KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:32:24 2014 Check: 00 .. Name: ENSP00000256362/1-702 Len: 716 Check: 9359 Weight: 1.00 Name: ENSBTAP00000007588/1-700 Len: 716 Check: 5331 Weight: 1.00 Name: bmy_10180T0/1-713 Len: 716 Check: 6266 Weight: 1.00 Name: BACU010808/1-713 Len: 716 Check: 7365 Weight: 1.00 // 1 50 ENSP00000256362/1-702 MTSRNQLVQK VLQELQEAVE CEGLEGLIGA SLEAKQVLSS FTLPTCREGG ENSBTAP00000007588/1-700 MTSREQLVQH VLQELQEAVE SEGLEGLVGA ALEAKQVLSS FALPTRRGGG bmy_10180T0/1-713 MTSREQLVQQ VLQELQEAVE SEGLEGLVGA ALEAKQVLSS FALPTGREGG BACU010808/1-713 MTSREQLVQQ VLQELQEAVE SEGLEGLVGA ALEAKQVLSS FALPTGREGG 51 100 ENSP00000256362/1-702 PGLQVLEVDS VALSLYPEDA PRNMLPLVCK GEGSLLFEAA SMLLWGDAGL ENSBTAP00000007588/1-700 PGPQVLEVDS VALSLYPEDA PRNMLPLVCQ GEGSLLFEAA SLLLWGDAGL bmy_10180T0/1-713 PGPQVLEVDS VALSLYPEDA PRNMLPLVCK GEGSLLFEAA SMLLWGDAGL BACU010808/1-713 PGPQVLEVDS VALSLYPEDA PRNMLPLVCK GEGSLLFEAA SMLLWGDAGL 101 150 ENSP00000256362/1-702 SLELRARTVV EMLLHRHYYL QGMIDSKVML QAVRYSLCSE ESPEMTSLPP ENSBTAP00000007588/1-700 SLELRARTVV EMLLHRHYYL QGMIDSKVML QAVRYSLRSE ESPEMTSLPS bmy_10180T0/1-713 SLELRARTVV EMLLHRHYYL QGMIDSKVML QAVRYSLCSE ESPEMTSLPS BACU010808/1-713 SLELRARTVV EMLLHRHYYL QGMIDSKVML QAVRYSLCSE ESPEMTSLPS 151 200 ENSP00000256362/1-702 ATLEAIFDAD VKASCFPSSF SNVWHLYALA SVLQRNIYSI YPMRNLKIRP ENSBTAP00000007588/1-700 ATLEAIFDAD VKATCFPSSF SNVWHLYALA SVVQRNIYSI YPLRNLKIRP bmy_10180T0/1-713 ATLEAIFDAD VKATCFPSSF SNVWHLYALA SVLQRNIYSI YPLRNLKIRP BACU010808/1-713 ATLEAIFDAD VKATCFPSSF SNVWHLYALA SVLQRNIYSI YPLRNLKIRP 201 250 ENSP00000256362/1-702 YFNRVIRPRR CDHVPSTLHI MWAGQPLTSH FFRHQYFAPV VGLEEVEAEG ENSBTAP00000007588/1-700 YFNRVIRPRR CDHTPATLHI MWAGQPLSGH LFRHQYFAPV VGLEEVEAES bmy_10180T0/1-713 YFNRVIRPRR CDHMPATLHI MWAGQPLTSQ LFRHQYFAPV VGLEEVEAEG BACU010808/1-713 YFNRVIRPRR CDHMPATLHI MWAGQPLTSQ LFRHQYFAPV VGLEEVEAES 251 300 ENSP00000256362/1-702 A-PGVAPALP ALAPLSSPAK TLELLNREPG LSYSHLCERY SVTKSTFYRW ENSBTAP00000007588/1-700 AHPGP----- --APLPPPAK TLELLNREPG LSYSHLGEHS SVTKSTFYRW bmy_10180T0/1-713 ASPGLAPTPA ALAPLPPPAK TLELLNREPG LSYSHLGERY SVTKSTFYRW BACU010808/1-713 ASPGLAPTPA ALAPLPPPAK TLELLNREPG LSYSHLGERY SVTKSTFYRW 301 350 ENSP00000256362/1-702 RRQSQEHRQK VAARFSAKHF LQDSFHRGGV VPLQQFLQRF PEISRSTYYA ENSBTAP00000007588/1-700 RRQSQEHRQK VATRFSAKHF LQDSFHRGGV VPLQQFLQRF PEISRSTYYA bmy_10180T0/1-713 RRQSQEHRQK VATRFSAKHF LQDSFHRGGV VPLQQFLQRF