KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:29 2014 Check: 00 .. Name: ENSP00000359664/1-385 Len: 386 Check: 5491 Weight: 1.00 Name: ENSBTAP00000007603/1-377 Len: 386 Check: 4176 Weight: 1.00 Name: ENSTTRP00000011740/1-328 Len: 386 Check: 3370 Weight: 1.00 Name: bmy_22171T0/1-301 Len: 386 Check: 5391 Weight: 1.00 Name: BACU004602/1-170 Len: 386 Check: 1651 Weight: 1.00 // 1 50 ENSP00000359664/1-385 MSRPQLRR-W RLVSSPPSGV PGLALLALLA LLALRLAAGT DCPCPEPELC ENSBTAP00000007603/1-377 MARLQLAGSR RLVPL-PRRA PRLAPLLLPL LLALPDGARA DCPCKVPALC ENSTTRP00000011740/1-328 MAWPQLRC-W RLVPS-LHGT LGLAPLLLPL LLALRVGLGA DCQCQAPALC bmy_22171T0/1-301 -----LRS-R RLVPS-LRGA PGLAPL-LPL PLALRVGLGA DRPCQAPALC BACU004602/1-170 MAWPQLRS-R RLVPS-LRGA PGLAPLLLPL LLALRIGLGA DRPCQAPALC 51 100 ENSP00000359664/1-385 RPIRHHPDFE VFVFDVGQKT WKSYDWSQIT TVATFGKYDS ELMCYAHSKG ENSBTAP00000007603/1-377 RPITHRPDFE VFVFNVGHKT WKYYDWSQIT TVVLFSNYDP ELMCHAHAKG ENSTTRP00000011740/1-328 RPITHRSDFE ---------- ---------- ---------- ---------- bmy_22171T0/1-301 RPITHRPDFE VFVFDVGHKT WKYYDWSQIT TVVLFSNYDS ELMCYAHSKG BACU004602/1-170 LPITHRPDFE ---------- ---------- ---------- ---------- 101 150 ENSP00000359664/1-385 ARVVLKGDVS LKDIIDPAFR ASWIAQKLNL AKTQYMDGIN IDIEQEVNCL ENSBTAP00000007603/1-377 ARVVLKGDVP VKDIINATFR ASWIAQQVKL AKTQYMDGIN LDIEQDVAHS ENSTTRP00000011740/1-328 -------DVS IRDIINATLR ASWLAQQVKL AKTQYMDGIN L---QEVARS bmy_22171T0/1-301 ARVVLKGEL- ---------- ---------- ---QFLPDVS ---------- BACU004602/1-170 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000359664/1-385 SPEYDALTAL VKETTDSFHR EIEGSQVTFD VAWSPKNIDR RCYNYTGIAD ENSBTAP00000007603/1-377 SPEYYALTAL VKETTDSFHH EIKGSQVTFD VPWGPNCVGA RCYNYTGIAD ENSTTRP00000011740/1-328 SHEYYALTAL VKETADSFHH EIEGSQVTFD VSWSPNCLGR RCYNYTGIAD bmy_22171T0/1-301 ---------- ---------- ---------- -----KLIGR RCYNYTGIAD BACU004602/1-170 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000359664/1-385 ACDFLFVMSY DEQSQIWSEC IAAANAPYNQ TLTGYNDYIK MSINPKKLVM ENSBTAP00000007603/1-377 ACDFLFVMSY DERCLACSQC IAGANSPYIQ TLTGYDDFIK IGINPKKLVM ENSTTRP00000011740/1-328 ACDFLFVMSY GERSLVWSQC IAGANSPYTK TLTGYDDYIK IGINPKKLVM bmy_22171T0/1-301 ACDFLFVMSY GERSLVWSQC VAGANSPYTK TLTGYDDYIK IGINPKKLVM BACU004602/1-170 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000359664/1-385 GVPWYGYDYT CLNLSEDHVC TIAKVPFRGA PCSDAAGRQV PYKTIMKQIN ENSBTAP00000007603/1-377 GIPWYGYDFT CQNLSVDHVC TTAKY----- PCRDAVHHQV TYQKIMKQVN ENSTTRP00000011740/1-328 GIPWYGYDYT CQNLSVNHVC TTAKY----- PCKDAVYRQV AYQMIMKQVN bmy_22171T0/1-301 GIPWYGYDYT CQNLSANHVC TTAKY----- PCKDAVYRQV AYQMIMKQVN BACU004602/1-170 ---------- ------NHVC TTAKY----- PCKDAVYRQV AYQMIMKQVN 301 350 ENSP00000359664/1-385 SSISGNLWDK DQRAPYYNYK DPAGHFHQVW YDNPQSISLK ATYIQNYRLR ENSBTAP00000007603/1-377 SSTSGRLWDK NQQSPYYHYK DQAGHFHQVW YDDPQSISLK ASYVQKRGIL ENSTTRP00000011740/1-328 SSTSGRLWDK IQQSPYYHYQ DQAGHFHQVW YDDPQSISLK AAYVQNRGLL bmy_22171T0/1-301 SSTSGRLWDK NQQSPYYHYQ DQAGHFHQVW YDDPQSISLK AAYVQNRGLL BACU004602/1-170 SSTSGRLWDK NQQSPYYHCE DQAGHFHQVW YDDPQSISLK AAYVQNRGLL 351 400 ENSP00000359664/1-385 GIGMWNANCL DYSGDAVAKQ QTEEMWEVLK PKLLQR ENSBTAP00000007603/1-377 GIGMWHANCL DYSGDAIARQ QTEEMWKALK PNL--- ENSTTRP00000011740/1-328 GIGMWHANCL DYSGDAIDKQ QTEEMWKALK PKL-QR bmy_22171T0/1-301 GIGMWHANCL DYSGDAIAKQ QTEEMWKALK PKL--- BACU004602/1-170 GIGMWHANCL DYSGDAIAKQ QTEEVWKALK TKL---