KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:06 2014 Check: 00 .. Name: BACU005683/1-1035 Len: 1101 Check: 1545 Weight: 1.00 Name: ENSP00000270747/1-802 Len: 1101 Check: 7248 Weight: 1.00 Name: ENSBTAP00000007450/1-807 Len: 1101 Check: 4848 Weight: 1.00 Name: bmy_08224T0/1-760 Len: 1101 Check: 3842 Weight: 1.00 Name: ENSTTRP00000016477/1-805 Len: 1101 Check: 7891 Weight: 1.00 // 1 50 BACU005683/1-1035 MFSLAYAPSL TDGLHGTACQ SVHPVHSLPV GHSELVSEAP ACCQPPAKPG ENSP00000270747/1-802 -MDCGPPATL QPHLTGPPGT AHHPV---AV CQQESLSFAE LPALKPPSPV ENSBTAP00000007450/1-807 -MDCGPPTAL QPHLAGPPGT AHRPV---AM CQQESLSFAE LPVLQPPGPM bmy_08224T0/1-760 -MDCGPPPTL QSHLAGSPST AHRPV---AV CQQESLSFAE LPTLQPPSPV ENSTTRP00000016477/1-805 -MDCGPPPAL QSHLAGPPGT AHRPV---AV CQQESLSFAE LPTLQPPSPV 51 100 BACU005683/1-1035 LVDNKENPRQ VACSQDEEGD AGARSAKAAG QASRALGRRW RRGQGPEDDR ENSP00000270747/1-802 CLD------- ---------- ----LFPVAP EELRAPGSRW SLG------- ENSBTAP00000007450/1-807 CLD------- ---------- ----LFPVAP EELQAPGSRW SLG------- bmy_08224T0/1-760 CLD------- ---------- ----LFPVAP EELQAPGSRW SLG------- ENSTTRP00000016477/1-805 CLD------- ---------- ----LFPVAP EELQAPGSRW SLG------- 101 150 BACU005683/1-1035 LCASRGSICV PDSGGNFFRD WKTEIEFAAL APQMAQNPVT GLKEPYFPPC ENSP00000270747/1-802 ---------- ---------- ---------- ----TPAPLQ GL---LWPLS ENSBTAP00000007450/1-807 ---------- ---------- ---------- ----TPAPLQ GL---LWPPA bmy_08224T0/1-760 ---------- ---------- ---------- ----TPAPLQ GL---LWPPS ENSTTRP00000016477/1-805 ---------- ---------- ---------- ----TPAPLQ GL---LWPPS 151 200 BACU005683/1-1035 TRLPCLLTSS AAILIMLCVV MIFLVSVIIY CGIISIAMFH TANSVLMTQA ENSP00000270747/1-802 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007450/1-807 ---------- ---------- ---------- ---------- ---------- bmy_08224T0/1-760 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016477/1-805 ---------- ---------- ---------- ---------- ---------- 201 250 BACU005683/1-1035 SNIANISSTV LYLVLILLLG QVYTSLAEQL TSKPGGCLLK LAQQLFIITV ENSP00000270747/1-802 ---------- ---------- ---------- ---PGGS--- ---------- ENSBTAP00000007450/1-807 ---------- ---------- ---------- ---PGGA--- ---------- bmy_08224T0/1-760 ---------- ---------- ---------- ---PGGP--- ---------- ENSTTRP00000016477/1-805 ---------- ---------- ---------- ---PGGP--- ---------- 251 300 BACU005683/1-1035 SKQLVSNVQE FIVLKLKTWR QKRHLAGLQD TQIRQEQRRW EQDYELIEFK ENSP00000270747/1-802 ---------- ---------- ---------D TEI-TSG--- ---------- ENSBTAP00000007450/1-807 ---------- ---------- ---------D PELSTSG--- ---------- bmy_08224T0/1-760 ---------- ---------- ---------D TEISTSG--- ---------- ENSTTRP00000016477/1-805 ---------- ---------- ---------D TEISTGG--- ---------- 301 350 BACU005683/1-1035 GQFDEFLEMG PLQAFLIAFT SDFLPRLLYQ DKGFRDAQRN LTLFYWKLLA ENSP00000270747/1-802 ---------- ---------- ---------- --GMRPSRAG ---------- ENSBTAP00000007450/1-807 ---------- ---------- ---------- --GMRPSRAG ---------- bmy_08224T0/1-760 ---------- ---------- ---------- --GMRPSRAG ---------- ENSTTRP00000016477/1-805 ---------- ---------- ---------- --GMRPSRAG ---------- 351 400 BACU005683/1-1035 VRLGFIIAFE HVVFFLGLIA WLVPDVPAAL ATKIKRERYL AKQALEDNRE ENSP00000270747/1-802 ---------- ---------S W--PHCPGA- ---------- -------QPP ENSBTAP00000007450/1-807 ---------- ---------S W--PHCPGA- ---------- -------QPP bmy_08224T0/1-760 ---------- ---------S W--PHCPSA- ---------- -------QSP ENSTTRP00000016477/1-805 ---------- ---------S W--PHCPSA- ---------- -------QSP 401 450 BACU005683/1-1035 TLLSPAGQRE GFPCRSSRTT SAVGLGWRGR KMRVYQQEEA LGSPEAHAVF ENSP00000270747/1-802 ALEGPWSPRH TQPQRRASHG SEKKSAW--R KMRVYQREEV PGCPEAHAVF ENSBTAP00000007450/1-807 ALEGPWSPQH PQPQRRASHG SEKKSAW--R KMRVYQREEA LGGPEAHAVF bmy_08224T0/1-760 ALEGPWSPQH LQPQRRASHG SEKKSAW--R KMRVYQQEEA LGSPEAHAVF ENSTTRP00000016477/1-805 ALEGPWSSQH LQPQRRASHG SEKKSAW--R KMRVYQQEEA LGSPEAHAVF 451 500 BACU005683/1-1035 LEPSQAT-EQ APSTGEPRPL ELPGPTRVGL EGPERRRFSA SELMTRLHSS ENSP00000270747/1-802 LEPGQVVQEQ ALSTEEPR-V ELSGSTRVSL EGPERRRFSA SELMTRLHSS ENSBTAP00000007450/1-807 LEPSQAA-EQ ELSTEEPRPA GLPGPVRGGL EGPERRRFSA SELMTRLHSS bmy_08224T0/1-760 LEPSQAT-EQ ALSTGEPRPL ELPGPTRVGL EGPERRRFSA SELMTRLHSS ENSTTRP00000016477/1-805 LEPSQAT-EQ ALSTAEPRPL ELPGPTRVGL EGPERRRFSA SELMTRLHSS 501 550 BACU005683/1-1035 LRLGRNSAAR ALTPGS--GP G-AARE---- ---------- ---------- ENSP00000270747/1-802 LRLGRNSAAR ALISGS--GT G-AAREGKAS GMEARSVEMS GDRVSRPAPG ENSBTAP00000007450/1-807 LRLGRNSAAR ALSPGSGSGP G-AAREGKAS GRDSRSVEMR ADATATPAPV bmy_08224T0/1-760 LRLGRNSAAR ALTPGS--GP