KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:16 2014 Check: 00 .. Name: ENSTTRP00000003341/1-454 Len: 497 Check: 5667 Weight: 1.00 Name: ENSP00000380184/1-456 Len: 497 Check: 1293 Weight: 1.00 Name: ENSBTAP00000007532/1-456 Len: 497 Check: 2151 Weight: 1.00 Name: bmy_09726T0/1-396 Len: 497 Check: 1759 Weight: 1.00 Name: BACU009417/1-467 Len: 497 Check: 9091 Weight: 1.00 // 1 50 ENSTTRP00000003341/1-454 MFLLLPFDSL IVSLLGISLT VLFTLLLVFI IAPAIFGVSF GIRKLYMKTL ENSP00000380184/1-456 MFLLLPFDSL IVNLLGISLT VLFTLLLVFI IVPAIFGVSF GIRKLYMKSL ENSBTAP00000007532/1-456 MFLLLPFDSL IVSLLGISLT VLFTLLLVFI IVPAVFGVSF GIRKLYMKTL bmy_09726T0/1-396 MFLLLPFDSL IVSLLGISLT VLFTLLLVFI IVPAVFGVSF GIRKLYMKTL BACU009417/1-467 MLLLLPFDSL IVSLLGISLT VLFTLLLVFI IVPAVFGVSF GIRKLYMKTL 51 100 ENSTTRP00000003341/1-454 LKIFAWATLR MERGAKEKNH QLYKPYTNGI IAKDPTSLEE EIKEIRRSGS ENSP00000380184/1-456 LKIFAWATLR MERGAKEKNH QLYKPYTNGI IAKDPTSLEE EIKEIRRSGS ENSBTAP00000007532/1-456 LKIFAWATLR MERGAKEKNH QLYKPYTNGI IAKDPTSLEE EIKEIRRSGS bmy_09726T0/1-396 LKIFAWATLR MERGAKEKNH QLYKPYTNGI IAKDPTSLEE EIKEIRRSGS BACU009417/1-467 LKIFAWATLR MERGAKEKNH QLYKPYTNGI IAKDPTSLEE EIKEIRRSGS 101 150 ENSTTRP00000003341/1-454 SKALDNTREF ELSDIFYFCR KGMETIMDDE VTKRFSAEEL ESWNLLSRTN ENSP00000380184/1-456 SKALDNTPEF ELSDIFYFCR KGMETIMDDE VTKRFSAEEL ESWNLLSRTN ENSBTAP00000007532/1-456 SKALDNTPEF ELSDIFYFCR KGMETIMDDE VTKRFSAEEL ESWNLLSRTN bmy_09726T0/1-396 SKALDNTLEF ELSDIFYFCR KGVETIMDDE VTKRFSAEEL ESWNLLSRTN BACU009417/1-467 SKALDNTLEF ELSDIFYFCR KGVETIMDDE VTKRFSAEEL ESWNLLSRTN 151 200 ENSTTRP00000003341/1-454 YNFQYISLRL TVLWGLGVLI RYCFLLPLRI ALAFTGISLL VVGTTVVGYL ENSP00000380184/1-456 YNFQYISLRL TVLWGLGVLI RYCFLLPLRI ALAFTGISLL VVGTTVVGYL ENSBTAP00000007532/1-456 YNFQYISLRL TVLWGLGVLI RYCLLLPLRI ALAFTGISLL VVGTTMVGYL bmy_09726T0/1-396 YNFQYISLRL TVLWGLGVLI RYCFLLPLRI ALAFTGISLL VVGTTVVGYL BACU009417/1-467 YNFQYISLRL TVLWGLGVLI RYCFLLPLRI ALAFTGISLL VVGTTVVGYL 201 250 ENSTTRP00000003341/1-454 PNG------- ---------- ---------- ---RFKEFLS KHVHLMCYRI ENSP00000380184/1-456 PNG------- ---------- ---------- ---RFKEFMS KHVHLMCYRI ENSBTAP00000007532/1-456 