KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:13 2014 Check: 00 .. Name: ENSP00000264257/1-575 Len: 584 Check: 9414 Weight: 1.00 Name: bmy_09504T0/1-329 Len: 584 Check: 5506 Weight: 1.00 Name: ENSTTRP00000015514/1-570 Len: 584 Check: 8276 Weight: 1.00 Name: ENSBTAP00000007489/1-582 Len: 584 Check: 1442 Weight: 1.00 Name: BACU004069/1-480 Len: 584 Check: 8347 Weight: 1.00 // 1 50 ENSP00000264257/1-575 MWSLLLCGLS IALPLSVTAD GCKDIFMKNE ILSASQPFAF NCTFPPITSG bmy_09504T0/1-329 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015514/1-570 MPLLLLCVVC TALPRFIRAD ACEDVSMQ-D TVSVGQPTAF HCIYPLPTSG ENSBTAP00000007489/1-582 MLSLLLCVVS IALPRFIRAD TCEDLTLQ-E MASVDQPTAF NCIYSLPTSG BACU004069/1-480 MLLLLLCVVS SALPRFIRAD ACEDVSMQ-E TVSVGQPTAF NCIYPLPTSG 51 100 ENSP00000264257/1-575 EVSVTWYKNS SKIPVSKIIQ SRIHQDETWI LFLPMEWGDS GVYQCVIKGR bmy_09504T0/1-329 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015514/1-570 KVDATWYKYP RKIPVSKNIQ SRIHQDQNWI LFLPVKGEDS GIYYCDTNDT ENSBTAP00000007489/1-582 KVDATWYKYP SKIPISKNKQ SRIHQDQNWI LFLPVKGEDS GIYQCHTNDT BACU004069/1-480 RVDATWYKYP RKIPVSKNIQ SRIHQDQNWI LFLPVKGEDS GIYHCDTNDT 101 150 ENSP00000264257/1-575 DSCHRIHVNL TVFEKHWCDT SIGGLPNLSD EYKQILHLGK DDSLTCHLHF bmy_09504T0/1-329 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015514/1-570 NTCPRMQVNL TVFKKHWCGT SGNSQPHVPD EYRQILYVGR DDILICPLNF ENSBTAP00000007489/1-582 DICPRMQVNL TVFEQYWCGA SENSQLNVSH EYKQILQVGR DDILICHLNF BACU004069/1-480 NICPRMQVNL TVFKKHWCGT SRNSQPNVPD EYKQILYVGK DDTLMCHLNF 151 200 ENSP00000264257/1-575 PKSCVLGPIK WYKDCNEIKG ERFTVLETRL LVSNVSAEDR GNYACQAILT bmy_09504T0/1-329 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015514/1-570 PNSFHLDSVK WYKDCKEIEG ERFISRRKKL LVKNVSTEDG GNYACQATLT ENSBTAP00000007489/1-582 PNNFYLDSVK WYKDCIEIEG ERFISRGKKL LVKNVSVEDR GNYECEASLT BACU004069/1-480 PNSFDLDSVK WYKDCKEIEG ERFISWGRKL LVTNVSAKDG GNYACQARLT 201 250 ENSP00000264257/1-575 HSGKQYEVLN GITVSITERA GYGGSVPKII YPKNHSIEVQ LGTTLIVDCN bmy_09504T0/1-329 ---------- ---------- ---------- ---------- --STLIVDCN ENSTTRP00000015514/1-570 YAKQQHTVLN SISVNITEKV GNGRRIPKII YPKNNSIEVK LGSTLIVDCN ENSBTAP00000007489/1-582 HAEKQHTVFN SISVTVTEKV GNGGRIPKII YPKNNSIEVK LGSMLIVNCN BACU004069/1-480 YAKKQHTVLN SISVKI-RKV GNGRRIPKII YPKNNSIEVN L--------- 251 300 ENSP00000264257/1-575 VTDTKDNTNL RCWRVNNTLV DDYYDESKRI REGVETHVSF REHNLYTVNI bmy_09504T0/1-329 ITDTQGNTNP RYWKVNNTLV NVYYKESKRI QEGSENYTVF QGHLFYTMNI ENSTTRP00000015514/1-570 