KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:29 2014 Check: 00 .. Name: ENSTTRP00000002913/1-504 Len: 524 Check: 920 Weight: 1.00 Name: ENSP00000347672/1-524 Len: 524 Check: 213 Weight: 1.00 Name: bmy_18907T0/1-268 Len: 524 Check: 2988 Weight: 1.00 Name: BACU018710/1-480 Len: 524 Check: 6405 Weight: 1.00 Name: ENSBTAP00000007608/1-524 Len: 524 Check: 680 Weight: 1.00 // 1 50 ENSTTRP00000002913/1-504 MDTESXXXXX XXXXXXXXXX XXXXERNRER HKSPRNKDGR GSEKSVTIQA ENSP00000347672/1-524 MDTESTYSGY SYYSSHSKKS HRQGERTRER HKSPRNKDGR GSEKSVTIQP bmy_18907T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU018710/1-480 ---------- ---------- ----ERNRER HKSPRNKDGR GSEKSVTIQA ENSBTAP00000007608/1-524 MDTESTYSGY SYYSSHSKKS HRQGERNRER HKSPRNKDGR GSEKSVTIQA 51 100 ENSTTRP00000002913/1-504 PTGEPLLAND STRTEEAQDD NWGETTTAIT GTSEHSISQE DIARISKDME ENSP00000347672/1-524 PTGEPLLGND STRTEEVQDD NWGETTTAIT GTSEHSISQE DIARISKDME bmy_18907T0/1-268 ---------- ---------D LLGKTA---- ---------- ---------- BACU018710/1-480 PTGEPLLAND STRTEEAQDD NWGETTTAIT GTSEHSISQE DIARISKDME ENSBTAP00000007608/1-524 PTGEPLLAND SARTEEAQDD NWGETTTAIT GTSEHSISQE DIARISKDME 101 150 ENSTTRP00000002913/1-504 DSVGLDCRRY LGLTIATVLG LLVFLTPIAF ILLPPILWRE ELEPCGTICE ENSP00000347672/1-524 DSVGLDCKRY LGLTVASFLG LLVFLTPIAF ILLPPILWRD ELEPCGTICE bmy_18907T0/1-268 ---------- ---------- ---------- LILPSF---- ---------- BACU018710/1-480 DSVGLDCRRY LGLTVATVLG LLVFLTPIAF ILLPPILWRE ELEPCGTICE ENSBTAP00000007608/1-524 DSVGLDCRRY LGLTVAAVLG LLVFLTPIAF ILLPPILWRD ELEPCGTICE 151 200 ENSTTRP00000002913/1-504 GLFISMAFKL LILLIGTWAL FFRKQRADVP RILVFRALLL VLIFLFVVSY ENSP00000347672/1-524 GLFISMAFKL LILLIGTWAL FFRKRRADMP RVFVFRALLL VLIFLFVVSY bmy_18907T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU018710/1-480 GLFISMAFKL LILLIGTWAL FFRKQRADVP RIFVFRALLL VLIFLFVVSY ENSBTAP00000007608/1-524 GLFISVAFKL LILLIGTWAL FFRKQRADMP RIFVFRALLL VLIFLFVVSY 201 250 ENSTTRP00000002913/1-504 WLFYGVRILD SRDRNYQGIV QYAVSLVDAL LFIHYLAVVL LELRQLQPMF ENSP00000347672/1-524 WLFYGVRILD SRDRNYQGIV QYAVSLVDAL LFIHYLAIVL LELRQLQPMF bmy_18907T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU018710/1-480 WLFYGVRILD SRDRNYQGIV QYAVSLVDAL LFIHYLAVVL LELRQLQPMF ENSBTAP00000007608/1-524 WLFYGVRILD