KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:29 2014 Check: 00 .. Name: BACU004747/1-237 Len: 265 Check: 4320 Weight: 1.00 Name: ENSP00000357787/1-265 Len: 265 Check: 6987 Weight: 1.00 Name: ENSBTAP00000007615/1-264 Len: 265 Check: 7921 Weight: 1.00 Name: bmy_21522T0/1-239 Len: 265 Check: 6696 Weight: 1.00 Name: ENSTTRP00000002973/1-264 Len: 265 Check: 6278 Weight: 1.00 // 1 50 BACU004747/1-237 MKVLLLKDPK EDDCGQDPYI RELGLYGLEA TLIPVLSFEF LSVPSFSEKL ENSP00000357787/1-265 MKVLLLKDAK EDDCGQDPYI RELGLYGLEA TLIPVLSFEF LSLPSFSEKL ENSBTAP00000007615/1-264 MKVLLLKDPK EDDCGQDPYV RELGLYGLEA TLIPVLSFEF LSLPSLSEKL bmy_21522T0/1-239 MKVLLLKDPK EDDCGQDPYI RELGLYGLEA TLIPVLSFEF LSVPSFSEKL ENSTTRP00000002973/1-264 MKVLLLKDPK EDDCGQDPYI RELGLYGLEA TLIPVLSFEF WSLPSFLEKL 51 100 BACU004747/1-237 SHPEGYGGLI FTSPRAVEAV ELCLEKDSKT E--------- ---------- ENSP00000357787/1-265 SHPEDYGGLI FTSPRAVEAA ELCLEQNNKT EVWERSLKEK WNAKSVYVVG ENSBTAP00000007615/1-264 SHPEGYGGLI FTSPRAVEAV ERCLQKDTKA EVWKKSLKEK WNAKSVYVVG bmy_21522T0/1-239 SHPEGYGGLI FTSPRAVEAV ELCLEKDNKT E--------- ---------- ENSTTRP00000002973/1-264 SHPEGYGGLI FTSPRAVEAV ELCLEKDNKT EVWRKSLAEK WNAKSVYVVG 101 150 BACU004747/1-237 ------VNKI GLHTEGENCG NAEKLAEYIC FRESSALPLL FPCGTLKREI ENSP00000357787/1-265 NATASLVSKI GLDTEGETCG NAEKLAEYIC SRESSALPLL FPCGNLKREI ENSBTAP00000007615/1-264 NATASLVNRI GLHTEGETCG NAEKLAEYIC SREPSALPLL FPCGTLKREI bmy_21522T0/1-239 ------VNKI GLHTEGENCG NAEKLAEYIC SRESSALPLL FPCGTLKREI ENSTTRP00000002973/1-264 NATASLVNKI GLHTEGENCG NAGKLAEYIC XXESSALPLL FPCGTLKREI 151 200 BACU004747/1-237 LPKMLKDKGI PVESLTVYKT IPHPGIQGNL NSYYSQQGVP ASITFFSPSG ENSP00000357787/1-265 LPKALKDKGI AMESITVYQT VAHPGIQGNL NSYYSQQGVP ASITFFSPSG ENSBTAP00000007615/1-264 LPKMLKDKGI PLESVTVYQT IPHPGIQGNL TSYYTQQGVP ASITFFSPSG bmy_21522T0/1-239 LPKMLKDKGI PVESLTVYQT IPHPGIQGNL NSYYSQQGIP ASITFFSPSG ENSTTRP00000002973/1-264 LPKMLKDKGI PVESLTVYQT IPHPGIQGNL NSYYSQQGIP ASITFFSPSG 201 250 BACU004747/1-237 LTHSLKHIQE LSGDNIDQIK FVAIGPTTAH ALAAQGLPCK AVFGAHVLRT ENSP00000357787/1-265 LTYSLKHIQE LSGDNIDQIK FAAIGPTTAR ALAAQGLPVS CTAESPTPQA ENSBTAP00000007615/1-264 LTHSLKHIQE LSGDSIGQIK FVAIGPTTAQ ALAAQGLPVS CTAESPTPRA bmy_21522T0/1-239 LTHSLKHIQE LSGDNIDQIK FVAIGPTTAH ALTAQGLPVS CTAESPTPQA ENSTTRP00000002973/1-264 LTHSLKHIQE LSGDNIDQIK FVAIGPTTAH ALAAQGLPVS CTAESPTPQA 251 300 BACU004747/1-237 DKPGMNNKV- --CCV ENSP00000357787/1-265 LATGIRKALQ PHGCC ENSBTAP00000007615/1-264 LAAGIRTTLQ PHAC- bmy_21522T0/1-239 LAAGIRTALQ PHGC- ENSTTRP00000002973/1-264 LAAGIRTALQ SHGC-