KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:29 2014 Check: 00 .. Name: bmy_20876T0/1-226 Len: 457 Check: 7241 Weight: 1.00 Name: ENSP00000264538/1-429 Len: 457 Check: 4583 Weight: 1.00 Name: ENSBTAP00000007606/1-429 Len: 457 Check: 4483 Weight: 1.00 Name: BACU012309/1-427 Len: 457 Check: 2025 Weight: 1.00 Name: ENSTTRP00000015674/1-427 Len: 457 Check: 2085 Weight: 1.00 // 1 50 bmy_20876T0/1-226 -----MHQHK SGIESALKET KGITA----- ---------- ---------- ENSP00000264538/1-429 MTAALAVVTT SGLEDGVPRS RGEGTGEVVL ERGPGAAYHM FVVMEDLVEK ENSBTAP00000007606/1-429 MAAAAAVVTP SGLEDEVSRS RGEGAGEMVV ERGPGAAYHM FVVMEDLVEK BACU012309/1-427 --MAAAVVTP SGLEDGVSRS RGEGAGEAVV ERGPGAAYHM FVVMEDLVEK ENSTTRP00000015674/1-427 --MAAAVVTP SGLEDGVSRS RGEGAGEAVV ERGPGAAYHM FVVMEDLVEK 51 100 bmy_20876T0/1-226 ---------- ---------- ---------P GQQ------- ---------- ENSP00000264538/1-429 LKLLRYEEEF LRKSNLKAPS RHYFALPTNP GEQFYMFCTL AAWLINKAGR ENSBTAP00000007606/1-429 LKLLRYEENL LRKNNLKPPS RHYFALPTNP GEQFYMFCTL AAWLINKAGR BACU012309/1-427 LKLLRYEEDL LRKNNLKPPS RHYFALPTNP GEQFYMFCTL AAWLINKAGR ENSTTRP00000015674/1-427 LKLLRYEEDL LRKNNLKPPS RHYFALPTNP GEQFYMFFTL AAWLINKAGH 101 150 bmy_20876T0/1-226 ---------- ---------- ---------- ----RLEPTA SQACC----- ENSP00000264538/1-429 PFEQPQEYDD PNATISNILS ELRSFGRTAD FPPSKLKSGY GEHVCYVLDC ENSBTAP00000007606/1-429 PFEQPQEYDD PNAIISNILS ELRSFGRTAD FPPSKLKSGY GEHVCYVLDC BACU012309/1-427 PFEQPQEYDD PNATISNILS ELRSFGRTAD FPPSKLKSGY GAHVCYVLDC ENSTTRP00000015674/1-427 PFEQPQEYDD PNATISNILS ELRSFGRTAD FAPSKLKSGY GAHVCYVLDC 151 200 bmy_20876T0/1-226 ---------- ---------- ---------- ---------- ---------- ENSP00000264538/1-429 FAEEALKYIG FTWKRPIYPV EELEEESVAE DDAELTLNKV DEEFVEEETD ENSBTAP00000007606/1-429 LAEEALKYIG FTWKRPAYPV EELEEETVAE DDAELTLNKV DEEFVEEETD BACU012309/1-427 LAEEALKYIG FTWKRPTYPV EELEEETVAE DDAELTLNKV DEEFVEEETD ENSTTRP00000015674/1-427 LAEEALKYIG FTWKRPTYPV EELEEETVAE DDAELTLNKV DEEFVEEETD 201 250 bmy_20876T0/1-226 ---------- ---------- --PARNRDF- ---------- ---------- ENSP00000264538/1-429 NEENFIDLNV LKAQTYHLDM NETAKQEDIL ESTTDAAEWS LEVERVLPQL ENSBTAP00000007606/1-429 NEENFIDLNV LKAQTYRLDM NESAKQEDIL ESTTDAAEWS LEVERVLPQL BACU012309/1-427 NEENFIDLSV LKAQTYRLDM NESAKQEDIL ESTTDAAEWS LEVERVLPQL ENSTTRP00000015674/1-427 NEENFIDLSL LKAQTYRLDM NESAKQEDIL ESTTDAAEWN LEVERVLPQL 251 300 bmy_20876T0/1-226 ---------- WRIP----QR SKAG------ ---GFLDKLH NEISRTLEKI ENSP00000264538/1-429 KVTIRTDNKD WRIHVDQMHQ HRSGIESALK ETKGFLDKLH NEITRTLEKI ENSBTAP00000007606/1-429 KVTIRTDNKD WRIHVDQMHQ HKSGIESALK ETKGFLDRLH NEISRTLEKI BACU012309/1-427 KVTIRTDNKD WRIHVDQMHQ HKSGIESALK ETKGFLDKLH NEISRTLEKI ENSTTRP00000015674/1-427 KVTIRTDNKD WRIHVDQMHQ HKSGIESALK ETKGLLDKLH SEISRTLEKI 301 350 bmy_20876T0/1-226 GSREKYINNQ LQHLIQEYRA AQAQLSEQTR LEGEKNGNKL EILPYFQKFS ENSP00000264538/1-429 SSREKYINNQ LENLVQEYRA AQAQLSE--- ---------- ---------- ENSBTAP00000007606/1-429 GSREKYINNQ LEHLVQEYRA AQAQLSE--- ---------- ---------- BACU012309/1-427 GSREKYINNQ LQHLIQEHRA AQAQLSE--- ---------- ---------- ENSTTRP00000015674/1-427 GSREKYINNQ LEHLVQEYRA AQAQLSE--- ---------- ---------- 351 400 bmy_20876T0/1-226 KTKQKARERY QQGNGGVTER TRLLSEVTEE LEKVKQEMEE KGSSMTDGAP ENSP00000264538/1-429 -----AKERY QQGNGGVTER TRLLSEVMEE LEKVKQEMEE KGSSMTDGAP ENSBTAP00000007606/1-429 -----ARERY QQGNGGVTER TRILSEVTEE LEKVKQEMEE KGSSMTDGAP BACU012309/1-427 -----ARERY QQGNGGVTER TRLLSEVTEE LEKVKQEMEE KGNSMTDGAP ENSTTRP00000015674/1-427 -----ARERY QQGNGGVTER TRLLSEVTEE LEKVKQEMEE KGSSMTDGAP 401 450 bmy_20876T0/1-226 LVKIKQSLTK LKQETIQMDI RIGVVEHTLL QSKLKEKSNM TRDMHATIIP ENSP00000264538/1-429 LVKIKQSLTK LKQETVEMDI RIGIVEHTLL QSKLKEKSNM TRNMHATVIP ENSBTAP00000007606/1-429 LVKIKQSLTK LKQETVQMDI RIGVVEHTLL QSKLKEKSNM TRDMHATIIP BACU012309/1-427 LVKIKQSLTK LKQETIQMDI RIGVVEHTLL QSKLKEKSNM TRDMHATIIP ENSTTRP00000015674/1-427 LVKIKQSLTK LKQETIQMDI RIGVVEHTLL QSKLKEKSNM TRDMHATIIP 451 500 bmy_20876T0/1-226 ESAIGSY ENSP00000264538/1-429 EPATGFY ENSBTAP00000007606/1-429 ESAIGSY BACU012309/1-427 ESAIGSY ENSTTRP00000015674/1-427 ESAIGSY