KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:21 2014 Check: 00 .. Name: ENSP00000221543/1-648 Len: 661 Check: 86 Weight: 1.00 Name: ENSBTAP00000007578/1-652 Len: 661 Check: 6230 Weight: 1.00 Name: ENSTTRP00000014171/1-648 Len: 661 Check: 9239 Weight: 1.00 Name: bmy_06359T0/1-659 Len: 661 Check: 8017 Weight: 1.00 Name: BACU011064/1-650 Len: 661 Check: 2774 Weight: 1.00 // 1 50 ENSP00000221543/1-648 MEGAGYRVVF EKGGVYLHTS AKKYQDRDSL IAGVIRVVEK DNDVLLHWAP ENSBTAP00000007578/1-652 MEGAGYRVVF EKGGVYLHTS AKKHQDPDSL IAGVIRVVEK DNDVLLHWAP ENSTTRP00000014171/1-648 MEGAGYRVVF EKGGVYLHTS AKKHQDPDSL IAGVIRVVEK DNDVLLHWAP bmy_06359T0/1-659 MEGAGYRVVF EKGGVYLHTS AKKHQDPDSL IAGVIRVVEK DNDVLLHWAP BACU011064/1-650 MEGAGYRVVF EKGGVYLHTS AKKHQDPDSL IAGVIRVVEK DNDVLLHWAP 51 100 ENSP00000221543/1-648 VEEAGDSTQI LFSKKDSSGG DSCASEEEPT FDPDYEPDWA VISTVRPQLC ENSBTAP00000007578/1-652 IEEAGDSSQI FFSKKDTSGG DSCTSEEEPT FDPGYEPDWA VISTVRPRPR ENSTTRP00000014171/1-648 VEEAGDSTQI FFSKKDTSGG DSCTSEEEPT FDPGYEPDWA VISTVRPRHR bmy_06359T0/1-659 VEEAGDSTQI FFSKKDTSGG DSCTSEEEPT FDPGYEPDWA VISTVRPRPR BACU011064/1-650 VEEAGDSTQI FFSKKDTSGG DSCTSEEEPT FDPGYEPDWA VISTVWPRPR 101 150 ENSP00000221543/1-648 HSEPTRGAEP SCPQGSWAFS VSLGELKSIR RSKPGLSWAY LVLVTQAGGS ENSBTAP00000007578/1-652 HSEPKRGAEP SSPRGSWAFS VSLGELRSIR RSKPGLSWAY LVLVTQAGGS ENSTTRP00000014171/1-648 HSEPTRGAEP SSPRGSWAFS VSLGELKSIR RSKPGLSWAY LVLVTQAGGS bmy_06359T0/1-659 HSEPTRGAEP SSPRGSWAFS VSLGELKSIR RSKPGLSWAY LVLVTQAGGS BACU011064/1-650 HSEPTRGAEP SSPRGSWAFS VSLGELKSIR RSKPGLSWAY LVLVTQAGGS 151 200 ENSP00000221543/1-648 LPALHFHRGG TRALLRVLSR YLLLASSPQD SRLYLVFPHD SSALSNSFHH ENSBTAP00000007578/1-652 LPALHFHRGG TRALLRVLSR YLLLASSPQD SRLYLVFPHD SSALSSSFHH ENSTTRP00000014171/1-648 LPALHFHRGG TRALLRVLSR YLLLASSPQD SRLYLVFPHD SSALSNSFHH bmy_06359T0/1-659 LPALHFHRGG TRALLRVLSR YLLLASSPQD SRLYLVFPHD SSALSNSFHH BACU011064/1-650 LPALHFHRGG TRALLRVLSR YLLLASSPQD SRLYLVFPHD SSALSSSFHH 201 250 ENSP00000221543/1-648 LQLFDQDSSN VVSRFLQDPY STTFSSFSRV TNFFRGALQP QPEGAASDLP ENSBTAP00000007578/1-652 LQLFDQDSSN VVSRFLQDPY STTFSSFSRV TNFFRGALQP HLEGTSPDLP ENSTTRP00000014171/1-648 LQLFDQDSSN VVSRFFQDPY STTFSSFSRV TNFFRGALQP HQEGASPDLP bmy_06359T0/1-659 LQLFDQDSSN VVSRFLQDPY STTFSSFSRV TNFFRGALQP HQEGASPDLP BACU011064/1-650 LQLFDQDSSN VVSRFLQGPS STTFSSFSRV TNFFRGALQP HQEGASPDLP 251 300 ENSP00000221543/1-648 PPPDDEPEPG FEVISCVELG PRPTVERGPP VTEEEWARHV GPEGRLQQVP ENSBTAP00000007578/1-652 PAPDDEPEPG FEVISCVELG PRPAVERAPP VTEEEWASHV GPEGRLQRVP ENSTTRP00000014171/1-648 PAPDDEPEPG FEVISCVELG PRPAVERAPP VTEEEWARRM GPEGRLQQVP bmy_06359T0/1-659 PGPDDEPEPG FEVISCVELG PRPAVERAPP VTEEEWACHV GPEGRLQQVP BACU011064/1-650 PGPDDEPEPG FEVISCVELG PRPAVERAPP VTEEEWARHV GPEGRLQQVP 301 350 ENSP00000221543/1-648 ELKNRIFSGG LSPSLRREAW KFLLGYLSWE GTAEEHKAHI RKKTDEYFRM