KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:33 2014 Check: 00 .. Name: ENSP00000288976/1-806 Len: 806 Check: 6831 Weight: 1.00 Name: ENSBTAP00000007630/1-796 Len: 806 Check: 9131 Weight: 1.00 Name: ENSTTRP00000003394/1-798 Len: 806 Check: 2107 Weight: 1.00 Name: bmy_19859T0/1-761 Len: 806 Check: 6496 Weight: 1.00 Name: BACU009365/1-798 Len: 806 Check: 3940 Weight: 1.00 // 1 50 ENSP00000288976/1-806 MQVQDATRRP SAVRFLSSFL QGRRHSTSDP VLRLQQARRG SGLGSGSATK ENSBTAP00000007630/1-796 --MQDPPRRL SAVPFLSSFF EGRRHSASDP ILRLQQGQR- -----SSAAK ENSTTRP00000003394/1-798 --MQDPPRRL SAVPFLSSFF QGRRHSASDP IVRLQQGRR- -----SSTAK bmy_19859T0/1-761 --MQDPPRRL SAVPFLSSFF QGRRHSASDP ILRLQQGRR- -----SSTAK BACU009365/1-798 --MQDPPRRL SAAPFLSSFF QGRRHSASDP ILRLQQGRR- -----SSTAR 51 100 ENSP00000288976/1-806 LLSSSSLQVM VAVSSVSHAE GNPTFPERKR NLERPTPKYT KVGERLRHVI ENSBTAP00000007630/1-796 VLSSSSLQVM VAMSSVSCAE RNPTCPERKR NSGRPTPKYT KVGERLRHVI ENSTTRP00000003394/1-798 MLSSSSLQVM VAMSSISCAE RNPTCPERKR NSGRPTPKYT KVGERLRHVI bmy_19859T0/1-761 MLSSSSLQVM VAMSSVSCAE RNPTCPKRKR NSGRPTPKYT KVGERLRHVI BACU009365/1-798 MLSSSSLQVM VAMSSVSCAE RNPTCPKRKR NSGRPTPKYT KVGERLRHVI 101 150 ENSP00000288976/1-806 PGHMACSMAC GGRACKYENP ARWSEQEQAI KGVYSSWVTD NILAMARPSS ENSBTAP00000007630/1-796 PGHVACSMAC GGKACKYENA ARWSEQEQAV KGIYSSWVTD NILAMARPST ENSTTRP00000003394/1-798 PGHMACSMAC GGKACKYENA ARWSEQEQAI KGVYSSWVTD NILAMARPST bmy_19859T0/1-761 PGHMACSMAC GGKACKYENA ARWSEQEQAI KGVYSSWVTD NILAMARPST BACU009365/1-798 PGHMACSMAC GGKACKYENA ARWSEQEQAI KGVYSSWVTD NILAMARPST 151 200 ENSP00000288976/1-806 ELLEKYHIID QFLSHGIKTI INLQRPGEHA SCGNPLEQES GFTYLPEAFM ENSBTAP00000007630/1-796 EVLEKFCIIE QFRSHGIKSI INLQRPGEHA SCGNPLEQES GFTYLPEAFM ENSTTRP00000003394/1-798 ELLEKYCIIE QFRSHGIKSI INLQRPGEHA SCGNPLEQES GFTYLPEAFM bmy_19859T0/1-761 ELLEKYCIIE QFRSHGIKSI INLQRPGEHA SCGNPLEQES GFTYLPEAFM BACU009365/1-798 ELLEKYCIIE QFRSHGIKSI INLQRPGEHA SCGNPLEQES GFTYLPEAFM 201 250 ENSP00000288976/1-806 EAGIYFYNFG WKDYGVASLT TILDMVKVMT FALQEGKVAI HCHAGLGRTG ENSBTAP00000007630/1-796 EAGIYFYNFG WKDYGVASLT TILDMVKVMT FALQEGKVAI HCHAGLGRTG ENSTTRP00000003394/1-798 EAGIYFYNFG WKDYGVASLT TILDMVKVMT FALQEGKVAI HCHAGLGRTG bmy_19859T0/1-761 EAGIYFYNFG WKDYGVASLT TILDMVKVMT FALQEGKVAI HCHAGLGRTG