KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:28 2014 Check: 00 .. Name: BACU012374/1-422 Len: 471 Check: 6575 Weight: 1.00 Name: bmy_12662T0/1-450 Len: 471 Check: 57 Weight: 1.00 Name: ENSP00000392466/1-411 Len: 471 Check: 3506 Weight: 1.00 Name: ENSBTAP00000007599/1-467 Len: 471 Check: 3262 Weight: 1.00 Name: ENSTTRP00000014183/1-197 Len: 471 Check: 137 Weight: 1.00 // 1 50 BACU012374/1-422 ---------- ---------- ---------- ---------M SKNQMRHFF- bmy_12662T0/1-450 ---------- --HRAKAGPG RRRGQRGPRA AAAAHARPVP ARGGHRDLAG ENSP00000392466/1-411 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007599/1-467 PDRLLAAARG RLHRAEAGPG RRRGQRGPRA AAAAHARPVP ARGGHRDSAG ENSTTRP00000014183/1-197 ---------- ---------- ---------- ---------- ---------- 51 100 BACU012374/1-422 -----KTRIP RSLSSRGCSS KSFKLYSPKE PPNGNAFPPF HPGTMLDRDV bmy_12662T0/1-450 PSAAGDVKMS VGCACPGCSS KSFKLYSPKE PPNGNAFPPF HPGTMLDRDV ENSP00000392466/1-411 --------MS VGCACPGCSS KSFKLYSPKE PPNGNAFPPF HPGTMLDRDV ENSBTAP00000007599/1-467 PPAAGDVKMS VGCACPECKS RENLCFLPTP PPTNNCYPA- -PGNVLVISV ENSTTRP00000014183/1-197 ---------- ---------- ---------- ---------- ---------- 101 150 BACU012374/1-422 GPTPMYPPTY LEPGIGRHTP YGNQTDYRIF ELNKRLQNWT EECDNLWWDA bmy_12662T0/1-450 GPTPMYPPTY LEPGIGRHTP YGNQTDYRIF ELNKRLQNWT EECDNLWWDA ENSP00000392466/1-411 GPTPMYPPTY LEPGIGRHTP YGNQTDYRIF ELNKRLQNWT EECDNLWWDA ENSBTAP00000007599/1-467 GPCRMYPPTY LEPGIGRHTP YGNQTDYRIF ELNKRLQNWT EECDNLWWDA ENSTTRP00000014183/1-197 ---------- ---------- ---------- ---------- ---------- 151 200 BACU012374/1-422 FTTEFFEDDA MLTITFCLED GPKRYTIGRT LIPRYFRSIF EGGATELYYV bmy_12662T0/1-450 FTTEFFEDDA MLTITFCLED GPKRYTIGRT LIPRYFRSIF EGGATELYYV ENSP00000392466/1-411 FTTEFFEDDA MLTITFCLED GPKRYTIGRT LIPRYFRSIF EGGATELYYV ENSBTAP00000007599/1-467 FTTEFFEDDA MLTITFCLED GPKRYTIGRT LIPRYFRSIF EGGATELYYV ENSTTRP00000014183/1-197 ---------- ---------- ---------- ---------- ---------- 201 250 BACU012374/1-422 LKHPKEAFHS NFVSLDCDQG SMVTQHGKPM FTQVCVEGRL YLEFMFDDMM bmy_12662T0/1-450 LKHPKEAFHS NFVSLDCDQG SMVTQHGKPM FTQVCVEGRL YLEFMFDDMM ENSP00000392466/1-411 LKHPKEAFHS NFVSLDCDQG SMVTQHGKPM FTQVCVEGRL YLEFMFDDMM ENSBTAP00000007599/1-467 LKHPKEAFHS NFVSLDCDQG SMVTQHGKPM FTQVCVEGRL YLEFMFDDMM ENSTTRP00000014183/1-197 ---------- ---------- ---------- ---------- ---------- 251 300 BACU012374/1-422 RIKTWHFSIR QHRELIPRSI LAMHAQDPQM LDQLSKNITR CGLSNSTLNY bmy_12662T0/1-450 RIKTWHFSIR QHRELIPRSI LAMH-----M LDQLSKNITR CGLSNSTLNY ENSP00000392466/1-411 RIKTWHFSIR QHRELIPRSI LAMHAQDPQM LDQLSKNITR CGLSNSTLNY ENSBTAP00000007599/1-467 RIKTWHFSIR QHRELIPRSI LAMHAQDPQM LDQLSKNITR CGLSNSTLNY ENSTTRP00000014183/1-197 ---------- ---------- --MHAQDPQM LDQLSKNITR CGLSNSTLNY 301 350 BACU012374/1-422 LRLCVILEPM QELMSRHKTY SLSPRDCLKT CLFQKWQRMV APP--AEPAR bmy_12662T0/1-450 LRLCVILEPM QELMSRHKTY SLSPRDCLKT CLFQKWQRMV APP--AEPAR ENSP00000392466/1-411 LRLCVILEPM QELMSRHKTY SLSPRDCLKT CLFQKWQRMV APP--AEPTR ENSBTAP00000007599/1-467 LRLCVILEPM QELMSRHKTY SLSPRDCLKT CLFQKWQRMV APPGTAEPAR ENSTTRP00000014183/1-197 LRLCVILEPM QELMSRHKTY SLSPRDCLKT CLFQKWQRMV APP--AEPAR 351 400 BACU012374/1-422 QQPSKRRKRK MSGGSTMSSG GGNTNNSNSK KKSPASTFAL SSQ--DVMVV bmy_12662T0/1-450 QQPSKRRKRK MSGGSTMSSG GGNTNNSNSK KKSPASTFAL SSQ--DVMVV ENSP00000392466/1-411 QQPSKRRKRK MSGGSTMSSG GGNTNNSNSK KKSPASTFAL SSQVPDVMVV ENSBTAP00000007599/1-467 QQPSKRRKRK MSGGSTMSSG GGNTNNSNSK KKSPASTFAL SSQ--DVMVV ENSTTRP00000014183/1-197 QQPSKRRKRK MSGGSTMSSG GGNTNNSNSK KKSPASTFAL SSQVPDVMVV 401 450 BACU012374/1-422 GEPTLMGGEF GDEDERLITR LENTQFDAAN GIDDEDSFNN SPALGANSPW bmy_12662T0/1-450 GEPTLMGGEF GDEDERLITR LENTQFDAAN GIDDEDSFNN SPALGANSPW ENSP00000392466/1-411 GEPTLMGGEF GDEDERLITR LENTQFDAAN GIDDEDSFNN SPALGANSPW ENSBTAP00000007599/1-467 GEPTLMGGEF GDEDERLITR LENTQFDAAN GIDDEDSFNN SPALGANSPW ENSTTRP00000014183/1-197 GEPTLMGGEF GDEDERLITR LENTQFDAAN GIDDEDSFNN SPALGVNSSW 451 500 BACU012374/1-422 NSKPPSSQES KSENPTSQAS Q bmy_12662T0/1-450 NSKPPSSQES KSENPTSQAS Q ENSP00000392466/1-411 NSKPPSSQES KSENPTSQAS Q ENSBTAP00000007599/1-467 NSKPPSSQES KSENPTSQAS Q ENSTTRP00000014183/1-197 NSKPPSSQES KSENLTSQVS Q