KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:07 2014 Check: 00 .. Name: ENSP00000364782/1-415 Len: 421 Check: 4067 Weight: 1.00 Name: ENSBTAP00000007454/1-415 Len: 421 Check: 4564 Weight: 1.00 Name: ENSTTRP00000013411/1-416 Len: 421 Check: 2511 Weight: 1.00 Name: bmy_03130T0/1-416 Len: 421 Check: 1790 Weight: 1.00 Name: BACU015885/1-403 Len: 421 Check: 9189 Weight: 1.00 // 1 50 ENSP00000364782/1-415 MTGERPSTAL PDRRWGPRIL GFWGGCRVWV FAAIF-LLLS LAASWSKAEN ENSBTAP00000007454/1-415 MTEEGPGIVS LGKLRRPRML RLWGICRVQI FSAIF-MLMS PAGVGAGAKD ENSTTRP00000013411/1-416 MTAERPGTVP LGRPGRPRML GSWGVCRVQV FAAIFLLLLS SAGVGARAKD bmy_03130T0/1-416 MTTERPGTVT LGRPGRPRML GSWGVCRVQV FAAIFLLLLS SAGVGAKAKD BACU015885/1-403 ---------- --------ML GSWGVCRVQV FAAIFLLLLS SAGVGARVKD 51 100 ENSP00000364782/1-415 DFGLVQPLVT MEQLLWVSGR QIGSVDTFRI PLITATPRGT LLAFAEARKM ENSBTAP00000007454/1-415 DFSLVHPLVT MEQLLWVSGK QIGSVDTFRI PLITTTPRGT LLAFAEARKM ENSTTRP00000013411/1-416 DFSLVRPLVT MEQLLWVSGK QIGSVDTFRI PLITTTPRGT LLAFAEARKM bmy_03130T0/1-416 DFSLVHPLVT MEQLLWVSGK QIGSVDTFRI PLITTTPRGT LLAFAEARKM BACU015885/1-403 DFSLVHPLVT MEQLLWVSGK QIGSVDTFRI PLITTTPRGT LLAFAEARKM 101 150 ENSP00000364782/1-415 SSSDEGAKFI ALRRSMDQGS TWSPTAFIVN DGDVPDGLNL GAVVSDVETG ENSBTAP00000007454/1-415 STSDKGAKFI ALRRSMDQGS TWSPTAFIVD DGETPDGLNL GAVVSDTTTG ENSTTRP00000013411/1-416 SASDKGAKFI ALRRSTDQGS TWSPTAFIVD DGESPDGLNL GAVVSDTTTG bmy_03130T0/1-416 SASDKGAKFI ALRRSTDQGS TWSPTAFIVD DGESPDGLNL GAVVSDTTTG BACU015885/1-403 SASDKGAKFI ALRRSTDQGS TWSPTAFIVD DGESPDGLNL GAVVSDTTTG 151 200 ENSP00000364782/1-415 VVFLFYSLCA HKAGCQVAST MLVWSKDDGV SWSTPRNLSL DIGTEVFAPG ENSBTAP00000007454/1-415 VVFLFYSLCA HKAGCQVAST MLVWSKDDGV SWSSPRNLSL DIGTEMFAPG ENSTTRP00000013411/1-416 VVFLFYSLCA HKAGCQVAST MLVWSKDDGI SWSSPRNLSL DIGTEMFAPG bmy_03130T0/1-416 VVFLFYSLCA HKAGCQVAST MLVWSKDDGV SWSSPRNLSL DIGTEMFAPG BACU015885/1-403 VVFLFYSLCA HKAGCQVAST MLVWSKDDGV SWSSPRNLSL DIGTEMFAPG 201 250 ENSP00000364782/1-415 PGSGIQKQRE PRKGRLIVCG HGTLERDGVF CLLSDDHGAS WRYGSGVSGI ENSBTAP00000007454/1-415 PGSGIQKQRE PRKGRLIVCG HGTLERDGVF CLLSDDHGVS WRYGGGVSGI ENSTTRP00000013411/1-416 PGSGIQKQRE PRKGRLIVCG HGTLERDGVF CLLSDDRGAS WHYGSGVSGI bmy_03130T0/1-416 PGSGIQKQRE PRKGRLIVCG HGTLERDGVF CLLSDDRGAS WRYGSGVSGI BACU015885/1-403 PGSGIQKQRE PRKGRLIVCG HGTLERDGVF CLLSDDRGAS WRYGNGVSGI 251 300 ENSP00000364782/1-415 PYGQPKQEND FNPDECQPYE LPDGSVVINA RNQNNYHCHC RIVLRSYDAC ENSBTAP00000007454/1-415 PYGQPKREND FNPDECQPYE LPDGSVVINA RNQNNYHCHC RIILRSYDAC ENSTTRP00000013411/1-416 PYGQPKREND FSPDECQPFE LPDGSVVINA RNQNNYHCRC RIILRSYDAC bmy_03130T0/1-416 PYGQPKREND FSPDECQPFE LPDGSVVINA RNQNNYHCRC RIILRSYDAC BACU015885/1-403 PYGQPKREND FSPDECQPFE LPDGSVVINA RNQNNYHCHC RIILRSYDAC 301 350 ENSP00000364782/1-415 DTLRPRDVTF DPELVDPVVA AGAVVTSSGI VFFSNPAHPE FR-----VNL ENSBTAP00000007454/1-415 DTLRPRDVTF DTELVDPVVA AGAVATSSGI VFFSNPAHPE FR-----VNL ENSTTRP00000013411/1-416 DTLRPRDVTF DPELVDPVVA AGAVATNSGI VFFSNPAHPE FR-----VNL bmy_03130T0/1-416 DTLRPRDVTF DPELVDPVVA AGAVATNSGI VFFSNPAHPE FR-----VNL BACU015885/1-403 DTLRPRDVTF DPELVDPVVA AGAVATNSGI VFFSNPAHPE FREYLPGVNL 351 400 ENSP00000364782/1-415 TLRWSFSNGT SWRKETVQLW PGPSGYSSLA TLEGSMDGEE QAPQLYVLYE ENSBTAP00000007454/1-415 TLRWSFSNGT SWRKETVQLW PGPSGYSSLT TLEGNVDGKD EAPQLYVLYE ENSTTRP00000013411/1-416 TLRWSFSNGT SWQKETVQLW PGPSGYSSLA TLEGSVGGED QAPQLYVLYE bmy_03130T0/1-416 TLRWSFSNGT SWQKETVQLW PGPSGYSSLA TLEGSVGGED QAPQLYVLYE BACU015885/1-403 TLRWSFSNGT SWQKETVQLW PGPSGYSSLA TLEGSVGGED QAPQLYVLYE 401 450 ENSP00000364782/1-415 KGRNHYTESI SVAKISVYGT L ENSBTAP00000007454/1-415 KGRNQYMESI SLVKVSVYGT L ENSTTRP00000013411/1-416 KGRKQYIESI SLAKVSVYGT L bmy_03130T0/1-416 KGRKQYIESI SVAKVSVFGT L BACU015885/1-403 KGRKQYIESI SLAKVSVFGT L