KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:15 2014 Check: 00 .. Name: bmy_15252T0/1-364 Len: 448 Check: 2782 Weight: 1.00 Name: BACU005758/1-354 Len: 448 Check: 4095 Weight: 1.00 Name: ENSP00000346694/1-353 Len: 448 Check: 9553 Weight: 1.00 Name: ENSTTRP00000000667/1-413 Len: 448 Check: 181 Weight: 1.00 Name: ENSBTAP00000007527/1-341 Len: 448 Check: 4208 Weight: 1.00 // 1 50 bmy_15252T0/1-364 ---------- ---------- ---------- --------ME KTLETVPLER BACU005758/1-354 ---------- ---------- ---------- MAEASKPMMK KAPKSVPLER ENSP00000346694/1-353 ---------- ---------- ---------- --------ME KTLETVPLER ENSTTRP00000000667/1-413 VSRGEGSRKA AAAALAAVAA APGPEWRCSR CCFSTSGSSH YSARTSPVRV ENSBTAP00000007527/1-341 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_15252T0/1-364 K--------- ---------- ---KREKEQF RKLFIGGLSF ETTEESLRNY BACU005758/1-354 N--------- ---------- ---KREKEQF RKLFIGGLSS ETTEESLWNY ENSP00000346694/1-353 K--------- ---------- ---KREKEQF RKLFIGGLSF ETTEESLRNY ENSTTRP00000000667/1-413 RPRRSLSSRS AAGNRAEATE SAMEREKEQF RKLFIGGLSF ETTEESLRNY ENSBTAP00000007527/1-341 M--------- ---------- ---EREKEQF RKLFIGGLSF ETTEESLRNY 101 150 bmy_15252T0/1-364 YEQWGKLTDC VVMRDPASKR SRGFGFVTFS SMAEVDAAMA ARPHSIDGRV BACU005758/1-354 YQQWGYLTDC VLIRETVSQK SRRFGFVTFS SMAEVDAVMA ARPHSIDGKT ENSP00000346694/1-353 YEQWGKLTDC VVMRDPASKR SRGFGFVTFS SMAEVDAAMA ARPHSIDGRV ENSTTRP00000000667/1-413 YEQWGKLTDC VVMRDPASKR SRGFGFVTFS SMAEVDAAMA ARPHSIDGRV ENSBTAP00000007527/1-341 YEQWGKLTDC VVMRDPASKR SRGFGFVTFS SMAEVDAAMA ARPHSIDGRV 151 200 bmy_15252T0/1-364 VEPKRAVARE ESGKPGAHVT VKKLFVGGIK EDTEEHHLRD YFEEYGKIDT BACU005758/1-354 VTPKRAVPRE DYGKPGALVT VKKLFVGGIA EDTEEHHLRD YFEKYGKINA ENSP00000346694/1-353 VEPKRAVARE ESGKPGAHVT VKKLFVGGIK EDTEEHHLRD YFEEYGKIDT ENSTTRP00000000667/1-413 VEPKRAVARE ESGKPGAHVT VKKLFVGGIK EDTEEHHLRD YFEEYGKIDT ENSBTAP00000007527/1-341 VEPKRAVARE ESGKPGAHVT VKKLFVGGIK EDTEEHHLRD YFEEYGKIDT 201 250 bmy_15252T0/1-364 IEIITDRQSG KKRGFGFVTF DDHDPVDKIV LQKYHTINGH NAEATLVLEI BACU005758/1-354 IEIITDGQSG KKRGFGFVAF DDHDPVDKIV LQKNHTINGH HAEV------ ENSP00000346694/1-353 IEIITDRQSG KKRGFGFVTF DDHDPVDKIV LQKYHTINGH NAEV------ ENSTTRP00000000667/1-413 IEIITDRQSG KKRGFGFVTF DDHDPVDKIV LQKYHTINGH NAEV------ ENSBTAP00000007527/1-341 IEIITDRQSG KKRGFGFVTF DDHDPVDKIV LQKYHTINGH NAEV------ 251 300 bmy_15252T0/1-364 LAEVVEILDQ DQEVTSEEDL MDMEVVVDLG MAIMGMEEDL EVAILEVALV BACU005758/1-354 ---------- -RKALSRQEM QEGQCSRSGR GRNAGFVYF- ---------- ENSP00000346694/1-353 ---------- -RKALSRQEM QEVQSSRSGR GGNFGFGDS- ---------- ENSTTRP00000000667/1-413 ---------- -RKALSRQEM QEVQSSRSGR GGNFGFGDS- ---------- ENSBTAP00000007527/1-341 ---------- -RKALSRQEM QEVQSSRSGR GGNFGFGDS- ---------- 301 350 bmy_15252T0/1-364 MEEEEEDMVV EDLDMATRVG ATEVVMTTME EETMVQEAVE EVGVMEGEAD BACU005758/1-354 -HGGGGKFGA GNFGGRNFRG GSD----GYG RRHTFGDGYH GS----GGGN ENSP00000346694/1-353 -RGGGGNFGP GP--GSNFRG GSD----GYG SGRGFGDGYN GYGGGPGGGN ENSTTRP00000000667/1-413 -RGGGGNFGP GP--GSNFRG GSD----GYG SGRGFGDGYN GYGGGPGGGN ENSBTAP00000007527/1-341 -RGGGGNFGP GP--GSNFRG GSD----GYG SGRGFGDGYN GYGGGPGGGN 351 400 bmy_15252T0/1-364 IELLPIYHGI DMNHG----- ---------- --QVYSAATK TVKCFISTAE BACU005758/1-354 LGVSPGYGGG RGGYGG---G YGNQDGSSRA GYDNYGRRNY GSQNYSDSEN ENSP00000346694/1-353 FGGSPGYGGG RGGYGGGGPG YGNQGGGYGG GYDNYGGGNY GSGNYNDFGN ENSTTRP00000000667/1-413 FGGSPGYGGG RGGYGGGGPG YGNQGGGYGG GYDNYGGGNY GSGNYNDFGN ENSBTAP00000007527/1-341 FGGSPGYGGG RGGYGGGGPG YGNQGGGYGG GYDNYGGGNY GSGNYNDFGN 401 450 bmy_15252T0/1-364 ASQVIINKAF L--GSFSGV- ---GSEMEGV LLQVTNEEVV NHRIFKK- BACU005758/1-354 YKQKPSKYEL LKSGKLSGSR NMGGSYSGGN YGQRGSGGRG GY-GQTR- ENSP00000346694/1-353 YNQQPSNYGP MKSGNFGGSR NMGGPYGGGN YGPGGSGGSG GYGGRSRY ENSTTRP00000000667/1-413 YNQQPSNYGP MKSGNFGGSR NMGGPYGGGN YGPGGSGGSG GYGGRSRY ENSBTAP00000007527/1-341 YNQQPSNYGP MKSGNFGGSR NMGGPYGGGN YGPGGSGGSG GYGGRSRY