KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:17 2014 Check: 00 .. Name: ENSP00000269216/1-595 Len: 650 Check: 3246 Weight: 1.00 Name: ENSBTAP00000007537/1-350 Len: 650 Check: 146 Weight: 1.00 Name: BACU017864/1-282 Len: 650 Check: 8014 Weight: 1.00 Name: bmy_20878T0/1-594 Len: 650 Check: 9959 Weight: 1.00 Name: ENSTTRP00000012663/1-592 Len: 650 Check: 6409 Weight: 1.00 // 1 50 ENSP00000269216/1-595 MALTDGGWCL PKRFGAAGAD ASDSRAFPAR EPSTPPSPIS SSSSS-CSRG ENSBTAP00000007537/1-350 -----GG--- ---------- ---------- ---------- ---------- BACU017864/1-282 MALTDGGWCL PKRFGAAPAD ASDSGAFPAR EPSTPPSPRA SSSSSCCSRG bmy_20878T0/1-594 MALTDGGWCL PKRFGAAPAD ASDSGAFXAR EPSTPPSPIS SSSSSCCSRG ENSTTRP00000012663/1-592 MALTDGGWCL PKRFGAAPAD ASDSGAFPAR EPSTPPSPIS SSSSSCCSRG 51 100 ENSP00000269216/1-595 GERGPGGASN CGTPQLDTEA AAGPPARSLL LSSYASHPFG APHGPSAPGV ENSBTAP00000007537/1-350 GREGPGSA-- ---------- ---------- ---------- ---------- BACU017864/1-282 GERGPGGASN CRTPQLDTEA AAGPTARSLL LSPYASHPFG APHGPSAPGI bmy_20878T0/1-594 GERGPGGASN CRTPQLDTEA AAGPTARSLL LSPYASHPFG APHGPSAPGI ENSTTRP00000012663/1-592 GERGPGGASN CRTPQLDREA AAGPTARSLL LSPYASHPFG APHGPSAPGI 101 150 ENSP00000269216/1-595 AGPGGNLSSW EDLLLFTDLD QAATASKLLW SSRGAKLSPF APEQPEEMYQ ENSBTAP00000007537/1-350 ---------- ---------- ---------- ---------- ---------- BACU017864/1-282 SGPGGALSSW EDLLLFTDLD QAATASKLLW SSRGAKLSPF APEQPEEMYQ bmy_20878T0/1-594 SGPGGALSSW EDLLLFTDLD QAATASKLLW SSRGAKLSPF APEQPEEMYQ ENSTTRP00000012663/1-592 SGPGGALSSW EDLLLFTDLD QAATASKLLW SSRGAKLSPF APEQPEEMYQ 151 200 ENSP00000269216/1-595 TLAALSSQGP AAYDGAPGGF VHSAAAAAAA AAAASSPVYV PTTRVGSMLP ENSBTAP00000007537/1-350 ---------- ---------- ---------- ---------- ---------- BACU017864/1-282 TLAALSSQGP AAYDGAPGGF ---------- ---------- ---------- bmy_20878T0/1-594 TLAALSSQGP AAYDGAPGGF VHSAAAAAAA AAAASSPVYV PTTRVGSMLP ENSTTRP00000012663/1-592 TLAALSSQGP AAYDGAPGGF VHSAAAAAAA AAAASSPVYV PTTRVGSMLP 201 250 ENSP00000269216/1-595 GLPYHLQGSG SGPANHAGGA GAHPGWPQAS ADSPPYGSGG GAAGGGAAGP ENSBTAP00000007537/1-350 ---------- ---------- ---------- ---------- ---------- BACU017864/1-282 ---------- ---------- ---------- ---------- ---------- bmy_20878T0/1-594 GLPY-LQGAG GGPANHAGGA GAHPGWPQAS ADSPPYGSGG GAAAGGAAGP ENSTTRP00000012663/1-592 GLPY-LQGAG GGPANHAGGA GAHPGWPQAS ADSPPYGSGG GAAAGGAAGP 251 300 ENSP00000269216/1-595 GGAGSAAAHV SARFPYSPSP PMANGAAREP GGYAAAGSGG AGGVSGGGSS ENSBTAP00000007537/1-350 ---GSAAAHV SARFPYSPSP PMANGAARDP GGYAAAGGGA AGGVSGGGSG BACU017864/1-282 ---------- ---------- ---------- ---------- ---------- bmy_20878T0/1-594 GSASSAAAHV SARFPYSPSP PMANGAARDP GGYAAAGGGG AGGVSGGGGS ENSTTRP00000012663/1-592 GSASSAAAHV SARFPYSPSP LMANGAARDP GGYAAAGGGG AGGVSGGGGS 301 