BACU009365/1-798 EAGIYFYNFG WKDYGVASLT TILDMVKVMT FALQEGKVAI HCHAGLGRTG 251 300 ENSP00000288976/1-806 VLIACYLVFA TRMTADQAII FVRAKRPNSI QTRGQLLCVR EFTQFLTPLR ENSBTAP00000007630/1-796 VLIACYLVFA TRMTADQAII FVRAKRPNSI QTRGQLLCVR EFTQFLIPLR ENSTTRP00000003394/1-798 VLIACYLVFA TRMTADQAII FVRAKRPNSI QTRGQLLCVR EFTQFLIPLR bmy_19859T0/1-761 VLIACYLVFA TRMTADQAII FVRAKRPNSI QTRGQLLCVR EFTQFLIPLR BACU009365/1-798 VLIACYLVFA TRMTADQAII FVRAKRPNSI QTRGQLLCVR EFTQFLIPLR 301 350 ENSP00000288976/1-806 NIFSCCDPKA HAVTLPQYLI RQRHLLHGYE ARLLKHVPKI IHLVCKLLLD ENSBTAP00000007630/1-796 NIFSCCDPKA HAVTLAQYLI RQRHLLHGYE ARLLKHIPKI IHLVCKLLLD ENSTTRP00000003394/1-798 NIFSCCDPKA HAVTLAQYLI RQRHLLHGYE ARLLKHVPKI IHLVCKLLLD bmy_19859T0/1-761 NIFSCCDPKA HAVTLAQYLI RQRHLLHGYE ARLLKHVPKI IHLVCKLLLD BACU009365/1-798 NIFSCCDPKA HAVTLAQYLI RQRHLLHGYE ARLLKHVPKI IHLVCKLLLD 351 400 ENSP00000288976/1-806 LAENRPVMMK DVSEGPGLSA EIEKTMSEMV TMQLDKELLR HDSDVSNPPN ENSBTAP00000007630/1-796 LAENRPVVT- EVADIPGLSA EIEKTVSEMI TRQLDKELLR HDSDASDSFT ENSTTRP00000003394/1-798 LAENRPVVTE EVAEVPGLSA EIEKTVSEMV TMQLDKELLR HDSDASDSFT bmy_19859T0/1-761 LAENRPVVTE EVAEVPGLSA EIEKTVSEMV TMQLDKELLR HDSDASDSFT BACU009365/1-798 LAENRPVVTE EVAEVPGLSA EIEKTVSEMV TMQLDKDLLR HDSDTSDSFT 401 450 ENSP00000288976/1-806 PTAVAADFDN RGMIFSNEQQ FDPLWKRRNV ECLQPLTHLK RRLSYSDSDL ENSBTAP00000007630/1-796 PTAVVMDFEN QDVVLSSEQE LDPLWKRRNV ECLQPLAHLK RQLSYSDSDL ENSTTRP00000003394/1-798 PSAVVADFEN QDVILSSEQE FDPLWKRRNV ECLQPLTRLK RQLSYSDSDL bmy_19859T0/1-761 PNAVVADFEN QDVILSSEQE FDPLWKRRNV ECLQPLTRLK RQLSYSDSDL BACU009365/1-798 PNAAVADFEN QDVILSSEQE FDPLWKRRNV ECLQPLTRLK RQLSYSDSDL 451 500 ENSP00000288976/1-806 KRAENLLEQG ETPQTVPAQI LVGHKPRQQK LISHCYIPQS PEPDLHKEAL ENSBTAP00000007630/1-796 KRAESLLEQG RTPWTVPAQA LLCHNPRQQK HISRCYSPQS PQLDLNKETL ENSTTRP00000003394/1-798 KRAESFLEQG RTPWTVPAQA LLCHNPRQQK HISHCYSPQS PQLDLNKETL bmy_19859T0/1-761 KRAESLLEQG RTPWTVPAQA LLCHNPRQQK HISHCYSPQS PQLDLNKETL BACU009365/1-798 KRAESLLEQG RTPWTVPAQA VLCHNPRQQK HISHCYSPQS PQVDLNKETL 501 550 ENSP00000288976/1-806 VRSTLSFWSQ SKFGGLEGLK DNGSPIFHGR IIPKEAQQSG AFSADVSGSH ENSBTAP00000007630/1-796 VRNTFSFWNH TKFGVPEGLK DDGSSIFHRT SIPKEVQRSR TFSSGISDSY ENSTTRP00000003394/1-798 VRSTFSFWNH AKLGGLEGLK DDRSSIFHRT NIPKEVQRSR