KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:32:25 2014 Check: 00 .. Name: BACU003463/1-81 Len: 298 Check: 245 Weight: 1.00 Name: ENSP00000366390/1-293 Len: 298 Check: 7916 Weight: 1.00 Name: bmy_10211T0/1-278 Len: 298 Check: 6192 Weight: 1.00 Name: ENSBTAP00000007590/1-291 Len: 298 Check: 7814 Weight: 1.00 // 1 50 BACU003463/1-81 ---------- ---------M SDAQDPATIP AVGTQVNLRG WSRRGEGGES ENSP00000366390/1-293 MLWAIPELGS PCPISISYEM SDSQDPTTSP VVTTQVELGG CSRQGGGNGF bmy_10211T0/1-278 ---------- ---------M SDAQDPATIP AVGTQVKLRG WSRQGEGGES ENSBTAP00000007590/1-291 FLYRSPCPTP PHPPPTPQEM SNAQDPATVP GADTQVKLRG WSQQGEGDES 51 100 BACU003463/1-81 FHFRRHQELQ AFLNLLG--- ---------- ---------- ---------- ENSP00000366390/1-293 LRFRQHQEVQ AFLSLLEDSF VQEFLSKDPC FQISDKYLLA MVLVYFQRAH bmy_10211T0/1-278 FHFRRHQELQ AFLNLLEHSF LQDFLSKDPC FQISDKYLLA MVLVYFQRAN ENSBTAP00000007590/1-291 SHLRRHQELR AFLHLLEHSF LQDFLSKDPC FQISDKYLLA MVLVYFRRAN 101 150 BACU003463/1-81 ---------- ---------- ---------- ---------- ---------- ENSP00000366390/1-293 LKLSEYTHSS LFLALYLAND MEEDLEGPKC EIFPWALGKD WCLRVGKFLH bmy_10211T0/1-278 LQLSEYTHSN LFLALYLAND MEEDLEDPKS VIFLWALGQD WHRRVSDFLR ENSBTAP00000007590/1-291 LQLSEYTHSN LFLALYLAND MEEDLEDPKS VIFLWALGQD WHHQVSDFLH 151 200 BACU003463/1-81 ---------- ---------- ---------- ---------- ---------- ENSP00000366390/1-293 QRDKLWARMG FRAVVSRQCC EEVMAKEPFH WAWTRDRRPH HGGVQRVCPQ bmy_10211T0/1-278 QRDKLWARMG FRAVVRRQSC EEVMAKEPTH WAWTRERHPH HGRAQRSYPK ENSBTAP00000007590/1-291 QRDKLWARMG FRAVVRRQSC EEVMAKEPTH WAWTRERHPH HGRAQRSYPK 201 250 BACU003463/1-81 --LPMPPAPS SQPAT----- --------CT HSDLTPQINS CP-RDTNCA- ENSP00000366390/1-293 VPVRLPRGPG LSPPHCSPCG LPQH----CS SHLLKPVSSK CPSLTSECHR bmy_10211T0/1-278 AQIPLPRGPG LSPPHCPLCG LPPCRSHRCH HPCPLPVISK CPSQNPERHR ENSBTAP00000007590/1-291 AQIPLPRGPG LSPPHCPLCA LPPHSSLCCH HPRPLPVLSK CLSYNAEWHR 251 300 BACU003463/1-81 ---------- ---------- ---------- ---------- -------- ENSP00000366390/1-293 PPSQNYLSRV KNAWGGDFLI VLPPQMQLEP GTYSLRIFPK PPARPGH- bmy_10211T0/1-278 PPSQACLSVA GDSWSGAFLI VLPTQLQLEP GTYTLHIFSK LLPCPRR- ENSBTAP00000007590/1-291 PTSQAW---- --PWSRGFLI VLPTQLLLEP GTYTLHRLP- MPPAPSSQ