KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:11 2014 Check: 00 .. Name: ENSP00000358016/1-414 Len: 468 Check: 3306 Weight: 1.00 Name: ENSBTAP00000007486/1-414 Len: 468 Check: 3991 Weight: 1.00 Name: bmy_10888T0/1-396 Len: 468 Check: 6901 Weight: 1.00 Name: BACU014188/1-437 Len: 468 Check: 3015 Weight: 1.00 Name: ENSTTRP00000008330/1-413 Len: 468 Check: 3565 Weight: 1.00 // 1 50 ENSP00000358016/1-414 MQSQRIPGRK RGRPSLHSTP MKMAVHNLYS ASAGSLPAVK IPKKRGRKPG ENSBTAP00000007486/1-414 MQSQRIPGRK RGRPPLHSTP VKMAVHNIYS ASAGSLPAVK IPKKRGRKPG bmy_10888T0/1-396 ---------- ---------- ---------- ---------- ---------M BACU014188/1-437 MQSQRIPGRK RGRPPLHSTP MKMAVHNLYS ASAGSLPAVK IPKKRGRKPG ENSTTRP00000008330/1-413 MQSQRIPGRK RGRPPLHSTP MKMAVHNLYS ASAGSLPAVK IPKKRGRKPG 51 100 ENSP00000358016/1-414 YKIKSRVLMT PLALSPPRST PEPDLSSIPQ DAATVPSLAA PQALTVCLYI ENSBTAP00000007486/1-414 YKLKSRVLMT PLALSPPRST PEPDLSSIPQ DAATVPSLAA SQALTVCLYI bmy_10888T0/1-396 CKLKSRVLMT PLALSPPRST PEPDLSSIPQ DAATIPSLAA PQALTVCLYI BACU014188/1-437 YKLKSRVLMT PLALSPPRST PEPDLSSIPQ DAATIPSLAV PQALTVCLYI ENSTTRP00000008330/1-413 YKLKSRVLMT PLALSPPRST PEPDLSSIPQ DAATIPSLAA PQALTVCLYI 101 150 ENSP00000358016/1-414 NKQANAGPYL ERKKVQQLPE HFGPERPSAV LQQAVQACID CAHQQKLVFS ENSBTAP00000007486/1-414 NKQANAGPYL ERRKVQQLPE HFGPERPSAV LQQAVQACID CAHQQKLVFS bmy_10888T0/1-396 NKQANAGPYL ERRKVQQLPE HFGPERPSAV LQQAVQACID CAHQQKLVFS BACU014188/1-437 NKQANAGPYL ERRKVQQLPE HFGPERPSAV LQQAVQACID CAHQQKLVFS ENSTTRP00000008330/1-413 NKQANAGPYL ERRKVQQLPE HFGPERPSAV LQQAVQACID CAHQQKLVFS 151 200 ENSP00000358016/1-414 LVKQGYGGEM VSVSASFDGK QHLRSLPVVN SIGYVLRFLA KLCRSLLCDD ENSBTAP00000007486/1-414 LVKQGYGGEM VSVSASFDGK QHLRSLPVVN SVGYVLRFLT KLCRSLLCDD bmy_10888T0/1-396 LVKQGYGGEM VSVSASFDGK QHLRSLPVVN SIGYVLRFLA KLCRSLLCDD BACU014188/1-437 LVKQGYGGEM VSVSASFDGK QHLRSLPVVN SIGYVLRFLA KLCRSLLCDD ENSTTRP00000008330/1-413 LVKQGYGGEM VSVSASFDGK QHLRSLPVVN SIGYVLRFLA KLCRSLLCDD 201 250 ENSP00000358016/1-414 LFSHQPFPRG CSASEKVQEK EEGRMES--- ---------- ---------- ENSBTAP00000007486/1-414 LFSHQPFPRG TSASDNAPES QEGRMES--- ---------- ---------- bmy_10888T0/1-396 LFSHQPFPRG TSASEEAPES QEDRMES--- ---------- ---------- BACU014188/1-437 LFSHQPFPRG TGASEEAPES QEDRMESGFG EDHGAIQISI CVPSLLALVE ENSTTRP00000008330/1-413 LFSHQPFPRG TSASEEAPES QEDRMES--- ---------- ---------- 251 300 ENSP00000358016/1-414 VKTVTTEEYL VNPVGMNRYS VDTSASTFNH RGSLHPSSSL YCKRQNSGDS ENSBTAP00000007486/1-414 AKTVTAEECL VNPASMNRYG VDTSSPTFSH RGSLPTSSSL YCKRQNSGDG bmy_10888T0/1-396 AKTVTTEECL VNPASMNRYS VDSSSAAFSH RGSLPTSSSL YCKRQNSGDG BACU014188/1-437 AKTVTTEECL VNPASMNRYS VDSSSSAFSH RGSLPTSSSL YCKRQNSGDG ENSTTRP00000008330/1-413 ANTVTTEECL VNPASMSRYS VDSSS-AFSH RGSLPTSSSL YCKRQNSGDG 301 350 ENSP00000358016/1-414 HLGGGPAATA GGPRTSPMSS GGPSAPGLRP PASSPKRNTT SLEGNRC--- ENSBTAP00000007486/1-414 HLGGGSATTV SGPRASPLSP GGPSAPGLRP PGSSPKRNGT ALEGNRC--- bmy_10888T0/1-396 HLGGGSATTV GGPHTSPMSS GGPSAPGLRP PGSSPKRNGT SLEGNRCDII BACU014188/1-437 HLGGGSATTV GGPHTSPMSS GGPSAPGLRP PGSSPKKNGT SLEGNRC--- ENSTTRP00000008330/1-413 HLGGGSATTV GGPHTSPMSS GGPSAPGLRP PGSSPKRNGT SLEGNRC--- 351 400 ENSP00000358016/1-414 ---------- ---------- --------AS SPSQDAQDAR RPRSRNPSAW ENSBTAP00000007486/1-414 ---------- ---------- --------AS NPSPDRQDAR RPRSRNPSSW bmy_10888T0/1-396 TENYKEVLDN KSFLTFALTG DAVEFPTTTS SPSPDRQDTR RPRSRNPSTW BACU014188/1-437 ---------- ---------- --------AS SPSPDRQDTR RPRSRNPSTW ENSTTRP00000008330/1-413 ---------- ---------- --------AS SPSPDRQDTR RPRSRNPSTW 401 450 ENSP00000358016/1-414 TVEDVVWFVK DADPQALGPH VELFRKHEID GNALLLLKSD MVMKYLGLKL ENSBTAP00000007486/1-414 SVEDVVWFLK DADPQALGPH VELFRKHEID GNALLLLKSD MIMKYLGLKL bmy_10888T0/1-396 SVEDVVWFVK DADPQALGPH VELFRKHEID GNALLLLKSD MIMKYLGLKL BACU014188/1-437 SVEDVVWFVK DADPQALGPH VELFRKHEID GNALLLLKSD MIMKYLGLKL ENSTTRP00000008330/1-413 SVEDVVWFVK DADPQALGPH VELFRKHEID GNALLLLKSD MIMKYLGLKL 451 500 ENSP00000358016/1-414 GPALKLCYHI DKLKQAKF ENSBTAP00000007486/1-414 GPALKLCYHI DKLKQDKF bmy_10888T0/1-396 GPALKLCYHI DKLKQAKF BACU014188/1-437 GPALKLCYHI DKLKQAKF ENSTTRP00000008330/1-413 GPALKLCYHI DKLKQAKF