KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:30 2014 Check: 00 .. Name: ENSP00000357748/1-322 Len: 334 Check: 5819 Weight: 1.00 Name: ENSTTRP00000002974/1-307 Len: 334 Check: 9662 Weight: 1.00 Name: ENSBTAP00000007617/1-306 Len: 334 Check: 4 Weight: 1.00 Name: bmy_21523T0/1-257 Len: 334 Check: 4671 Weight: 1.00 Name: BACU004748/1-271 Len: 334 Check: 2608 Weight: 1.00 // 1 50 ENSP00000357748/1-322 MASRSKRRAV ESGVPQPPDP PVQRDEEEEK EVENEDEDDD DSDKEKDEED ENSTTRP00000002974/1-307 MASRPKRRAL DGGFSVP--- ---RDEDEDD ELEDEDEDNE DSDEEEDEDD ENSBTAP00000007617/1-306 MASRPKRRA- --VSRVPP-- ---ALGDEEE EDEVEEQDED DSDEEEDEED bmy_21523T0/1-257 --------M- --ATALP--- ---------- ------GPQA PALAPCAADR BACU004748/1-271 ---------- ---------- ---------- ---------- MSGKKLSDNQ 51 100 ENSP00000357748/1-322 EVIDEEVNIE FEAYSLSDND YDGIKKLLQQ LFLKAPVNTA ELTDLLIQQN ENSTTRP00000002974/1-307 EVVNEEVNIE FEAYSISDND YDGIKKLLQQ LFLKAPVNTA ELTDLLIQQN ENSBTAP00000007617/1-306 EVVNEEVNIE FEAYSISDND YDGIKKLLQQ LFLKAPVNTA ELTNLLIQQN bmy_21523T0/1-257 VLVWLEVNIE FEAYSISDND YDGIKKLLQQ ---------- ---------- BACU004748/1-271 ---SHEVNIE FEAYSISDND YDGIKKLLQQ LFLKAPVNTA ELTDLLIQQN 101 150 ENSP00000357748/1-322 HIGSVIKQTD VSEDSNDDMD EDEVFGFISL LNLTERKGTQ CVEQIQELVL ENSTTRP00000002974/1-307 HIGSVIKQTD VSEDSDDDVD EDGIFGFISL LNLTERKGTP FAEQIKEFIL ENSBTAP00000007617/1-306 HIGSVIKQTD VSEDSDDEVD EDEIFGFISL LNLTERKGTP CAEQIKELIL bmy_21523T0/1-257 -------QTD VSEDSDDDVD EDGIFGFISL LNLTERKGTP CAEQIKEFIL BACU004748/1-271 HIGSVIKQTD VSEDSDDDVD EDGIFGFISL LNLTERKGTP CAEQIKEFIL 151 200 ENSP00000357748/1-322 RFCEKNCEKS MVEQLDKFLN DTTKPVGLLL SERFINVPPQ IALPMYQQLQ ENSTTRP00000002974/1-307 RLCEKNCEKS MVEQLDKLFN DATRPVGFLL SERFINIPAQ IALPMHQQLQ ENSBTAP00000007617/1-306 RLCEKNCEKS MVEQLDRLFN DTARPVGFLL SERFINVPPQ IALPMHQQLQ bmy_21523T0/1-257 RLCEKNCEKS MVEQLDKLFN DATRPVGFLL SERFINIPPQ IALPMHQQLQ BACU004748/1-271 HLCEKNCEKS MAEQLDKLFN DATRPVGFLL SERFINVPPQ IALPMHQQLQ 201 250 ENSP00000357748/1-322 KELAGAHRTN KPCGKCYFYL LISKTFVEAG KNNSKKKPSN KKKAALMFAN ENSTTRP00000002974/1-307 KELAEAHKTN KPCGKCSFYL LISKTFVEAG KSNSKKTLSS QKREELMFAN ENSBTAP00000007617/1-306 KELAEAHRAN KPCGKCYFYL LISKTFVEAG KSNSKKKRSN QKKDELMFAN bmy_21523T0/1-257 KELAEAHKTN KPCGKCYFYL LISKTFVEAG KSNSKKKWSS QKKDELMFAN BACU004748/1-271 KELAEAHKTN KPCGKCYFYL LISKTFVEAG KSNSKKKWSS QKKDELMFAN 251 300 ENSP00000357748/1-322 AEEEFFYEEQ GKPEVLGGPD TRRGLEPVPI QHNGGSRGQV TALVSLKAGL ENSTTRP00000002974/1-307 AEEEFFYEIT -------APV PGTGLELVLM QHSRSL--RV ITLGSLNGGL ENSBTAP00000007617/1-306 AEEEFFYEK- ---------- -------AIL KFNYSV--QE ESDTCLGGRW bmy_21523T0/1-257 XEEEFFYEK- ---------- -------AIL KFNYSV--QE ESDTCLGGRW BACU004748/1-271 AEEEFFYEK- ---------- -------AIL KFNYSV--QE ESDTRLGGRW 301 350 ENSP00000357748/1-322 IQSRSTLSDF QGTFMTVGIA LS-------- ---- ENSTTRP00000002974/1-307 IQRSIQTGS- KGTFLMAGIA LSQ------- ---- ENSBTAP00000007617/1-306 SFDDVPMKPL RTVMLIPGDK MSEIMEKLKE HLSV bmy_21523T0/1-257 SFDDVPMKPL RTVMLIPSDK MNEIMDKLKE HLSV BACU004748/1-271 SSDDVPMKPL RTVMVIPSGK MNEIMDKLKE HLSV