ENSBTAP00000007578/1-652 ELKARIFSGG LSPSLRREAW KFLLGYLSWE GSMEEHKAHV RKKTDEYFRM ENSTTRP00000014171/1-648 ELKARIFSGG LSPSLRREAW KFLLGYLSWE GSAEEHKAHV RKKTDEYFRM bmy_06359T0/1-659 ELKARIFSGG LSPSLRREAW KFLLGYLSWE GSAEEHKAHV RKKTDEYFRM BACU011064/1-650 ELKARIFSGG LSPSLRREAW KFLLGYLSWE GSAEEHKAHV RKKTDEYFRM 351 400 ENSP00000221543/1-648 KLQWKSVSPE QERRNSLLHG YRSLIERDVS RTDRTNKFYE GPENPGLGLL ENSBTAP00000007578/1-652 KLQWKSVSPE QERRNSLLHG YRSLIERDVS RTDRTNKFYE GPENPGLGLL ENSTTRP00000014171/1-648 KLQWKSVSPE QERRNSLLHG YRSLIERDVS RTDRNNKFYE GPENPGLGLL bmy_06359T0/1-659 KLQWKSVSPE QERRNSLLHG YRSLIERDVS RTDRTNKFYE GPENPGLGLL BACU011064/1-650 KLQWKSVSPE QERRNSLLHG YRSLIERDVS RTDRTNKFYE GPENPGLGPL 401 450 ENSP00000221543/1-648 NDILLTYCMY HFDLGYVQGM SDLLSPILYV IQNEVDAFWC FCGFMELVQG ENSBTAP00000007578/1-652 NDILLTYCMY HFDLGYVQGM SDLLSPILYV TQNEVDAFWC FCGFMELVHG ENSTTRP00000014171/1-648 NDILLTYCMY HFDLGYVQGM SDLLSPILYV TQNEVDAFWC FCGFMELVHG bmy_06359T0/1-659 NDILLTYCMY HFDLGYVQGM SDLLSPILYV TQNEVDAFWC FCGFMELVHG BACU011064/1-650 NDILLTYCMY HFDLGYVQGM SDLLSPILYV TQNEVDAFWC FCGFMELVHG 451 500 ENSP00000221543/1-648 NFEESQETMK RQLGRLLLLL RVLDPLLCDF LDSQDSGSLC FCFRWLLIWF ENSBTAP00000007578/1-652 NFEESQETMK RQLGQLLLLL RVLDPPLCDF LDSQDSGSLC FCFRWLLIWF ENSTTRP00000014171/1-648 NFEESQETMK RQLGQLLLLL RVLDPPLCDF LDSQDSGSLC FCFRWLLIWF bmy_06359T0/1-659 NFEESQETMK RQLGQLLLLL RVLDPPLCDF LDSQDSGSLC FCFRWLLIWF BACU011064/1-650 NFEESQETMK RQLGQLLLLL RVLDPPLCDF LDSQDSGSLC FCFRWLLIWF 501 550 ENSP00000221543/1-648 KREFPFPDVL RLWEVLWTGL PGPNLHLLVA CAILDMERDT LMLSGFGSNE ENSBTAP00000007578/1-652 KREFPFPDVL RLWEVLWTGL PGPNLHLLVA CAILDMERDT LMLSGFGSNE ENSTTRP00000014171/1-648 KREFPFPDVL RLWEVLWTGL PGPNLHLLVA CAILDMERDT LMLSGFGSNE bmy_06359T0/1-659 KREFPFPDVL RLWEVLWTGL PGPSLHLLVA CAILDMERDT LMLSGFGSNE BACU011064/1-650 KREFPFPDVL RLWEVLWTGL PGPSLHLLVA CAILDMERDT LMLSGFGSNE 551 600 ENSP00000221543/1-648 ILKHINELTM KLSVEDVLTR AEALHRQLTA CPELPHNVQE ILGLAPPAEP ENSBTAP00000007578/1-652 ILKHINELTM KLSVEDVLTR AEALYRQLTA CGELPHNVQE VLGLASPAEP ENSTTRP00000014171/1-648 ILKHINELTM KLSVEDVLTR AEALYRQLTA CRELPHNVQE ILGLAPPAEP bmy_06359T0/1-659 ILKHINELTM KLSVEDVLMR AEALYRQLTS CRELPHNVQE ILGLAPPAEP BACU011064/1-650 ILKHINELTM KLSVEDVLTR AEALYRQLTS CRELPHNVQE ILGLAPPAEP 601 650 ENSP00000221543/1-648 HSPSPTASPL PLSPTRAPPT PPPSTD--TA PQPDSSLEIL P--------- ENSBTAP00000007578/1-652 QSPSPSASPL PLSPTRAPPA PLPPADTATA TQPDSSLEIL P--------- ENSTTRP00000014171/1-648 QSPSPPASPL PLSPTRAPPA PPPPVD--TV PQPDSSLEIL P--------- bmy_06359T0/1-659 QSPSPPASPL PLSPTGAPPA PPPAAD--TV PQADSSLEIL PEEEEEEEEE BACU011064/1-650 QSPSPPASPL PLSPTRAPPA PPPPAD--TV PQPDSSLEIL P--------- 651 700 ENSP00000221543/1-648 --EEEDEGAD S ENSBTAP00000007578/1-652 EEEDDEEGVE S ENSTTRP00000014171/1-648 --EEEEEGAD S bmy_06359T0/1-659 EEEEEEECAD S BACU011064/1-650 EEEEEEECAD S