KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:15 2014 Check: 00 .. Name: ENSP00000443432/1-420 Len: 423 Check: 8688 Weight: 1.00 Name: ENSBTAP00000007525/1-407 Len: 423 Check: 9535 Weight: 1.00 Name: bmy_06100T0/1-308 Len: 423 Check: 2893 Weight: 1.00 Name: BACU007442/1-402 Len: 423 Check: 4281 Weight: 1.00 Name: ENSTTRP00000010402/1-406 Len: 423 Check: 6203 Weight: 1.00 // 1 50 ENSP00000443432/1-420 MLHFHYYDTS NKIMEPHRPN VKTAVPLSLE SYHISEEYGF LLPDSLKELP ENSBTAP00000007525/1-407 ---------- ---MEPQSQN LKTAPFLTLG RFHISEDYGF LLPNPLRELP bmy_06100T0/1-308 ---------- ---------- ---------- ---------- ---MPILGLP BACU007442/1-402 ---------- ---MDPQSQN LKTAPPLTLG RFHISEDYGF LLPNPLKELP ENSTTRP00000010402/1-406 ---------- ---MEPQSQN LKTAPSLTLG RFHISEDYGF LLPNPLKELP 51 100 ENSP00000443432/1-420 ---DHYRPWM EIANKLPQLI DAHQLQAHVD KMPLLSCQFL KGHREQRLAH ENSBTAP00000007525/1-407 ---GHYSPWM EIANRLPQLI ESRQLRAQVN EMPLLNCQFL TGYREWRLAR bmy_06100T0/1-308 CGEENVNLWF HLGLTVPP-- DSRQLLGPAY SL----CPDL SN-------H BACU007442/1-402 ---DYYRPWM EIANRLPHLI GSHQLRAQVN EMPLLNCQFL SGYREQRLAR ENSTTRP00000010402/1-406 ---DHYRPWM EIANRLPHLI GSHQLRAQVN EMPLLNCQFL TGYREQRLAH 101 150 ENSP00000443432/1-420 LVLSFLTMGY VWQEGEAQPA EVLPRNLALP FVEVSRNLGL PPILVHSDLV ENSBTAP00000007525/1-407 LVLSFITMGY VWQDGETQPK EILPRNLALP FVEVSRNLGL PPILVHSDLV bmy_06100T0/1-308 VVISL----- ---------- ---------P ---------- ---------- BACU007442/1-402 LVLTFITMGY VWQDGEAQPK EVLPRTLALP LVEVSRNLGL PPILLHSDLV ENSTTRP00000010402/1-406 LVLTFITMGY VWQDGEAQPK EVLPRTLALP LVEVSRTLGL PPILLHSDVV 151 200 ENSP00000443432/1-420 LTNWTKKDPD GFLEIGNLET IISFPGGESL HGFILVTALV EKEAVPGIKA ENSBTAP00000007525/1-407 LANWATRNPG GPLEIRNLDT IISFPGGESL RGFILVTVLV EKAAVPGIKA bmy_06100T0/1-308 ---------- -----RNLDP IFLFPGGESL RGFILVTVLV EKAAVPGIKA BACU007442/1-402 LANWATRNPG -----RNLDP IFLFPGGESL RGFILVTVLV EKAAVPGIKA ENSTTRP00000010402/1-406 LANWATRNPG RVMSLRNLDP IVLFR-GESL RGFILVTVLV EKAAVPGIKA 201 250 ENSP00000443432/1-420 LVQATNAILQ PNQEALLQAL QRLRLSIQDI TKTLGQMHDY VDPDIFYAGI ENSBTAP00000007525/1-407 LVQAVNAILQ SSPDSLLQAL QRLRVSIQDI TGALGQMHDY VDPDIFYAVI bmy_06100T0/1-308 LVQAVNAILL PSPDSLLQAL QRLRLSIQDI TRALGQMHDY VDPDIFYSVI BACU007442/1-402 LVQAANAVLL PSPDSLLQAL QRLRISIQDI TRALGQMHDY VDPDIFYSVI ENSTTRP00000010402/1-406 LVQAVNAVLL PSPDSLLQAL QQLRLSIQDI TRALGQMHDY VDPDIFYAVI 251 300 ENSP00000443432/1-420 RIFLSGWKDN PAMPAGLMYE GVSQEPLKYS GGSAAQSTVL HAFDEFLGIR ENSBTAP00000007525/1-407 RIFLSGWKDN PALPAGLVYE GVSKEPLSYS GGSAAQSTIL HAFDEFLGVR bmy_06100T0/1-308 RIFFSGWKDN PAMPAGLLYE GVSKEPLNYS GASAAQSSVL HAFDEFLGVR BACU007442/1-402 RIFFSGWKDN PAMPAGLLYE GVSKEPLNYS GASAAQSSVL HAFDEFLGVR ENSTTRP00000010402/1-406 RIFFSGWKDN PAMPAGLLYE GVSKEPLHYS GASAAQSTVL HAFDEFLGVR 301 350 ENSP00000443432/1-420 HSKESGDFLY RMRDYMPPSH KAFIEDIHSA PSLRDYILSS GQDHLLTAYN ENSBTAP00000007525/1-407 HSKESADFLH RMRDYMPPSH RAFLEEICVA PSLRTHVMSS GNGRLLTAYN bmy_06100T0/1-308 HSKESADFLH RMRDYMPPSH RAFIEEIHSA PSLRDHILSS GNSQLLTAHN BACU007442/1-402 HSKESADFLH RMRDYMPPSH RAFIEEIHSA PSLRDHILSS GNSQLLTAHN ENSTTRP00000010402/1-406 HSKESADFLH RMRDYMPPSH RAFIEEIHSA PSLRDHILSS GNSQLLTAYN 351 400 ENSP00000443432/1-420 QCVQALAELR SYHITMVTKY LITAAAKAKH GKPNHLPGPP QALKDRGTGG ENSBTAP00000007525/1-407 QCVESLAALR TYHLALVTKY LITAASRAKA QRTSHLPRPP QALEERGTGG bmy_06100T0/1-308 QCVEALAALR SYHLAMVTKY LITAAPKAKG RRTSHLPGPP QALEERGTGG BACU007442/1-402 QCVEALAALR SYHLAMVTKY LITAAPKAKG RRMSHLPGPP QALEERGTGG ENSTTRP00000010402/1-406 QCVEALAALR SYHLAMVTKY LITAAPKAKG RKTSHLPGPP QALEERGTGG 401 450 ENSP00000443432/1-420 TAVMSFLKSV RDKTLESILH PRG ENSBTAP00000007525/1-407 TAVVSFLKSV RDKTLETRLH PSG bmy_06100T0/1-308 TAVVRFLKSV RDKTLEAILH QSG BACU007442/1-402 TAVVRFLKSV RDKTLEAILH QSG ENSTTRP00000010402/1-406 TAVVRFLKSV RDKTIEAILH QSG