KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:21 2014 Check: 00 .. Name: ENSP00000472474/1-589 Len: 604 Check: 1996 Weight: 1.00 Name: ENSBTAP00000007580/1-586 Len: 604 Check: 134 Weight: 1.00 Name: ENSTTRP00000014177/1-582 Len: 604 Check: 5457 Weight: 1.00 Name: bmy_06358T0/1-551 Len: 604 Check: 5478 Weight: 1.00 Name: BACU011063/1-560 Len: 604 Check: 8790 Weight: 1.00 // 1 50 ENSP00000472474/1-589 MPNDDFCPGL TIKAMGAERA PQRQPCTLHL LVLVPILLSL VASQDWKAER ENSBTAP00000007580/1-586 SPDDDVRPGL TRKAMGTERA CQSQPCTWRL LALVPVFLSL AASLDWQTAH ENSTTRP00000014177/1-582 MPNDDFCPGL TRKAMGAERA RQSQPCSWRL LALVPILLSL AASLDRQTAQ bmy_06358T0/1-551 ---------- ----MGAERA HQSQPCTWRL LALVPVLLSL AASLDWQTAQ BACU011063/1-560 ---------- ---------- --MHSLAWRL LALVPVLLSL AASLDWQTAQ 51 100 ENSP00000472474/1-589 SQDPFEKCMQ DPDYEQLLKV VTWGLNRTLK PQRVIVVGAG VAGLVAAKVL ENSBTAP00000007580/1-586 IYDPFEKCMH DPDYEQLLKV VTLGLNRTLN PRRVVVVGAG VAGLVAAKVL ENSTTRP00000014177/1-582 SRDPFEKCMR DPDYEQLLRV LTL-LNRTSK PQRT-VVGAG V-GLLAAKVL bmy_06358T0/1-551 SHDPFEKCTQ DPDYEQLLRV VTLGLNRTSK PRRVVVVGAG VAGLLAAKVL BACU011063/1-560 SHDPFEKCMQ DPDYEQLLRV VTLGLNRTSK PRRVVVVGAG VAGLLAAKVL 101 150 ENSP00000472474/1-589 SDAGHKVTIL EADNRIGGRI FTYRDQNTGW IGELGAMRMP SSHRILHKLC ENSBTAP00000007580/1-586 SDAGHKVTIL EADSRIGGRI LTYRDRKTGW IGELGAMRMP SSHRILHELC ENSTTRP00000014177/1-582 SDAGHKVTIL EADNRIGGRI FTYRDRKTGW IGELGAMRMP SSHRILHALC bmy_06358T0/1-551 SDAGHKVTIL EADNRIGGRI FTYRDRKTGW NGELGAMRMP SSHRILHELC BACU011063/1-560 SDAGHKVTIL EADNRIGGRI FTYRDRKTGW IGELGAMRMP SSHRILHELC 151 200 ENSP00000472474/1-589 QGLGLNLTKF TQYDKNTWTE VHEVKLRNYV VEKVPEKLGY ALRPQEKGHS ENSBTAP00000007580/1-586 KSLGLNLTKF TQYDENTWTE VNEVKLRNYV VEKMPEKLGY KLSPKEKGRS ENSTTRP00000014177/1-582 KSLGLNLTKF TQYDENTWTE VHEVKLRNYV VEKMPEKLGY KLHPKEKGHS bmy_06358T0/1-551 KSLGLNLTKF TQYDENTWTE VNEVKLRNYV VEKMPEKLGY KLHPKEKGHS BACU011063/1-560 KSLGLNLTKF TQYDENTWTE VHEVKLRNYV VEKMPEKLGY KLHPKEKGHS 201 250 ENSP00000472474/1-589 PEDIYQMALN QALKDLKALG CRKAMKKFER HTLLEYLLGE GNLSRPAVQL ENSBTAP00000007580/1-586 PEEIYQMALN RAIKDLRTLG CKKAMMKFER HTLLEYLLGE GNLSQPAVRL ENSTTRP00000014177/1-582 PEEIYQMALN RAIEDLRTLG CRKAMMKFER HTLLEYLLGE GNLSQPAVRL bmy_06358T0/1-551 PEEIYQMALN R--------- ---------- ----EYLLGE GNLSQPAVRL BACU011063/1-560 PEEIYQMALN RAIKDLRTLG CRKAMMKFER HTLLEYLLGE GNLSQPAVQL 251 300 ENSP00000472474/1-589 LGDVMSEDGF FYLSFAEALR AHSCLSDRLQ YSRIVGGWDL LPRALLSSLS ENSBTAP00000007580/1-586 LGDVMSKDGF FYLSFAEALR AHSCLSDRLR YSRIVGGWDL LPRALLSSLS ENSTTRP00000014177/1-582 LGDVMSKDGF FYLNFAEALR AHSCLSDRLR YSRIAGGWDL LPRALLSSLS bmy_06358T0/1-551 LGDVMSKDGF