KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:10 2014 Check: 00 .. Name: ENSP00000316786/1-405 Len: 405 Check: 4334 Weight: 1.00 Name: ENSBTAP00000007470/1-404 Len: 405 Check: 1657 Weight: 1.00 Name: BACU018105/1-322 Len: 405 Check: 1312 Weight: 1.00 Name: bmy_05263T0/1-404 Len: 405 Check: 909 Weight: 1.00 Name: ENSTTRP00000000424/1-338 Len: 405 Check: 4198 Weight: 1.00 // 1 50 ENSP00000316786/1-405 MERWPWPSGG AWLLVAARAL LQLLRSDLRL GRPLLAALAL LAALDWLCQR ENSBTAP00000007470/1-404 MESWPWPSGG AWLLVAARAL LQLLRADLRL GRPLLAALAL LAALDWLCQR BACU018105/1-322 MDA------- ---------- ---------- ---------- ---------- bmy_05263T0/1-404 MESWPWPSGG AWLLVAARAL LQLLRADLRL GRPLLAALAL LAALDWLCQR ENSTTRP00000000424/1-338 MESWPWPSGG AWLLVAARAL LQLLRADLRL GRPLLAALAL LAALDWLCQR 51 100 ENSP00000316786/1-405 LLPPPAALAV LAAAGWIALS RLARPQRLPV ATRAVLITGC DSGFGKETAK ENSBTAP00000007470/1-404 LLPPLAALAV LAATGWIVLS RLARPQRLPV ATRAVLITGC DSGFGNATAK BACU018105/1-322 ---------- ---------- ----KHRVP- ---------- DTGVGKATAK bmy_05263T0/1-404 LLPPLAALAV LAATGWIVLS RLARPQRLPV ATRAVLITGC DSGFGKATAK ENSTTRP00000000424/1-338 LLPPLAALAV LAATGWIVLS RLARPQRLPV ATRAVLITGC DSGFGKATAK 101 150 ENSP00000316786/1-405 KLDSMGFTVL ATVLELNSPG AIELRTCCSP RLRLLQMDLT KPGDISRVLE ENSBTAP00000007470/1-404 KLDTMGFTVL ATVLDLNSPG ALELRACCSS RLKLLQMDLT KPADISRVLE BACU018105/1-322 KLDVLGFTVL ATVLDLNSPG ALELRACCSP RLKLLQMDLT KPADISRVLE bmy_05263T0/1-404 KLDTLGFTVL ATVLDLNSPG ALELRACCSP RLKLLQMDLT KPADISRVLE ENSTTRP00000000424/1-338 KLDALGFTVL ATVLDLNSPG ALELRACCSP HLKLLQMDLT KPADISRVLE 151 200 ENSP00000316786/1-405 FTKAHTTSTG LWGLVNNAGH NEVVADAELS PVATFRSCME VNFFGALELT ENSBTAP00000007470/1-404 FTKVHTASTG LWGLVNNAGQ NIFVADAELC PVATFRTCME VNFFGALEMT BACU018105/1-322 FTKAHTASTG LWGLVNNAGQ NILVADAELS PVSTFRSCME VNFFGTLEMT bmy_05263T0/1-404 FTKAHTASTG LWGLVNNAGQ NILVADAELS PVSTFRSCME VNFFGTLEMT ENSTTRP00000000424/1-338 FTKAHTASTG LWGLVNNAGQ NILVADAELS PVSTFRSCME VNFFGTLEMT 201 250 ENSP00000316786/1-405 KGLLPLLRSS RGRIVTVGSP AGDMPYPCLG AYGTSKAAVA LLMDTFSCEL ENSBTAP00000007470/1-404 KGLLPLLRRS SGRIVTVSSP AGDMPFPCLA AYGTSKAALA LLMGNFSCEL BACU018105/1-322 KGLLPLLRHS SGRIVTVSSP AGDMPFPCLA AYGTSKAAVA LLMDTFSCEL bmy_05263T0/1-404 KGLLPLLRHS SGRIVTVSSP AGDMPFPCLA AYGTSKAAVA LLMDTFSCEL ENSTTRP00000000424/1-338 KGLLPLLRHS SGRIVTVSSP AGDMPFPCLA AYGTSKAAVA LLMDTFSCEL 251 300 ENSP00000316786/1-405 LPWGVKVSII QPGCFKTESV RNVGQWEKRK QLLLANLPQE LLQAYGKDYI ENSBTAP00000007470/1-404 LPWGVKVSII QPACFKTESV KDVHQWEERK QQLLATLPQE LLQAYGEDYI BACU018105/1-322 LPWGVKVSVI QPACFKTEAV KDMDQWEERK RQLLANLPRE LLQAYGEDYI bmy_05263T0/1-404 LPWGVKVSVI QPACFKTEAV KDMDQWEERK RQLLANLPRE LLQAYGEDYI ENSTTRP00000000424/1-338 LPWGVKVSVI QPACFKTEAV KDMDQWEERK RQLLANLPRE LLQAYGEDYI 301 350 ENSP00000316786/1-405 EHLHGQFLHS LRLAMSDLTP VVDAITDALL AARPRRRYYP GQGLGLMYFI ENSBTAP00000007470/1-404 EHLNGQFLHS LSQALPDLSP VVDAITDALL AAQPRRRYYP GHGLGLIYFI BACU018105/1-322 EHLNGQFLHC LSQALPDLSP VVDAITDALL AAQPRRRYYP GHGLGLMYFI bmy_05263T0/1-404 EHLNGQFLHC LSQALPDLSP VVDAITDALL AAQPRRRYYP GHGLGLMYFI ENSTTRP00000000424/1-338 EHLNGQFLHC LSQALPDLSP VVDAITDALL AAQPRRRY-- ---------- 351 400 ENSP00000316786/1-405 HYYLPEGLRR RFLQAFFISH CLPRALQPGQ PGTTPPQDAA QDPNLSPGPS ENSBTAP00000007470/1-404 HYYLPEGLRQ RFLQSFFISP YVPRALQAGQ PGLTSARDIA QDQGPRPDPS BACU018105/1-322 HYYLPEGLRR RFLQSFFISP YVPRALRPGQ PSLTSARDVA QDPGPKPGPS bmy_05263T0/1-404 HYYLPEGLRR RFLQSFFISP YVPRALRPGQ PGLTSARDVA QDPGPKPGPS ENSTTRP00000000424/1-338 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000316786/1-405 PAVAR ENSBTAP00000007470/1-404 PTAQ- BACU018105/1-322 PTAQ- bmy_05263T0/1-404 PTAQ- ENSTTRP00000000424/1-338 -----