G-AAREGKAS GRESRSVEMR VDAMAMPALV ENSTTRP00000016477/1-805 LRLGRNSAAR ALTPGS--GP GAAAREGKAS GRESRSVEMR VDAMAMPALV 551 600 BACU005683/1-1035 ---------- ---------- ---------- --------AV LYQEYSDVAS ENSP00000270747/1-802 D--SREGDWS EPRLDTQEEP PLGSRSTNER RQSRFLLNSV LYQEYSDVAS ENSBTAP00000007450/1-807 DLSGVPGSWP EPRLDAREEP APGPRSASER RQSRFLLNSV LYQEYSDVAS bmy_08224T0/1-760 DLSGGHGSCP EPRLDAQEEP APGSRSASER RQSRFLLNSV LYQEYSDVAS ENSTTRP00000016477/1-805 DLSGGHGSWP EPRLDAQEEP APGSRSASER RQSRFLLNSV LYQEYSDVAS 601 650 BACU005683/1-1035 ARELRRQQRE EEGPGDEAEG AEEGPGPPRA NLSPSSSFRA QRSARGSTFS ENSP00000270747/1-802 ARELRRQQRE EEGPGDEAEG AEEGPGPPRA NLSPSSSFRA QRSARGSTFS ENSBTAP00000007450/1-807 ARELRRQQRE EEGAADEAEG AEEGPGPPRA DLSPSSSFRE QRAARGSTFS bmy_08224T0/1-760 ARELRRQQRE EEGPGDEAEG AEEGPGPPRA NLSPSSSFRA QRSARGSTFS ENSTTRP00000016477/1-805 ARELRRQQRE EEGPGDEAEG AEEGPGPPRA NLSPSSSFRA QRSARGSTFS 651 700 BACU005683/1-1035 LWQDIPDVRG SGVLATLSLR DCKLQEAKFE LITSEASYIH SLSVAVGHFL ENSP00000270747/1-802 LWQDIPDVRG SGVLATLSLR DCKLQEAKFE LITSEASYIH SLSVAVGHFL ENSBTAP00000007450/1-807 LWQDIPDVRG SGVLATLSLR DCKLQEAKFE LITSEASYIH SLSVAVGHFL bmy_08224T0/1-760 LWQDIPDVRG SGVLATLSLR DCKLQEAKFE LITSEASYIH SLSVAVGHFL ENSTTRP00000016477/1-805 LWQDIPDVRG SGVLATLSLR DCKLQEAKFE LITSEASYIH SLSVAVGHFL 701 750 BACU005683/1-1035 GSAELSECLG VQDKQWLFSK LPEVKSTSER FLQDLEQRLE ADVLRFSVCD ENSP00000270747/1-802 GSAELSECLG AQDKQWLFSK LPEVKSTSER FLQDLEQRLE ADVLRFSVCD ENSBTAP00000007450/1-807 GSAELSECLG TQDKQWLFSK LPEVKSTSER FLQDLEQRLE ADVLRFSVCD bmy_08224T0/1-760 GSAELSECLG VQDKQWLFSK LPEVKSTSER FLQDLEQRLE ADVLRFSVCD ENSTTRP00000016477/1-805 GSTELSECLG VQDKQWLFSK LPEVKSTSER FLQDLEQRLE ADVLRFSVCD 751 800 BACU005683/1-1035 VVLHHCPAFR RVYLPYVTNQ AYQERTYQRL LLENPKFPSI LARLEESPVC ENSP00000270747/1-802 VVLDHCPAFR RVYLPYVTNQ AYQERTYQRL LLENPRFPGI LARLEESPVC ENSBTAP00000007450/1-807 VVLQHCPAFR RVYLPYVTNQ AYQERTYQRL LLENPKFPGI LARLEESPVC bmy_08224T0/1-760 VVLHHCPAFR RVYLPYVTNQ AYQERTYQRL LLENPKFPSI LARLEESPVC ENSTTRP00000016477/1-805 IVLHHCPAFR RVYLPYVTNQ AYQERTYQRL LLENPKFPSI LARLEESPVC 801 850 BACU005683/1-1035 QRLPLTSFLI LPFQRITRLK MLVENILKRT AQGSEDEDMA TKAFNALKEL ENSP00000270747/1-802 QRLPLTSFLI LPFQRITRLK MLVENILKRT AQGSEDEDMA TKAFNALKEL ENSBTAP00000007450/1-807 QRLPLASFLI LPFQRITRLK