ITDAWGNTNP RCWKVNNTLV DVYYKESKRI QEGIXXXXXX XXXXXXXXXX ENSBTAP00000007489/1-582 ITDSWDNTNP RCWRVNNTLV DDYYGESKRI QEGIENYTIF PEHIFYTVNI BACU004069/1-480 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000264257/1-575 TFLEVKMEDY GLPFMCHAGV STAYIILQLP APDFRAYLIG GLIALVAVAV bmy_09504T0/1-329 TFLEVKMEDY GHPFTCHAGV SAAYVILKRP VSNFQAYLIG GLLVLTSAAV ENSTTRP00000015514/1-570 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000007489/1-582 TFLEVKMEDY GHPFVCHAGV SAAYFILTLP VPDFRAYLIG GLLILTGAVV BACU004069/1-480 ---------- ---------- ---------- VPDFQAYLIG GLLVLTSVAV 351 400 ENSP00000264257/1-575 SVVYIYNIFK IDIVLWYRSA FHSTETIVDG KLYDAYVLYP KPHKESQRHA bmy_09504T0/1-329 SAVCIYNVFK IDIVLWYRSA FHSAGPIEDG KLYDAYVLCP KPQRESQSHD ENSTTRP00000015514/1-570 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXG KLYDAYVLYP KPQRESHSHD ENSBTAP00000007489/1-582 SAMCIYNIFK IDIVLWYRSS FHSAGPIEDG KLYDAYVLYP KPQRESQSHD BACU004069/1-480 SAVCIYNVFK IDIVLWYRSA FHSAGPIEDG KLYDAYVLCP KPQRESQSHD 401 450 ENSP00000264257/1-575 VDALVLNILP EVLERQCGYK LFIFGRDEFP GQAVANVIDE NVKLCRRLIV bmy_09504T0/1-329 VDTLVLKILP KVLERQCGYK LFIFGRDDFP GQAVVNVIDE NIKLCRRLII ENSTTRP00000015514/1-570 VDTLVLKILP EVLERQCGYK LFIFGRDDFP GQAVVDVTDE NIKLCRRLII ENSBTAP00000007489/1-582 VDTLVLKILP EVLERQCGYK LFIFGRDEFP GQAVVNVIDE NIRLCRRLII BACU004069/1-480 VDTLVLKILP KVLERQCGYK LFIFGRDDFP GQAVVNVIDE NIKLCRRLII 451 500 ENSP00000264257/1-575 IVVPESLGFG LLKNLSEEQI AVYSALIQDG MKVILIELEK IEDYTVMPES bmy_09504T0/1-329 IIVPEALSLD LLRNMSEEQI AVYNVLIQDG IKVILIELEK VKDYTTLPES ENSTTRP00000015514/1-570 IIVPEALSLD LLRNMSEEQI AVYNVLIQDG IKVILIELEK VKDYTTLPES ENSBTAP00000007489/1-582 VIDPDELSLD LSKNLSEEQI AVYSALIQDG IKVILIELGK VKDYTALPES BACU004069/1-480 FIVPEALSLD LLRNMSEEQI AVYNVLIQDG IKVILIELEK VKDYTTLPES 501 550 ENSP00000264257/1-575 IQYIKQKHGA IRWHGDFTEQ SQCMKTKFWK TVRYHMPPRR CRPFPPVQLL bmy_09504T0/1-329 IQYIRQKHGA VQWSGDFTEQ SQCAKTKFWK KVRYHMPPKR WPPSPPVQLL ENSTTRP00000015514/1-570 IQYIKQKHGA IQWSGDFTEQ SQCAKTKFWK KVRYHMPPKR WPPSPPVRLL ENSBTAP00000007489/1-582 IQYIKQKHGA VQWSGDFTEQ SQCAKTEFWK KVRYRMPPKR WPPSPPVQLL BACU004069/1-480 IQYIRQKHGA VQWSGDFTEQ SQCAKTKFWK KVRYHMPPKR WPPSPPVQLL 551 600 ENSP00000264257/1-575 QHTPCYRTAG PELGSRRKKC TLTTG----- ---- bmy_09504T0/1-329 KHTP-FDLMD SKWEANVGFI TP-------- ---- ENSTTRP00000015514/1-570 KHTP-FDL-G PKWG-QGGEC THTG------ ---- ENSBTAP00000007489/1-582 KHTP-FDLTA SKWEAHAGFI SPDGKNIIPR VVHS BACU004069/1-480 KHTR-FDLMD SKWEANVGFI TP-------- ----