TFSSGISGSY bmy_19859T0/1-761 VRNTFSFWNH AKFGGLEGLK DDRSSIFHRT NIPKEVQRSR TFSSGISGSY BACU009365/1-798 VRNTFSFWNH AKFGGLEGLK DDRSSIFHRT NIPKEVQRSR TFSSGISGSY 551 600 ENSP00000288976/1-806 SPGEPVSPSF ANVHKDPNPA HQQVSHCQCK THGVGSPGSV RQNSRTPRSP ENSBTAP00000007630/1-796 NPGEPVTPNF ANIPKGPNSS QQKVYHCECE SHGGCGPSSV AEDGETCRRP ENSTTRP00000003394/1-798 NPGEQVTPNF ANIPKELNCS HQQMSHCECE TRGGCSPSSV TEDSETCHHP bmy_19859T0/1-761 NPGEPVTPNF ANIPKELNCS HQQVSHCECE THGGCGPSSV AEDSETCRRP BACU009365/1-798 NPGEPVTPNF ANIPKELNCS HQQVSHCECE THGGCGPSSV AEDSETCHRP 601 650 ENSP00000288976/1-806 LDCGSSPKAQ FLVEHETQDS KDLSEAASHS ALQSELSAEA RRILAAKALA ENSBTAP00000007630/1-796 VDCGSSPKAQ FL-GNETQNS KYLSEVAAHM PLQSELSVEA RRILAAKALA ENSTTRP00000003394/1-798 VDCASSPKAQ FLVGPETQDS KYLSEVAPYT ALHSDLSVEA RRILAAKALA bmy_19859T0/1-761 VDCASSPKAQ FLVGPETRDS KYLSEVAPYT ALQSDLSVEA RRILAAKALA BACU009365/1-798 VECASSPKAQ FLVGPETRDS KYLSEVAPYT ALQSDLSVEA RRILAAKALA 651 700 ENSP00000288976/1-806 NLNESVEKEE LKRKVEMWQK ELNSRDGAWE RICGERDPFI LCSLMWSWVE ENSBTAP00000007630/1-796 NLNEIAEKEE VKKKVEMWQK ELNSRDGAWE RICGEKDPFI LCSLMWSWVE ENSTTRP00000003394/1-798 NLNEIAEKEE VKKKVEMWQK ELNSRDGAWE RICGERDPFI LCSLMWSWVE bmy_19859T0/1-761 NLNEIAEKEE VKKKVEMWQK ELNSRDGAWE RICGERDPFI LCSLMWSWVE BACU009365/1-798 NLNEIAEKEE VKKKVEMWQK ELNSRDGAWE RICGERDPFI LCSLMWSWVE 701 750 ENSP00000288976/1-806 QLKEPVITKE DVDMLVDRRA DAAEALFLLE KGQHQTILCV LHCIVNLQTI ENSBTAP00000007630/1-796 QLKEPVITKE DMDMLVDRCA DASEALFLLE KGQQQTILCV LHCIVSLQTI ENSTTRP00000003394/1-798 QLKEPVITKE DVDMLVDRSA DAAEALFLLE KGQQQTILCV LHCIVSLQMI bmy_19859T0/1-761 QLKEPVITKE DVDMLVDRSA DAAEALFLLE ---------- ---------- BACU009365/1-798 QLKEPVITKE DVDMLVDRSA DAAEALFLLE KGQQQTILCV LHCIVSLQVI 751 800 ENSP00000288976/1-806 PVDVEEAFLA HAIKAFTKVN FDSENGPTVY NTLKKIFKHT LEEKRKMTKD ENSBTAP00000007630/1-796 PADVEEAVLA RAIKAFTKVN FDSENGPIVY NTLKKIFKRT LEEKRKMTKD ENSTTRP00000003394/1-798 PAHVEEAVLA RAIKAFTKVN FDSENGPIVY NTLKKIFKHT LEEKRKMAKD bmy_19859T0/1-761 ---------- -------KVN FDSENGPIVY NTLKKIFKNT LEEKRKMTKD BACU009365/1-798 PANVEEAVLA RAIKAFTKVN FDSENGPIVY NTLKKIFKNT LEEKRKMTKD 801 850 ENSP00000288976/1-806 GPKPGL ENSBTAP00000007630/1-796 NPEPGI ENSTTRP00000003394/1-798 GPKPAI bmy_19859T0/1-761 GPKPGV BACU009365/1-798 GPKPGI