PNG------- ---------- ---------- ---RFKEFLS KHVHLMCYRI bmy_09726T0/1-396 PNGREIGSFW EVMGLANLSF ARAVGEKSLS CCRRFKEFLS KHVHLMCYRI BACU009417/1-467 PNG------- ---------- ---------- ---RFKEFLS KHVHLMCYRI 251 300 ENSTTRP00000003341/1-454 CVRALTAIIT YHDRKNRPRN GGICVANHTS PIDVIILASD GYYAMVGQVH ENSP00000380184/1-456 CVRALTAIIT YHDRENRPRN GGICVANHTS PIDVIILASD GYYAMVGQVH ENSBTAP00000007532/1-456 CVRALTAIIT YHDRKNRPRN GGICVANHTS PIDVIILASD GYYAMVGQVH bmy_09726T0/1-396 CVRALTAIIT YHDRKNRPRN GGICVANHTS PIDVIILASD GYYAMVGQVH BACU009417/1-467 CVRALTAIIT YHDRKNRPRN GGICVANHTS PIDVIILASD GYYAMVGQVH 301 350 ENSTTRP00000003341/1-454 GGLMGVIQRA MVKACPHVWF ERSEVKDRHL VAKRLTEHVQ DKSKLPILIF ENSP00000380184/1-456 GGLMGVIQRA MVKACPHVWF ERSEVKDRHL VAKRLTEHVQ DKSKLPILIF ENSBTAP00000007532/1-456 GGLMGVIQRA MVKACPHVWF ERSEVKDRHL VARRLTEHVQ DKSKLPILIF bmy_09726T0/1-396 GGLMGVIQRA MVKACPHVWF ERSEVKDRHL VAKRLTEHVQ DKSKLPILIF BACU009417/1-467 GGLMGVIQRA MVKACPHVWF ERSEVKDRHL VAKRLTEHVQ DKSKLPILIF 351 400 ENSTTRP00000003341/1-454 P--------- --EXXXXXXX XXXXXXXXXX XXXXXXXXXX XXYDPQFGDA ENSP00000380184/1-456 P--------- --EGTCINNT SVMMFKKGSF EIGATVYPVA IKYDPQFGDA ENSBTAP00000007532/1-456 P--------- --EGTCINNT SVMMFKKGSF EIGATVYPVA IKYDPQFGDA bmy_09726T0/1-396 PEGKRLCGEA VQEGTCINNT SVMMFKKGSF EIGATVYPVA IK-------- BACU009417/1-467 PEGKRLCGEA VQEGTCINNT SVMMFKKGSF EIGATVYPVA IKYDPQFGDA 401 450 ENSTTRP00000003341/1-454 FWDSSKY-MV TYLL-MMTSW VIVCSVWYLX XXXXXXXXXX XXXXXXXXXX ENSP00000380184/1-456 FWNSSKYGMV TYLLRMMTSW AIVCSVWYLP PMTREADEDA VQFANRVKSA ENSBTAP00000007532/1-456 FWNSSKYGMV TYLLRMMTSW AIVCSVWYLP PMTRQAEEDA VQFANRVKSA bmy_09726T0/1-396 ---------- ---VRAL--- ---------- ---------- ---------- BACU009417/1-467 FWNSSKYGMV TYLLRMMTSW AIVCSVWYLP PMTREAEEDA VQFANRVKSA 451 500 ENSTTRP00000003341/1-454 XXXXXXXXXX XXDGGLKREK VKDTFKEEQQ KLYSKMIAGN HEDRSRS ENSP00000380184/1-456 IARQGGLVDL LWDGGLKREK VKDTFKEEQQ KLYSKMIVGN HKDRSRS ENSBTAP00000007532/1-456 IARQGGLVDL LWDGGLKREK VKDTFKEEQQ KLYSKMIVGN HEDRSRS bmy_09726T0/1-396 ---------- ---------- ---------- ---------- ------- BACU009417/1-467 IARQGGLVDL LWDGGLKREK VKDTFKEEQQ KLYSKMIVGN HEDRSRS