SRDRNYQGIV QYAVSLVDAL LFIHYLAVVL LELRQLQPMF 251 300 ENSTTRP00000002913/1-504 TLQVVRSTDG ESRFYSFGHL SIQRAALVVL ENYYKDFTIY NPNLLTASKF ENSP00000347672/1-524 TLQVVRSTDG ESRFYSLGHL SIQRAALVVL ENYYKDFTIY NPNLLTASKF bmy_18907T0/1-268 ---------- ---------L SIQRAALVVL ENYYKDFTIY NPNLLTASKF BACU018710/1-480 TLQVVRSTDG ESRFYSFGHL SIQRAALVVL ENYYKDFTIY NPNLLTASKF ENSBTAP00000007608/1-524 TLQVVRSTDG ESRFYSLGTL CIQRAALVVL ENYYKDFTIY NPNLLTASKF 301 350 ENSTTRP00000002913/1-504 RAAKHMAGLK VYNVDXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000347672/1-524 RAAKHMAGLK VYNVDGPSNN ATGQSRAMIA AAARRRDSSH NELYYEEAEH bmy_18907T0/1-268 RAAKHMAGLK VYNVDGPSNN ATGQSRAMIA AAARRRDSSH NELYYEEAEH BACU018710/1-480 RAAKHMAGLK VYNVDGPSNN ATGQSRAMIA AAARRRDSSH NELYYEEAEH ENSBTAP00000007608/1-524 RAAKHMAGLK VYNVDGPSNN ATGQSRAMIA AAARRRDSSH NELYYEEAEH 351 400 ENSTTRP00000002913/1-504 XXXXXXXXXX LVVAVEEAFV HIQRLQAEEQ QKAPGEVMDP REAAQAIFPS ENSP00000347672/1-524 ERRVKKRKAR LVVAVEEAFI HIQRLQAEEQ QKAPGEVMDP REAAQAIFPS bmy_18907T0/1-268 ERRVKKRRAR LVVAVEEAFI HIQRLQAEEQ QKAPGEVMDP REAAQAIFPS BACU018710/1-480 ERRVKKRRAR LVVAVEEAFI HIQRLHAEEQ QKAPGEVMDP REAAQAIFPS ENSBTAP00000007608/1-524 ERRVKKRRAR LVVAVEEAFI HIQRLQAEEQ QKAPGEVMDP REAAQAIFPS 401 450 ENSTTRP00000002913/1-504 MARALQKYLR TTRQQHYHSM ESILQHLAFC ITNSMTPKAF LERYLSTGPT ENSP00000347672/1-524 MARALQKYLR ITRQQNYHSM ESILQHLAFC ITNGMTPKAF LERYLSAGPT bmy_18907T0/1-268 MARALQKYLR TTRQQHYHSM ESILQHLAFC ITNSMTPKAF LERYLSTGPT BACU018710/1-480 MARALQKYLR TTRQQHYHSM ESILQHLAFC ITNSMTPKAF LERYLSTGPT ENSBTAP00000007608/1-524 MARALQKYLR TTRQQNYHSM ESILQHLAFC ITHSMTPKAF LERYLSAGPT 451 500 ENSTTRP00000002913/1-504 LQYDRERWLA MQWRLVSDEA VTSGLRDGLV FVLKCLDFSL VVNVKKIPFI ENSP00000347672/1-524 LQYDKDRWLS TQWRLVSDEA VTNGLRDGIV FVLKCLDFSL VVNVKKIPFI bmy_18907T0/1-268 LQYDRERWLA MQWRLVSDEA VTSGLRDGLV FVLKCLDFSL VVNVKKIPFI BACU018710/1-480 LQYDRERWLA MQWRLVSDEA VTSGLRDGLV FVLKCLDFSL VVNVKKIPFI ENSBTAP00000007608/1-524 LQYDRERWLS TQWRLVSDEA VTNGLRDGLV FVLKCLDFSL VVNVKKIPFI 501 550 ENSTTRP00000002913/1-504 MLSE------ ---------- ---- ENSP00000347672/1-524 ILSEEFIDPK SHKFVLRLQS ETSV bmy_18907T0/1-268 MLSEEFIDPK SHKFVLRLQS ETSV BACU018710/1-480 MLSE------ ---------- ---- ENSBTAP00000007608/1-524 MLSEEFIDPK SHKFVLRLQS ETSV