KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:06 2014 Check: 00 .. Name: bmy_08118T0/1-247 Len: 461 Check: 2051 Weight: 1.00 Name: ENSP00000378310/1-460 Len: 461 Check: 4899 Weight: 1.00 Name: BACU004534/1-404 Len: 461 Check: 7859 Weight: 1.00 Name: ENSBTAP00000007448/1-461 Len: 461 Check: 1542 Weight: 1.00 Name: ENSTTRP00000015678/1-461 Len: 461 Check: 8803 Weight: 1.00 // 1 50 bmy_08118T0/1-247 ---------- ---------- ---------- ---------- ---------- ENSP00000378310/1-460 MAPGRAVAGL LLLAAAGLGG VAEGPGLAFS EDVLSVFGAN LSLSAAQLQH BACU004534/1-404 ----MELVNS ILSPSTPAG- ---------- ---------- ---------- ENSBTAP00000007448/1-461 MAPGRAVAGL LLLAAAGLGG EAEVPWLAFS EDVLSVFGAN RSLSAAQLGR ENSTTRP00000015678/1-461 MAPGRAVAGL LLLAAAGLGG EAAGPALAFS EDVLSVFGAN LSLSAAQLGR 51 100 bmy_08118T0/1-247 ---------- ---------- ---------- ---------- ---------- ENSP00000378310/1-460 LLEQMGAASR VGVPEPGQLH FNQCLTAEEI FSLHGFSNAT QITSSKFSVI BACU004534/1-404 ---------- ---------- --TCLSAEEI FSLHGFSNAT QITSSDFSVI ENSBTAP00000007448/1-461 LLERLGAAPV EGAPEPGQLH FNQCLSAAEI FSLHGFSNVT QITSSNFSVI ENSTTRP00000015678/1-461 LLEQLGAAPV EGDPEPGQLH FNQCLSAEEI FSLHGFSNAT QITSSDFSVI 101 150 bmy_08118T0/1-247 -MHKLKEFVY RLCTKYQVVK T-------WS YNL------- ---------- ENSP00000378310/1-460 CPAVLQQLNF HPCEDRPKHK TRPSHSEVWG YGFLSVTIIN LASLLGLILT BACU004534/1-404 CPAVLQQLNF HPCEDRPKQK TKPSHSEVWG YGFLSVTVIN LASLLGLVLT ENSBTAP00000007448/1-461 CPAVLQQLNF HPCKERLKHK TKPSLSEVWG YGFLSVTIIN LASLLGLVLT ENSTTRP00000015678/1-461 CPAVLQQLNF HPCDDRPKHK TKPSLSEVWG YGFLSVTVIN LASLLGLILT 151 200 bmy_08118T0/1-247 -------SPK SSQFLENASV G------ICH LILYNFGFLS TMKDF----- ENSP00000378310/1-460 PLIKKSYFPK ILTFFVGLAI GTLFSNAIFQ LIPEAFGFDP KVDSYVEKAV BACU004534/1-404 PLIKKSYFPK ILTYFVGLAI GTLFSNAIFQ LIPEAFGFNP KIDNYVEKAV ENSBTAP00000007448/1-461 PLIKKSYFPK ILTYFVGLAI GTLFSNAIFQ LIPEAFGFNP KVNNYVEKAV ENSTTRP00000015678/1-461 PLIKKSYFPK ILTYFVGLAI GTLFSNAIFQ LIPEAFGFNP KIDNYVEKAV 201 250 bmy_08118T0/1-247 ---------- ---------- ---------- ---------- ---------- ENSP00000378310/1-460 AVFGGFYLLF FFERMLKMLL KTYGQNGHTH FGNDNFG-PQ EKTHQPKALP BACU004534/1-404 AVFGGFYILF FFERTLKILL KTYGQDGHTH FGNDDFGSSQ EKTHQPKTLP ENSBTAP00000007448/1-461 AVFGGFYILF FFERTLKMLL KTYGQNDHTH FGNNDFGPPQ EKTHQPKALP ENSTTRP00000015678/1-461 AVFGGFYILF FFERTLKMLL KTYGQDGHTH FGNDDFGSSR EKTHQPKTLP 251 300 bmy_08118T0/1-247 ---------- -----SGGNI ------CLSL HDGNKESSSC TCLKGPKLSE ENSP00000378310/1-460 AINGVTCYAN PAVTEANGHI HFDNVSVVSL QDGKKEPSSC TCLKGPKLSE BACU004534/1-404 AINGVTCYAN PAVTEPNGHI HFDNVSVVSL QDANKESSSC TCLKGPKLSE ENSBTAP00000007448/1-461 AINGVTCYAN PAVTEPNGHI PFDNVSVVSL QDGKKESSSC TCLKGPKLSE ENSTTRP00000015678/1-461 AINGVTCYAN PAVTEPNGHI HFDNVSVVSL QDGKKESTSC TCMKGPKLSE 301 350 bmy_08118T0/1-247 IGTIAWMITL SDALHNFIDG LAIGASCTLS LLQGLSTSIA ILCEEFPHEL ENSP00000378310/1-460 IGTIAWMITL CDALHNFIDG LAIGASCTLS LLQGLSTSIA ILCEEFPHEL BACU004534/1-404 IGTIAWMITL SDALHNFIDG LAIGASCTLS LLQGLSTSIA ILCEEFPHEL ENSBTAP00000007448/1-461 IGTIAWMITL SDALHNFIDG LAIGASCTLS LLQGLSTSIA ILCEEFPHEL ENSTTRP00000015678/1-461 IGTIAWMITL SDALHNFIDG LAIGASCTLS LLQGLSTSIA ILCEEFPHEL 351 400 bmy_08118T0/1-247 GDFVILLNAG MSTRQALLFN FLSACSCYVG LAFGILVGNN FAPNIIFALA ENSP00000378310/1-460 GDFVILLNAG MSTRQALLFN FLSACSCYVG LAFGILVGNN FAPNIIFALA BACU004534/1-404 GDFVILLNAG MSTRQALLFN FLSACSCYVG LAFGILVGNN FAPNIIFALA ENSBTAP00000007448/1-461 GDFVILLNAG MSTRQALLFN FLSACSCYVG LAFGILVGNN FAPNIIFALA ENSTTRP00000015678/1-461 GDFVILLNAG MSTRQALLFN FLSACSCYVG LAFGILVGNN FAPNIIFALA 401 450 bmy_08118T0/1-247 GGMFLYISLA DMFPEMNDML REKVTGRKTD FTFFMIQNAG MLTGFTAILL ENSP00000378310/1-460 GGMFLYISLA DMFPEMNDML REKVTGRKTD FTFFMIQNAG MLTGFTAILL BACU004534/1-404 GGMFLYISLA DMFPEMNDML REKVTGRKTD FTFFMIQNAG MLTGFTAILL ENSBTAP00000007448/1-461 GGMFLYISLA DMFPEMNDML REKVTGRKTD FTFFMIQNAG MLTGFTAILL ENSTTRP00000015678/1-461 GGMFLYISLA DMFPEMNDML REKVTGRQTD FTFFVIQNAG VLTGFTAILL 451 500 bmy_08118T0/1-247 ITMYAGEIEL E ENSP00000378310/1-460 ITLYAGEIEL E BACU004534/1-404 ITMYAGEIEL E ENSBTAP00000007448/1-461 ITLYAGEIEL E ENSTTRP00000015678/1-461 ITLYAGEIEL E