FYLSFAEALR AHSCLSDRLR YSRIVGGWDL LPRALLSSLS BACU011063/1-560 LGDVMSKDGF FYLSFAEALR AHSCLSDRLR YSRIMGGWDL LPRALLSSLS 301 350 ENSP00000472474/1-589 GLVLLNAPVV AMTQGPHDVH VQIETSPPAR NLKVLKADVV LLTASGPAVK ENSBTAP00000007580/1-586 GPVLLHAPVV AIKQGTHEVK VHIKPSRRTR NLKSMMADVV LLTVSGPALQ ENSTTRP00000014177/1-582 GPVLLHTPVV AIKQGTHEVS VYFEPSRRAR NQKSLTADVV LLTVSGPALQ bmy_06358T0/1-551 GTVLLHSPVV AIKQGTHEVS VHIEASSRAR NLKSLTADVV LLTVSGPALQ BACU011063/1-560 GPVLLHSPVV AIKQGTHEVS VHIEASRRAP NLKSLTADVV LLTVSGPALQ 351 400 ENSP00000472474/1-589 RITFSPPLPR HMQEALRRLH YVPATKVFLS FRRPFWREEH IEGGHSNTDR ENSBTAP00000007580/1-586 RIAFTPPLTR RRQEAVRGLH YVPATKVFLS FRRPFWHDEH IEGGHSSTDR ENSTTRP00000014177/1-582 RITFTPPLTL KWQEAVRALH YMPATKVFLS FRRPFWHDEH IEGGHSNTDR bmy_06358T0/1-551 RITFTPPLTR KRQEAVRALH YVPATKVLLS FRRPFWHDEH IEGGHSSTDR BACU011063/1-560 RITFTPPLTR KRQEAVRALH YVPATKVFLS FRRPFWHDEH IEGGHSNTDR 401 450 ENSP00000472474/1-589 PSRMIFYPPP REGALLLASY TWSDAAAAFA GLSREEALRL ALDDVAALHG ENSBTAP00000007580/1-586 PSRVIFYPAP GDGALLLASY TWSDAAAPFA GRSLAESLRL ALDDVAALHG ENSTTRP00000014177/1-582 PSRVIFYPPP GEGALLLASY TWSDAAATFA GLSLSEALRL ALDDVAALHG bmy_06358T0/1-551 PSRVIFYPPP GEGALLLASY TWSDAAATFA GLSLSEALRL ALDDVAALHG BACU011063/1-560 PSRVIFYPPP GEGALLLASY TWSDAAATFA GLSLSEALRL ALDDVAALHG 451 500 ENSP00000472474/1-589 PVVRQLWDGT GVVKRWAEDQ HSQGGFVVQP PALWQTEKD- ----DWTVPY ENSBTAP00000007580/1-586 PIAYRLWDGT GIIKRWAEDP HSQGGFVVQP PTLFQTDKDE GREFDWSVPY ENSTTRP00000014177/1-582 PIVYRLWDGS GIVKRWAEDP HSQGGFVVQP PMLWRTDKDE DQEYDWAVPH bmy_06358T0/1-551 PIVYRLWDGS GIVKRWAEDP HSQGGFVVQP PMLWRTDKDE GQEHDWAVPY BACU011063/1-560 PIVYRLWDGS GIVKRWAEDP HSQGGFVVQP PMLWRTDKDE GQEHDWAAPY 501 550 ENSP00000472474/1-589 GRIYFAGEHT AYPHGWVETA VKSALRAAIK INSR---KGP ASDTASPEGH ENSBTAP00000007580/1-586 GRIYFAGEHT AYPHGWVETA VKSALRAAIL INSRISGSGS SSSLKEP--- ENSTTRP00000014177/1-582 GRIYFAGEHT AYPHGWVETA VKSALRAAVL IN------GR PAAGTTP--- bmy_06358T0/1-551 GCIYFAGEHT AYPHGWVETA VKSALRAAVL IN------GR TSSWNDL--- BACU011063/1-560 GCIYFAGEHT AYPHGWVETA VKSALRAAVL IN------GR TSSWNDP--- 551 600 ENSP00000472474/1-589 ASDMEGQGHV HGVAS----- --SPSHDLAK EEGSHPPVQG QLSLQNTTHT ENSBTAP00000007580/1-586 -RIVNKVGHG HLTPSHHQHH HHHHRCPFES GQGTHSPASH ---------- ENSTTRP00000014177/1-582 ---INSMGHV HVAPA----- -HHHPRSLER GRGTHSPALH PSPL-HTTQK bmy_06358T0/1-551 -RTINSMGHV HVAPA----- -HHHPCSLER GRGTHSPALH AVTAPHTTQK BACU011063/1-560 -RTINSMGRV HVAPA----- -HHHPCSLER GRGTHSPALH AVTAPHTT-- 601 650 ENSP00000472474/1-589 RTSH ENSBTAP00000007580/1-586 ---- ENSTTRP00000014177/1-582 RTEY bmy_06358T0/1-551 RTQY BACU011063/1-560 ----