MLVENILKRT AQGSEDEDMA TKAFNALKEL bmy_08224T0/1-760 QRLPLTSFLI LPFQRITRLK MLVENILKRT AQGSEDEDMA TKAFNALKEL ENSTTRP00000016477/1-805 QRLPLTSFLI LPFQRITRLK MLVENILKRT AQGSEDEDMA TKAFNALKEL 851 900 BACU005683/1-1035 VQECNASVQS MKRTEELIHL SKKIHFEGKI FPLISQARWL VRHGELVELA ENSP00000270747/1-802 VQECNASVQS MKRTEELIHL SKKIHFEGKI FPLISQARWL VRHGELVELA ENSBTAP00000007450/1-807 VQECNASVQS MKRTEELIHL SKKIHFEGKI FPLISQARWL VRHGELVELA bmy_08224T0/1-760 VQECNASVQS MKRTEELIHL SKKIHFEGKI FPLISQARWL VRHGELVELA ENSTTRP00000016477/1-805 VQECNASVQS MKRTEELIHL SKKIHFEGKI FPLISQARWL VRHGELVELA 901 950 BACU005683/1-1035 PLPAAPPAKL KLSSKAVYLH LFNDCLLLSR RKSCRLGKFA VFVHAKMAEL ENSP00000270747/1-802 PLPAAPPAKL KLSSKAVYLH LFNDCLLLSR RKE--LGKFA VFVHAKMAEL ENSBTAP00000007450/1-807 PLPAVPPAKL KLSSKAVYLH LFNDCLLLSR RKE--LGKFA VFVHAKMAEL bmy_08224T0/1-760 PLPTAPPAKL KLSSKAVYLH LFNDCLLLSR RKE--LGKFA VFVHAKMAEL ENSTTRP00000016477/1-805 PLPAAPPSKL KLSSKAVYLH LFNDCLLLSR RKE--LGKFA VFVHARMAEL 951 1000 BACU005683/1-1035 QVKDLSLKLQ GIPGHVFLLQ LLHGQHTKHQ FLLRARTESE KQRWISAMCP ENSP00000270747/1-802 QVRDLSLKLQ GIPGHVFLLQ LLHGQHMKHQ FLLRARTESE KQRWISALCP ENSBTAP00000007450/1-807 QVKDLSLKLQ GIPGHVFLLQ LLHGQRTKHQ FLLRARTESE KQRWISAMCP bmy_08224T0/1-760 QVKDLSLKLQ GIPGHVFLLQ LLHGQHTKHQ FLLRARTESE KQRWISAMCP ENSTTRP00000016477/1-805 QVKDLSLKLQ GIPGHVFLLQ LLHGQHTKHQ FLLRARTESE KQRWISAMCP 1001 1050 BACU005683/1-1035 SSPQEDKEAI SEGEDRPQVQ CVRTYKALQP DELTLEKTDI LAVRTRTSDG ENSP00000270747/1-802 SSPQEDKEVI SEGEDCPQVQ CVRTYKALHP DELTLEKTDI LSVRTWTSDG ENSBTAP00000007450/1-807 SSPQEDKEVI SEGEDHPQVQ CVRTYKALQP DELTLEKTDI LAVRMRTSDG bmy_08224T0/1-760 SSPQEDKEVI SEGEDRPQVQ CVRTYKALQP DELTLEKTDI LAVRTRTSD- ENSTTRP00000016477/1-805 STPQEDREVI SEGEDRPQVQ CVRTYKALQP DELTLEKTDI LAVRTRTSDG 1051 1100 BACU005683/1-1035 WLEGVRLADG EKGWVPQAYV EEISSLSARL RNLRENKRIT SATSKLGEPP ENSP00000270747/1-802 WLEGVRLADG EKGWVPQAYV EEISSLSARL RNLRENKRVT SATSKLGEAP ENSBTAP00000007450/1-807 WLEGVRLADG EKGWVPQAYV EEISSLSARL RNLRENKRVS SATSKLGGPP bmy_08224T0/1-760 ---------- ---------- ---------V QIMRQA---- ---------- ENSTTRP00000016477/1-805 WLEGVRLADG EKGWVPQAYV EEISSLSARL RNLRENKRIT TAASKLGE-P 1101 1150 BACU005683/1-1035 V ENSP00000270747/1-802 V ENSBTAP00000007450/1-807 V bmy_08224T0/1-760 - ENSTTRP00000016477/1-805 V