTLVK 201 250 BACU016569/1-901 EIVPYNMAHN AEHEACDLLM EIEQVDMLEK DIDENAYAKV CLYLTSCVNY ENSP00000310129/1-908 EIVPYNMAHN AEHEACDLLM EIEQVDMLEK DIDENAYAKV CLYLTSCVNY bmy_10420T0/1-484 EIVPYNMAHN AEHEACDLLM EIEQVDMLEK DIDENAYAKV CLYLTSCVNY ENSTTRP00000010665/1-908 EIVPYNMAHN AEHEACDLLM EIEQVDMLEK DIDENAYAKV CLYLTSCVNY ENSBTAP00000007436/1-908 EIVPYNMAHN AEHEACDLLM EIEQVDMLEK DIDENAYAKV CLYLTSCVNY 251 300 BACU016569/1-901 VPEPENSALL RCALGVFRKF SRFPEALRLA LMLNDMELVE DIFTSCKDVV ENSP00000310129/1-908 VPEPENSALL RCALGVFRKF SRFPEALRLA LMLNDMELVE DIFTSCKDVV bmy_10420T0/1-484 VPEPENSALL RCALGVFRKF SRFPEALRLA LMLNDMELVE DIFTSCKDVV ENSTTRP00000010665/1-908 VPEPENSALL RCALGVFRKF SRFPEALRLA LMLNDMELVE DIFTSCKDVV ENSBTAP00000007436/1-908 VPEPENSALL RCALGVFRKF SRFPEALRLA LMLNDMELVE DIFTSCKDVV 301 350 BACU016569/1-901 VQKQMAFMLG RHGVFLELSE DVEEYEDLTE IMSNVQLNSN FLALARELDI ENSP00000310129/1-908 VQKQMAFMLG RHGVFLELSE DVEEYEDLTE IMSNVQLNSN FLALARELDI bmy_10420T0/1-484 VQKQMAFMLG RHGVFLELSE DVEEYEDLTE IMSNVQLNSN FLALARELDI ENSTTRP00000010665/1-908 VQKQMAFMLG RHGVFLELSE DVEEYEDLTE IMSNVQLNSN FLALARELDI ENSBTAP00000007436/1-908 VQKQMAFMLG RHGVFLELSE DVEEYEDLTE IMSNVQLNSN FLALARELDI 351 400 BACU016569/1-901 MEPKVPDDIY KTHLENNRFG GSGSQVDSAR MNLASSFVNG FVNAAFGQDK ENSP00000310129/1-908 MEPKVPDDIY KTHLENNRFG GSGSQVDSAR MNLASSFVNG FVNAAFGQDK bmy_10420T0/1-484 MEPKVPDDIY KTHLENNRFG GSGSQVDSAR MNLASSFVNG FVNAAFGQDK ENSTTRP00000010665/1-908 MEPKVPDDIY KTHLENNRFG GSGSQVDSAR MNLASSFVNG FVNAAFGQDK ENSBTAP00000007436/1-908 MEPKVPDDIY KTHLENNRFG GSGSQVDSAR MNLASSFVNG FVNAAFGQDK 401 450 BACU016569/1-901 LLTDDGNKWL YKNKDHGMLS AAASLGMILL WDVDGGLTQI DKYLYSSEDY ENSP00000310129/1-908 LLTDDGNKWL YKNKDHGMLS AAASLGMILL WDVDGGLTQI DKYLYSSEDY bmy_10420T0/1-484 LLTDDGNKWL YKNKDHGMLS AAASLGMILL WDVDGGLTQI DKYLYSSEDY ENSTTRP00000010665/1-908 LLTDDGNKWL YKNKDHGMLS AAASLGMILL WDVDGGLTQI DKYLYSSEDY ENSBTAP00000007436/1-908 LLTDDGNKWL YKNKDHGMLS AAASLGMILL WDVDGGLTQI DKYLYSSEDY 451 500 BACU016569/1-901 IKSGALLACG IVNSGVRNEC DPALALLSDY VLHNSNTMRL GSIFGLGLAY ENSP00000310129/1-908 IKSGALLACG IVNSGVRNEC DPALALLSDY VLHNSNTMRL GSIFGLGLAY bmy_10420T0/1-484 IKSGALLACG IVNSGVRNEC DPALALLSDY VLHNSNTMRL GSIFG----- ENSTTRP00000010665/1-908 IKSGALLACG IVNSGVRNEC DPALALLSDY VLHNSNTMRL GSIFGLGLAY ENSBTAP00000007436/1-908 IKSGALLACG IVNSGVRNEC DPALALLSDY VLHNSNTMRL GSIFGLGLAY 501 550 BACU016569/1-901 AGSNREDVLT LLLPVMGDSK SSMEVAGVTA LACGMIAVGS CNGDVTSTIL ENSP00000310129/1-908 AGSNREDVLT LLLPVMGDSK SSMEVAGVTA LACGMIAVGS CNGDVTSTIL bmy_10420T0/1-484 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010665/1-908 AGSNREDVLT LLLPVMGDSK SSMEVAGVTA LACGMIAVGS CNGDVTSTIL ENSBTAP00000007436/1-908 AGSNREDVLT LLLPVMGDSK SSMEVAGVTA LACGMIAVGS CNGDVTSTIL 551 600 BACU016569/1-901 QTIMEKSETE LKDTYARWLP LGLGLNHLGK GEAIEAILAA