350 ENSP00000269216/1-595 LAAMGGREPQ YSSLSAARPL NGTYHHHHHH HHHHPSPYSP YVGAPLTPAW ENSBTAP00000007537/1-350 LAAMGGREHQ YGSLSAARPL NGTY---HFH HHHHPSAYSP YVGAPLTPAW BACU017864/1-282 ---------- ---------- ---------- ---------- ---------- bmy_20878T0/1-594 LAAMGGREHQ YGSLSAARPL NGTY---HHH HHHHPSAYSP YVGAPLTPAW ENSTTRP00000012663/1-592 LAAMGGREHQ YGSLSAARPL NGTY---HHH HHHHPSAYSP YVGAPLTPAW 351 400 ENSP00000269216/1-595 PAGPFETPVL HSLQSRAGAP LPVPRGPSAD LLEDLSESRE CVNCGSIQTP ENSBTAP00000007537/1-350 PAGPFETPVL HSLQSRAGAP LPVPRGPGTD LLEDLPESRE CVNCGSIQTP BACU017864/1-282 ---------- ---------- ---------- ---------- ---------- bmy_20878T0/1-594 PAGPFETPVL HSLQSRAGAP LPVPRGPSAD LLEDLPESRE CVNCGSIQTP ENSTTRP00000012663/1-592 PAGPFETPVL HSLQSRAGAP LPVPRGPSAD LLEDLPESRE CVNCGSIQTP 401 450 ENSP00000269216/1-595 LWRRDGTGHY LCNACGLYSK MNGLSRPLIK PQKR------ ---------- ENSBTAP00000007537/1-350 LWRRDGTGHY LCNACGLYSK MNGLSRPLIK PQKR------ ---------- BACU017864/1-282 ---------- ---------- ---------- ---------- ---------- bmy_20878T0/1-594 LWRRDGTGHY LCNACGLYSK MNGLSRPLIK PQKRVVSASA ALPCGPAPSG ENSTTRP00000012663/1-592 LWRRDGTGHY LCNACGLYSK MNGLSRPLIK PQKR------ ---------- 451 500 ENSP00000269216/1-595 ---------- ---------- ---------- --------VP SSRRLGLSCA ENSBTAP00000007537/1-350 ---------- ---------- ---------- --------VP SSRRLGLSCA BACU017864/1-282 ---------- ---------- ---------- ---------P SSRRLGLSCA bmy_20878T0/1-594 ALPMGPGSPR RAPPGRTCPR GGTRGGPSAG PSGTPGSPVP SSRRLGLSCA ENSTTRP00000012663/1-592 ---------- ---------- ---------- --------VP SSRRLGLSCA 501 550 ENSP00000269216/1-595 NCHTTTTTLW RRNAEGEPVC NACGLYMKLH GVPRPLAMKK EGIQTRKRKP ENSBTAP00000007537/1-350 NCHTTTTTLW RRNAEGEPVC NACGLYMKLH GVPRPLAMKK EGIQTRKRKP BACU017864/1-282 NCHTTTTTLW RRNAEGEPVC NACGLYMKLH GVPRPLAMKK EGIQTRKRKP bmy_20878T0/1-594 NCHTTTTTLW RRNAEGEPVC NACGLYMKLH GVPRPLAMKK EGIQTRKRKP ENSTTRP00000012663/1-592 NCHTTTTTLW RRNAEGEPVC NACGLYMKLH GVPRPLAMKK EGIQTRKRKP 551 600 ENSP00000269216/1-595 KNINKSKTCS GNSNNSIPMT PTSTSSNSDD CSKNTSPTTQ PTASGAGAPV ENSBTAP00000007537/1-350 KNINKSKACS GNSNNSVPMT PTSTSSNADD CSKNTSPTTQ PAASGAGGSV BACU017864/1-282 KNINKSKACS GNSNNSVPMT PTSTSSNSDD CSKNTSPTTQ PTAS------ bmy_20878T0/1-594 KNINKSKACS GNSNNSVPMT PTSTSSNSDD CSKNTSPTTQ PTAS------ ENSTTRP00000012663/1-592 KNINKSKACS GNSNTSVPMT PTSTSSNSDD CSKNTSPTTQ PTASGAGASV 601 650 ENSP00000269216/1-595 MTGAGESTNP ENSELKYSGQ DGLYIGVSLA SPAEVTSSVR PDSWCALALA ENSBTAP00000007537/1-350 MSGAGDSANP ENSELKYSGQ DGLYIGVSLA SPAEVTSSVR QDSWCALALA BACU017864/1-282 ---------- ---------- -GVSVKTV-- ---------- ---------- bmy_20878T0/1-594 ---------- ---------- -GVFI----- ---------- ---------- ENSTTRP00000012663/1-592 MSGAGESANP ENSELKYSGQ DGLYIGVSLA SPAEVTSSVR QDSWCALALA