PEISRSTYYA BACU010808/1-713 RRQSQEHRQR VATRFSAKHF LQDSFHRGGV VPLQQFLQRF PEISRSTYYA 351 400 ENSP00000256362/1-702 WKHELLGSGT CPALPPREVL GMEELEKLPE EQVAEEELEC SALAVSSPGM ENSBTAP00000007588/1-700 WKHELVGSGA CQALTP---- -TEELTKLPE RQVA-EGLGC SSTAASSPGV bmy_10180T0/1-713 WKHELLGSGA CRALAPKEEL AMEELEKLPA EQVA-KGLGC SSSAMSSPGM BACU010808/1-713 WKHELLGSGA CRALAPKEEL AMEELEKLPV EQAA-KGLGC SSSAMSSPGM 401 450 ENSP00000256362/1-702 VLMQRAKLYL EHCISLNTLV PYRCFKRRFP GISRSTYYNW RRKALRRNPS ENSBTAP00000007588/1-700 VFMQRAKLYL EHCIALNTLV PYRCFKRRFP GISRSTYYNW RRKALRRNPS bmy_10180T0/1-713 VLMQRAKLYL EHCISLNTLV PYRCFKRRFP GISRSTYYNW RRKALRRNPS BACU010808/1-713 VLMQRAKLYL EHCISLNTLV PYRCFKRRFP GISRSTYYNW RRKALRRNPS 451 500 ENSP00000256362/1-702 FKPAPALSAA GTPQLASVGE GAVIPWK-SE AEEGAGNATG EDPPAPGELL ENSBTAP00000007588/1-700 FKPVPALLES GPPQPVPVGE KALLPWKGGE VGEGAAKATG GGPPAPRAFL bmy_10180T0/1-713 FKPAPALSVA GASQPASVGE KALLPWK-GE AGEGAGKATG GGSPAPREFL BACU010808/1-713 FKPAPALSVA GASQPASVGE KALLPWK-GE AGEGAGKATG GGSPAPREFL 501 550 ENSP00000256362/1-702 PLRMPLSRWQ RRLRRAARRQ VLSGHLPFCR FRLRYPSLSP SAFWVWKSLA ENSBTAP00000007588/1-700 PLRVPLSRWQ RRLRRAARKQ VLGGHLPFCR FRLRYPSLSP SSFWVWKSLA bmy_10180T0/1-713 PLRMPLSRWQ RRLRRAARKQ VLSGHLPFCR FRLRYPSLSP STFWVWKSLA BACU010808/1-713 PLRMPLSRWQ RRLRRAARKQ VLSGHLPFCR FRLRYPSLSP STFWVWKSLA 551 600 ENSP00000256362/1-702 RGWPRGLSKL QVPVPTLGKG G-QEAEEKQE KEAGRDVTAV MAPPVGA--- ENSBTAP00000007588/1-700 RSWPGSLSKL HIPAPTLGRG SRKEAE---E KEAGRNVIAA VAPPEGTWPM bmy_10180T0/1-713 RGWPRSLSKL QIQAPSLGKG GMKEAEEKRE KEVGRNVTAA MVPPAGTLQM BACU010808/1-713 RGWPRSLSKL QIQAPSLGKG GMKEAEEKRE KEAGRNVTAA MVPPAGTLQM 601 650 ENSP00000256362/1-702 ------SSED VEGGPSREGA LQEGATAQGQ PHSGPLLSQP VV--AAAGGR ENSBTAP00000007588/1-700 AASPGQDPRK ATGGPSREGA LQEGPTAQGR PPSGSLSSHP VVTAAAAGGR bmy_10180T0/1-713 AASPGEDPGK AQGGPSREGA LQEGATAQGR PPSGSLSSHP VV-AAAAGGR BACU010808/1-713 AASPGEDPGK AQGGPSREGA LQEGSTAQGR PPSGSLSSHP VV-AAAAGGR 651 700 ENSP00000256362/1-702 DGRMLVMDMI ATTKFKAQAK LFLQKRFQSK SFPSYKEFSA LFPLTARSTY ENSBTAP00000007588/1-700 DGQVLVMDML ATTKFKAQAK LFLQKRFQSK SFPSYKEFST LFPLTARSTY bmy_10180T0/1-713 DGQVLVMDML ATTKFKAQAK LFLQKRFQSK SFPSYKEFSA LFPLTARSTY BACU010808/1-713 DGQVLVMDML ATTKFKAQAK LFLQKRFQSK SFPSYKEFSA LFPLTARSTY 701 750 ENSP00000256362/1-702 YMWKRALYDG LTLVDG ENSBTAP00000007588/1-700 YMWKRALYDG LTLVDG bmy_10180T0/1-713 YMWKRALYDG LTLVDG BACU010808/1-713 YMWKRALYDG LTLVDG