LEVVSEPFRS ENSP00000310129/1-908 QTIMEKSETE LKDTYARWLP LGLGLNHLGK GEAIEAILAA LEVVSEPFRS bmy_10420T0/1-484 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010665/1-908 QTIMEKSETE LKDTYARWLP LGLGLNHLGK GEAIEAILAA LEVVSEPFRS ENSBTAP00000007436/1-908 QTIMEKSETE LKDTYARWLP LGLGLNHLGK GEAIEAILAA LEVVSEPFRS 601 650 BACU016569/1-901 FANTLVDVCA YAGSGNVLKV QQLLHICSEH FDSKEKEEDK DKKEKKDKDK ENSP00000310129/1-908 FANTLVDVCA YAGSGNVLKV QQLLHICSEH FDSKEKEEDK DKKEKKDKDK bmy_10420T0/1-484 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010665/1-908 FANTLVDVCA YAGSGNVLKV QQLLHICSEH FDSKEKEEDK DKKEKKDKDK ENSBTAP00000007436/1-908 FANTLVDVCA YAGSGNVLKV QQLLHICSEH FDSKEKEEDK DKKEKKDKDK 651 700 BACU016569/1-901 KEAPADMGAH QGVAVLGIAL IAMGEEIGAE MALRTFGHLL RYGEPTLRRA ENSP00000310129/1-908 KEAPADMGAH QGVAVLGIAL IAMGEEIGAE MALRTFGHLL RYGEPTLRRA bmy_10420T0/1-484 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010665/1-908 KEAPADMGAH QGVAVLGIAL IAMGEEIGAE MALRTFGHLL RYGEPTLRRA ENSBTAP00000007436/1-908 KEAPADMGAH QGVAVLGIAL IAMGEEIGAE MALRTFGHLL RYGEPTLRRA 701 750 BACU016569/1-901 VPLALALISV SNPRLNILDT LSKFSHDADP EVSYNSIFAM GMVGSGTNNA ENSP00000310129/1-908 VPLALALISV SNPRLNILDT LSKFSHDADP EVSYNSIFAM GMVGSGTNNA bmy_10420T0/1-484 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010665/1-908 VPLALALISV SNPRLNILDT LSKFSHDADP EVSYNSIFAM GMVGSGTNNA ENSBTAP00000007436/1-908 VPLALALISV SNPRLNILDT LSKFSHDADP EVSYNSIFAM GMVGSGTNNA 751 800 BACU016569/1-901 RLAAMLRQLA QYHAKDPNNL FMVRLAQGLT HLGKGTLTLC PYHSDRQLMS ENSP00000310129/1-908 RLAAMLRQLA QYHAKDPNNL FMVRLAQGLT HLGKGTLTLC PYHSDRQLMS bmy_10420T0/1-484 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010665/1-908 RLAAMLRQLA QYHAKDPNNL FMVRLAQGLT HLGKGTLTLC PYHSDRQLMS ENSBTAP00000007436/1-908 RLAAMLRQLA QYHAKDPNNL FMVRLAQGLT HLGKGTLTLC PYHSDRQLMS 801 850 BACU016569/1-901 QVAVAGLLTV LVSFLDVRNI ILGKSHYVLY GLVAAMQPRM LVTFDEELRP ENSP00000310129/1-908 QVAVAGLLTV LVSFLDVRNI ILGKSHYVLY GLVAAMQPRM LVTFDEELRP bmy_10420T0/1-484 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010665/1-908 QVAVAGLLTV LVSFLDVRNI ILGKSHYVLY GLVAAMQPRM LVTFDEELRP ENSBTAP00000007436/1-908 QVAVAGLLTV LVSFLDVRNI ILGKSHYVLY GLVAAMQPRM LVTFDEELRP 851 900 BACU016569/1-901 LPVSVRVGQA VDVVGQAGKP KTITGFQTHT TPVLLAHGER AELATEEFLP ENSP00000310129/1-908 LPVSVRVGQA VDVVGQAGKP KTITGFQTHT TPVLLAHGER AELATEEFLP bmy_10420T0/1-484 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010665/1-908 LPVSVRVGQA VDVVGQAGKP KTITGFQTHT TPVLLAHGER AELATEEFLP ENSBTAP00000007436/1-908 LPVSVRVGQA VDVVGQAGKP KTITGFQTHT TPVLLAHGER AELATEEFLP 901 950 BACU016569/1-901 VTPILEGFVI LRKNPNYDL ENSP00000310129/1-908 VTPILEGFVI LRKNPNYDL bmy_10420T0/1-484 ---------- --------- ENSTTRP00000010665/1-908 VTPILEGFVI LRKNPNYDL ENSBTAP00000007436/1-908 VTPILEGFVI LRKNPNYDL